RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 TSPYL1Q9H0U9 437 aa17.81■□□□□ 0.44
SDC2-205ENST00000520233 MRM3Q9HC36 420 aaKnown RBP17.81■□□□□ 0.44
SDC2-205ENST00000520233 SAMD15Q9P1V8 674 aa17.81■□□□□ 0.44
SDC2-205ENST00000520233 RIMKLBQ9ULI2 386 aa17.81■□□□□ 0.44
SDC2-205ENST00000520233 TCAF1Q9Y4C2 921 aa17.81■□□□□ 0.44
SDC2-205ENST00000520233 NCOR1O75376 2440 aa17.81■□□□□ 0.44
SDC2-205ENST00000520233 MROH6A6NGR9 719 aa17.8■□□□□ 0.44
SDC2-205ENST00000520233 C10orf142B7Z368 130 aa17.8■□□□□ 0.44
SDC2-205ENST00000520233 RNGTTO60942 597 aaKnown RBP17.8■□□□□ 0.44
SDC2-205ENST00000520233 C1SP09871 688 aa17.8■□□□□ 0.44
SDC2-205ENST00000520233 MCM3P25205 808 aa17.8■□□□□ 0.44
SDC2-205ENST00000520233 RPS21P63220 83 aaKnown RBP17.8■□□□□ 0.44
SDC2-205ENST00000520233 CRADDP78560 199 aa17.8■□□□□ 0.44
SDC2-205ENST00000520233 PDIA2Q13087 525 aaKnown RBP17.8■□□□□ 0.44
SDC2-205ENST00000520233 ANGPT1Q15389 498 aa17.8■□□□□ 0.44
SDC2-205ENST00000520233 SLC36A4Q6YBV0 504 aa17.8■□□□□ 0.44
SDC2-205ENST00000520233 CCNI2Q6ZMN8 369 aaPredicted RBP17.8■□□□□ 0.44
SDC2-205ENST00000520233 CEP128Q6ZU80 1094 aa17.8■□□□□ 0.44
SDC2-205ENST00000520233 TRIM69Q86WT6 500 aa17.8■□□□□ 0.44
SDC2-205ENST00000520233 HORMAD1Q86X24 394 aa17.8■□□□□ 0.44
SDC2-205ENST00000520233 FAM160A2Q8N612 972 aaPredicted RBP17.8■□□□□ 0.44
SDC2-205ENST00000520233 FRMD1Q8N878 549 aa17.8■□□□□ 0.44
SDC2-205ENST00000520233 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.8■□□□□ 0.446e-6■□□□□ 8.8
SDC2-205ENST00000520233 EID2BQ96D98 161 aa17.8■□□□□ 0.44
SDC2-205ENST00000520233 FMO2Q99518 471 aa17.8■□□□□ 0.44
SDC2-205ENST00000520233 KIFC1Q9BW19 673 aa17.8■□□□□ 0.44
SDC2-205ENST00000520233 PCED1AQ9H1Q7 454 aa17.8■□□□□ 0.44
SDC2-205ENST00000520233 IL17CQ9P0M4 197 aa17.8■□□□□ 0.44
SDC2-205ENST00000520233 SOX13Q9UN79 622 aa17.8■□□□□ 0.44
SDC2-205ENST00000520233 ZFR2Q9UPR6 939 aaKnown RBP17.8■□□□□ 0.44
SDC2-205ENST00000520233 ARL5AQ9Y689 179 aa17.8■□□□□ 0.44
SDC2-205ENST00000520233 A0A1W2PQU0 124 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 RGSL1A5PLK6 1076 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 FAM47DPA6NHR8 397 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 GALR2O43603 387 aaPredicted RBP17.79■□□□□ 0.44
SDC2-205ENST00000520233 NDUFS2O75306 463 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 SLC4A1P02730 911 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 TUBBP07437 444 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 C6P13671 934 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 CREB5Q02930 508 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 TMEM259Q4ZIN3 620 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 CCDC38Q502W7 563 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 TSTD2Q5T7W7 516 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 CASC4Q6P4E1 433 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 HSD11B1LQ7Z5J1 315 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 CCNJLQ8IV13 435 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 STYXQ8WUJ0 223 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 PEX13Q92968 403 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 STAMBPL1Q96FJ0 436 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 COQ10AQ96MF6 247 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 EBNA1BP2Q99848 306 aaKnown RBP17.79■□□□□ 0.44
SDC2-205ENST00000520233 NAT9Q9BTE0 207 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 GPR174Q9BXC1 333 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 C1QTNF2Q9BXJ5 285 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 PARD6BQ9BYG5 372 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 CHRAC1Q9NRG0 131 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 RAD18Q9NS91 495 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 PKD2L2Q9NZM6 624 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 MBD1Q9UIS9 605 aaPredicted RBP17.79■□□□□ 0.44
SDC2-205ENST00000520233 INVSQ9Y283 1065 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 PKP3Q9Y446 797 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 KCTD3Q9Y597 815 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 MAD1L1Q9Y6D9 718 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 TEX264Q9Y6I9 313 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 KMT2EQ8IZD2 1858 aa17.79■□□□□ 0.44
SDC2-205ENST00000520233 FAM237BA0A1B0GVD1 139 aa17.78■□□□□ 0.44
SDC2-205ENST00000520233 PRR23AA6NEV1 266 aa17.78■□□□□ 0.44
SDC2-205ENST00000520233 IGLON5A6NGN9 336 aa17.78■□□□□ 0.44
SDC2-205ENST00000520233 STX7O15400 261 aaKnown RBP17.78■□□□□ 0.44
SDC2-205ENST00000520233 BUD23O43709 281 aaKnown RBP17.78■□□□□ 0.44
SDC2-205ENST00000520233 LZTS3O60299 673 aaPredicted RBP17.78■□□□□ 0.44
SDC2-205ENST00000520233 BANF1O75531 89 aa17.78■□□□□ 0.44
SDC2-205ENST00000520233 TM7SF2O76062 418 aa17.78■□□□□ 0.44
SDC2-205ENST00000520233 SP9P0CG40 484 aa17.78■□□□□ 0.44
SDC2-205ENST00000520233 GM2AP17900 193 aa17.78■□□□□ 0.44
SDC2-205ENST00000520233 PSMA3P25788 255 aa17.78■□□□□ 0.44
SDC2-205ENST00000520233 ELK3P41970 407 aa17.78■□□□□ 0.44
SDC2-205ENST00000520233 CCR5P51681 352 aa17.78■□□□□ 0.44
SDC2-205ENST00000520233 ZNF140P52738 457 aaPredicted RBP17.78■□□□□ 0.44
SDC2-205ENST00000520233 PPP2CBP62714 309 aa17.78■□□□□ 0.44
SDC2-205ENST00000520233 VSNL1P62760 191 aa17.78■□□□□ 0.44
SDC2-205ENST00000520233 PPP2CAP67775 309 aa17.78■□□□□ 0.44
SDC2-205ENST00000520233 NAA30Q147X3 362 aaPredicted RBP17.78■□□□□ 0.44
SDC2-205ENST00000520233 ACOX1Q15067 660 aa17.78■□□□□ 0.44
SDC2-205ENST00000520233 AGERQ15109 404 aa17.78■□□□□ 0.44
SDC2-205ENST00000520233 SKIDA1Q1XH10 827 aa17.78■□□□□ 0.44
SDC2-205ENST00000520233 SEL1L3Q68CR1 1132 aa17.78■□□□□ 0.44
SDC2-205ENST00000520233 KIAA0895LQ68EN5 471 aa17.78■□□□□ 0.44
SDC2-205ENST00000520233 TECPR1Q7Z6L1 1165 aa17.78■□□□□ 0.44
SDC2-205ENST00000520233 CCDC25Q86WR0 208 aa17.78■□□□□ 0.44
SDC2-205ENST00000520233 NRSN1Q8IZ57 195 aa17.78■□□□□ 0.44
SDC2-205ENST00000520233 CADM4Q8NFZ8 388 aa17.78■□□□□ 0.44
SDC2-205ENST00000520233 OR4K2Q8NGD2 314 aa17.78■□□□□ 0.44
SDC2-205ENST00000520233 ASB12Q8WXK4 309 aa17.78■□□□□ 0.44
SDC2-205ENST00000520233 C6orf106Q9H6K1 298 aaPredicted RBP17.78■□□□□ 0.44
SDC2-205ENST00000520233 SAYSD1Q9NPB0 183 aa17.78■□□□□ 0.44
SDC2-205ENST00000520233 NLE1Q9NVX2 485 aaPredicted RBP17.78■□□□□ 0.44
SDC2-205ENST00000520233 KCTD5Q9NXV2 234 aa17.78■□□□□ 0.44
SDC2-205ENST00000520233 TRIOO75962 3097 aa17.77■□□□□ 0.44
SDC2-205ENST00000520233 WNT9AO14904 365 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms