RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 CD86P42081 329 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 ACADVLP49748 655 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 SKOR1P84550 965 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 SEMG2Q02383 582 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 PPARDQ03181 441 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 DPTQ07507 201 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 ADCY2Q08462 1091 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 PNCKQ6P2M8 343 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 ZNF765Q7L2R6 523 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 NLRP8Q86W28 1048 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 GALNT15Q8N3T1 639 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 FSTL5Q8N475 847 aaPredicted RBP12.79□□□□□ -0.36
CLCN3-210ENST00000515420 RNF10Q8N5U6 811 aaKnown RBP12.79□□□□□ -0.36
CLCN3-210ENST00000515420 SPDYE1Q8NFV5 336 aaPredicted RBP12.79□□□□□ -0.36
CLCN3-210ENST00000515420 LRRN4Q8WUT4 740 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 TADA1Q96BN2 335 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 TEKT5Q96M29 485 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 WDR92Q96MX6 357 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 QKIQ96PU8 341 aaKnown RBP eCLIP12.79□□□□□ -0.36
CLCN3-210ENST00000515420 ADGRE3Q9BY15 652 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 SLC13A1Q9BZW2 595 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 WDR26Q9H7D7 661 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 UCKL1Q9NWZ5 548 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 KLF15Q9UIH9 416 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 AMFRQ9UKV5 643 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 CHKBQ9Y259 395 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 DGKBQ9Y6T7 804 aa12.79□□□□□ -0.36
CLCN3-210ENST00000515420 CEP295Q9C0D2 2601 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 MACROD2A1Z1Q3 448 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 CACNB4O00305 520 aaPredicted RBP12.78□□□□□ -0.36
CLCN3-210ENST00000515420 TRIM38O00635 465 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 SIGLEC6O43699 453 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 KRT86O43790 486 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 RASGRP1O95267 797 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 PYGLP06737 847 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 PTPN3P26045 913 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 HK3P52790 923 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 NOMO1Q15155 1222 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 ELOCQ15369 112 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 ZNF542PQ5EBM4 170 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 LRRC66Q68CR7 880 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 ZCCHC8Q6NZY4 707 aaKnown RBP12.78□□□□□ -0.36
CLCN3-210ENST00000515420 CRTC1Q6UUV9 634 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 KDM7AQ6ZMT4 941 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 TMPRSS7Q7RTY8 843 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 PEX26Q7Z412 305 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 TECPR1Q7Z6L1 1165 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 NRSN1Q8IZ57 195 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 CHCHD4Q8N4Q1 142 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 UBL4BQ8N7F7 174 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 PNPLA1Q8N8W4 532 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 PLA2G15Q8NCC3 412 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 LPCAT1Q8NF37 534 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 TRIB3Q96RU7 358 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 FERMT1Q9BQL6 677 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 DESI2Q9BSY9 194 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 OSBPL8Q9BZF1 889 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 GLOD4Q9HC38 313 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 SEPT10Q9P0V9 454 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 SAE1Q9UBE0 346 aaPredicted RBP12.78□□□□□ -0.36
CLCN3-210ENST00000515420 KLQ9UEF7 1012 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 OR1A2Q9Y585 309 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 ADGRG1Q9Y653 693 aa12.78□□□□□ -0.36
CLCN3-210ENST00000515420 CHD8Q9HCK8 2581 aa12.77□□□□□ -0.36
CLCN3-210ENST00000515420 KNTC1P50748 2209 aa12.77□□□□□ -0.36
CLCN3-210ENST00000515420 A8MX80 341 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 ANKRD66B4E2M5 251 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 LMO7DNF2Z398 122 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 K7ESM1 405 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 FFAR2O15552 330 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 TOP3BO95985 862 aaKnown RBP12.77□□□□□ -0.37
CLCN3-210ENST00000515420 GP1BAP07359 652 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 ALPIP09923 528 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 MYCLP1P12525 358 aaPredicted RBP12.77□□□□□ -0.37
CLCN3-210ENST00000515420 CKMT1AP12532 417 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 CTPS1P17812 591 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 ETV3P41162 512 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 DUSP3P51452 185 aaPredicted RBP12.77□□□□□ -0.37
CLCN3-210ENST00000515420 STC1P52823 247 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 SRP54P61011 504 aaKnown RBP12.77□□□□□ -0.37
CLCN3-210ENST00000515420 PTSQ03393 145 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 WASHC5Q12768 1159 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 SMAD1Q15797 465 aaKnown RBP12.77□□□□□ -0.37
CLCN3-210ENST00000515420 PRRT3Q5FWE3 981 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 FAXCQ5TGI0 409 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 LVRNQ6Q4G3 990 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 Q6ZVL8 140 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 HSD11B1LQ7Z5J1 315 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 TSPAN33Q86UF1 283 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 ZC3H18Q86VM9 953 aaKnown RBP12.77□□□□□ -0.37
CLCN3-210ENST00000515420 TMPRSS12Q86WS5 348 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 RBFAQ8N0V3 343 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.77□□□□□ -0.37
CLCN3-210ENST00000515420 OR56A4Q8NGH8 313 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 LMX1AQ8TE12 382 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 HTR3CQ8WXA8 447 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 ALG3Q92685 438 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 FUBP1Q96AE4 644 aaKnown RBP12.77□□□□□ -0.37
CLCN3-210ENST00000515420 AGAP3Q96P47 875 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 SRPK1Q96SB4 655 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms