RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 TMEM202A6NGA9 273 aa24.51■■□□□ 1.51
SNF8-213ENST00000514929 KCNK1O00180 336 aa24.51■■□□□ 1.51
SNF8-213ENST00000514929 PSMD11O00231 422 aa24.51■■□□□ 1.51
SNF8-213ENST00000514929 JCHAINP01591 159 aa24.51■■□□□ 1.51
SNF8-213ENST00000514929 CELA2BP08218 269 aaPredicted RBP24.51■■□□□ 1.51
SNF8-213ENST00000514929 HOXC4P09017 264 aaPredicted RBP24.51■■□□□ 1.51
SNF8-213ENST00000514929 ZFXP17010 805 aaPredicted RBP24.51■■□□□ 1.51
SNF8-213ENST00000514929 TRIM23P36406 574 aa24.51■■□□□ 1.51
SNF8-213ENST00000514929 ETV3P41162 512 aa24.51■■□□□ 1.51
SNF8-213ENST00000514929 PPIDQ08752 370 aaKnown RBP24.51■■□□□ 1.51
SNF8-213ENST00000514929 GUSBP11Q6P575 273 aa24.51■■□□□ 1.51
SNF8-213ENST00000514929 NYAP1Q6ZVC0 841 aa24.51■■□□□ 1.51
SNF8-213ENST00000514929 HSD11B1LQ7Z5J1 315 aa24.51■■□□□ 1.51
SNF8-213ENST00000514929 CCDC170Q8IYT3 715 aa24.51■■□□□ 1.51
SNF8-213ENST00000514929 DCBLD1Q8N8Z6 715 aa24.51■■□□□ 1.51
SNF8-213ENST00000514929 MAPK15Q8TD08 544 aa24.51■■□□□ 1.51
SNF8-213ENST00000514929 OR1E3Q8WZA6 343 aa24.51■■□□□ 1.51
SNF8-213ENST00000514929 DTD2Q96FN9 168 aa24.51■■□□□ 1.51
SNF8-213ENST00000514929 MRFAP1L1Q96HT8 127 aa24.51■■□□□ 1.51
SNF8-213ENST00000514929 LUC7LQ9NQ29 371 aaKnown RBP24.51■■□□□ 1.51
SNF8-213ENST00000514929 CHKBQ9Y259 395 aa24.51■■□□□ 1.51
SNF8-213ENST00000514929 DMXL2Q8TDJ6 3036 aa24.5■■□□□ 1.51
SNF8-213ENST00000514929 EME2A4GXA9 379 aaPredicted RBP24.5■■□□□ 1.51
SNF8-213ENST00000514929 GOLGA6CA6NDK9 693 aa24.5■■□□□ 1.51
SNF8-213ENST00000514929 GOLGA6BA6NDN3 693 aa24.5■■□□□ 1.51
SNF8-213ENST00000514929 PDE2AO00408 941 aaPredicted RBP24.5■■□□□ 1.51
SNF8-213ENST00000514929 LCA5LO95447 670 aa24.5■■□□□ 1.51
SNF8-213ENST00000514929 GOLGA6DP0CG33 693 aa24.5■■□□□ 1.51
SNF8-213ENST00000514929 CYLC1P35663 651 aaPredicted RBP24.5■■□□□ 1.51
SNF8-213ENST00000514929 AP1B1Q10567 949 aa24.5■■□□□ 1.51
SNF8-213ENST00000514929 Q6ZVL8 140 aa24.5■■□□□ 1.51
SNF8-213ENST00000514929 GKN2Q86XP6 184 aa24.5■■□□□ 1.51
SNF8-213ENST00000514929 SLC35F3Q8IY50 421 aa24.5■■□□□ 1.51
SNF8-213ENST00000514929 PELI3Q8N2H9 469 aa24.5■■□□□ 1.51
SNF8-213ENST00000514929 CBARPQ8N350 705 aaPredicted RBP24.5■■□□□ 1.51
SNF8-213ENST00000514929 SDR16C5Q8N3Y7 309 aa24.5■■□□□ 1.51
SNF8-213ENST00000514929 ARRDC2Q8TBH0 407 aa24.5■■□□□ 1.51
SNF8-213ENST00000514929 LGR4Q9BXB1 951 aa24.5■■□□□ 1.51
SNF8-213ENST00000514929 TDRD1Q9BXT4 1180 aaKnown RBP24.5■■□□□ 1.51
SNF8-213ENST00000514929 FGF22Q9HCT0 170 aa24.5■■□□□ 1.51
SNF8-213ENST00000514929 PHPT1Q9NRX4 125 aaPredicted RBP24.5■■□□□ 1.51
SNF8-213ENST00000514929 GOLGA6AQ9NYA3 693 aa24.5■■□□□ 1.51
SNF8-213ENST00000514929 MOSPD1Q9UJG1 213 aa24.5■■□□□ 1.51
SNF8-213ENST00000514929 PCDHA13Q9Y5I0 950 aa24.5■■□□□ 1.51
SNF8-213ENST00000514929 DGKBQ9Y6T7 804 aa24.5■■□□□ 1.51
SNF8-213ENST00000514929 ZZEF1O43149 2961 aa24.5■■□□□ 1.51
SNF8-213ENST00000514929 A0A0J9YYE9 177 aa24.49■■□□□ 1.51
SNF8-213ENST00000514929 PPP1R12AO14974 1030 aaPredicted RBP24.49■■□□□ 1.51
SNF8-213ENST00000514929 TRBC1P01850 177 aa24.49■■□□□ 1.51
SNF8-213ENST00000514929 HADHBP55084 474 aaKnown RBP24.49■■□□□ 1.51
SNF8-213ENST00000514929 DYNLT1P63172 113 aa24.49■■□□□ 1.51
SNF8-213ENST00000514929 NIPAL4Q0D2K0 466 aa24.49■■□□□ 1.51
SNF8-213ENST00000514929 IHHQ14623 411 aa24.49■■□□□ 1.51
SNF8-213ENST00000514929 PDK1Q15118 436 aa24.49■■□□□ 1.51
SNF8-213ENST00000514929 KCTD16Q68DU8 428 aa24.49■■□□□ 1.51
SNF8-213ENST00000514929 LVRNQ6Q4G3 990 aa24.49■■□□□ 1.51
SNF8-213ENST00000514929 NPNTQ6UXI9 565 aa24.49■■□□□ 1.51
SNF8-213ENST00000514929 RBM15Q96T37 977 aaKnown RBP eCLIP24.49■■□□□ 1.511e-7■■■□□ 16.3
SNF8-213ENST00000514929 NRSN2Q9GZP1 204 aa24.49■■□□□ 1.51
SNF8-213ENST00000514929 MRPL40Q9NQ50 206 aaKnown RBP24.49■■□□□ 1.51
SNF8-213ENST00000514929 GULP1Q9UBP9 304 aa24.49■■□□□ 1.51
SNF8-213ENST00000514929 AK5Q9Y6K8 562 aa24.49■■□□□ 1.51
SNF8-213ENST00000514929 LRP4O75096 1905 aa24.49■■□□□ 1.51
SNF8-213ENST00000514929 MYLKQ15746 1914 aa24.49■■□□□ 1.51
SNF8-213ENST00000514929 TNFRSF10CO14798 259 aa24.48■■□□□ 1.51
SNF8-213ENST00000514929 MYCLP1P12525 358 aaPredicted RBP24.48■■□□□ 1.51
SNF8-213ENST00000514929 IFI35P80217 286 aaPredicted RBP24.48■■□□□ 1.51
SNF8-213ENST00000514929 LRRC66Q68CR7 880 aa24.48■■□□□ 1.51
SNF8-213ENST00000514929 CRTC1Q6UUV9 634 aa24.48■■□□□ 1.51
SNF8-213ENST00000514929 MFSD7Q6UXD7 560 aa24.48■■□□□ 1.51
SNF8-213ENST00000514929 HEATR4Q86WZ0 1026 aa24.48■■□□□ 1.51
SNF8-213ENST00000514929 NAT6Q93015 286 aa24.48■■□□□ 1.51
SNF8-213ENST00000514929 DEPDC7Q96QD5 511 aa24.48■■□□□ 1.51
SNF8-213ENST00000514929 SMIM14Q96QK8 99 aa24.48■■□□□ 1.51
SNF8-213ENST00000514929 PCDH9Q9HC56 1237 aa24.48■■□□□ 1.51
SNF8-213ENST00000514929 CYP4F12Q9HCS2 524 aa24.48■■□□□ 1.51
SNF8-213ENST00000514929 SIRPGQ9P1W8 387 aa24.48■■□□□ 1.51
SNF8-213ENST00000514929 PADI4Q9UM07 663 aa24.48■■□□□ 1.51
SNF8-213ENST00000514929 TFR2Q9UP52 801 aa24.48■■□□□ 1.51
SNF8-213ENST00000514929 RAXQ9Y2V3 346 aa24.48■■□□□ 1.51
SNF8-213ENST00000514929 ALG6Q9Y672 507 aa24.48■■□□□ 1.51
SNF8-213ENST00000514929 A0A0U1RQS6 177 aa24.47■■□□□ 1.51
SNF8-213ENST00000514929 PSTPIP1O43586 416 aa24.47■■□□□ 1.51
SNF8-213ENST00000514929 ZNF30P17039 623 aa24.47■■□□□ 1.51
SNF8-213ENST00000514929 CD86P42081 329 aa24.47■■□□□ 1.51
SNF8-213ENST00000514929 RPL26P61254 145 aaKnown RBP24.47■■□□□ 1.51
SNF8-213ENST00000514929 ZBTB17Q13105 803 aa24.47■■□□□ 1.51
SNF8-213ENST00000514929 CDCP2Q5VXM1 449 aa24.47■■□□□ 1.51
SNF8-213ENST00000514929 RAET1GQ6H3X3 334 aa24.47■■□□□ 1.51
SNF8-213ENST00000514929 ARL10Q8N8L6 244 aa24.47■■□□□ 1.51
SNF8-213ENST00000514929 LPCAT1Q8NF37 534 aa24.47■■□□□ 1.51
SNF8-213ENST00000514929 PANX2Q96RD6 677 aa24.47■■□□□ 1.51
SNF8-213ENST00000514929 CEP41Q9BYV8 373 aa24.47■■□□□ 1.51
SNF8-213ENST00000514929 GOLPH3Q9H4A6 298 aa24.47■■□□□ 1.51
SNF8-213ENST00000514929 SEPT10Q9P0V9 454 aa24.47■■□□□ 1.51
SNF8-213ENST00000514929 DNPEPQ9ULA0 475 aa24.47■■□□□ 1.51
SNF8-213ENST00000514929 RPL26L1Q9UNX3 145 aaKnown RBP24.47■■□□□ 1.51
SNF8-213ENST00000514929 GPR34Q9UPC5 381 aa24.47■■□□□ 1.51
SNF8-213ENST00000514929 KNTC1P50748 2209 aa24.47■■□□□ 1.51
SNF8-213ENST00000514929 CAPN8A6NHC0 703 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms