RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 BTN2A2Q8WVV5 523 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 SPOCK2Q92563 424 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 HAUS1Q96CS2 278 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 SCRN2Q96FV2 425 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 WDR92Q96MX6 357 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 OLFM3Q96PB7 478 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 MCCC1Q96RQ3 725 aaPredicted RBP13.3□□□□□ -0.28
RNF4-215ENST00000511843 IL12RB2Q99665 862 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 TDRD1Q9BXT4 1180 aaKnown RBP13.3□□□□□ -0.28
RNF4-215ENST00000511843 BRD8Q9H0E9 1235 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 FGF22Q9HCT0 170 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 GOLGA6AQ9NYA3 693 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 SIRPGQ9P1W8 387 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 SPASTQ9UBP0 616 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 KLQ9UEF7 1012 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 CD84Q9UIB8 345 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 EPN1Q9Y6I3 576 aaPredicted RBP13.3□□□□□ -0.28
RNF4-215ENST00000511843 CSNK1G3Q9Y6M4 447 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 KIF26BQ2KJY2 2108 aa13.3□□□□□ -0.28
RNF4-215ENST00000511843 A0A0U1RQJ8 604 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 A0A1W2PQ67 120 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 CPED1A4D0V7 1026 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 TRABD2BA6NFA1 517 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 TAF4O00268 1085 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 TOR1BO14657 336 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 YY2O15391 372 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 PSTPIP1O43586 416 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 CST8O60676 142 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 RASGRP1O95267 797 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 CAPNS1P04632 268 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 C1SP09871 688 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 JUPP14923 745 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 HTR1BP28222 390 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 KIAA1024LP59773 190 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 IFI35P80217 286 aaPredicted RBP13.29□□□□□ -0.28
RNF4-215ENST00000511843 SKOR1P84550 965 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 TARDBPQ13148 414 aaKnown RBP eCLIP13.29□□□□□ -0.28
RNF4-215ENST00000511843 ARHGEF7Q14155 803 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 PDK1Q15118 436 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 ESRP1Q6NXG1 681 aaKnown RBP13.29□□□□□ -0.28
RNF4-215ENST00000511843 ZCCHC8Q6NZY4 707 aaKnown RBP13.29□□□□□ -0.28
RNF4-215ENST00000511843 KDELC2Q7Z4H8 507 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 DAAM2Q86T65 1068 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 TMPRSS12Q86WS5 348 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 HEATR4Q86WZ0 1026 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 VSIG1Q86XK7 387 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 TMTC1Q8IUR5 882 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 CCDC50Q8IVM0 306 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 SLC35F3Q8IY50 421 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 CBARPQ8N350 705 aaPredicted RBP13.29□□□□□ -0.28
RNF4-215ENST00000511843 PTCD2Q8WV60 388 aaKnown RBP13.29□□□□□ -0.28
RNF4-215ENST00000511843 DTD2Q96FN9 168 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 AGAP3Q96P47 875 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 RBM15Q96T37 977 aaKnown RBP eCLIP13.29□□□□□ -0.28
RNF4-215ENST00000511843 LACRTQ9GZZ8 138 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 WDR26Q9H7D7 661 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 PCDH9Q9HC56 1237 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 MOSPD1Q9UJG1 213 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 PPIL1Q9Y3C6 166 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 KNTC1P50748 2209 aa13.29□□□□□ -0.28
RNF4-215ENST00000511843 A0A0A6YYK5 440 aaPredicted RBP13.28□□□□□ -0.28
RNF4-215ENST00000511843 A0A0J9YYE9 177 aa13.28□□□□□ -0.28
RNF4-215ENST00000511843 CAPN8A6NHC0 703 aa13.28□□□□□ -0.28
RNF4-215ENST00000511843 F5H423 210 aaPredicted RBP13.28□□□□□ -0.28
RNF4-215ENST00000511843 CACNB4O00305 520 aaPredicted RBP13.28□□□□□ -0.28
RNF4-215ENST00000511843 TRBC1P01850 177 aa13.28□□□□□ -0.28
RNF4-215ENST00000511843 ANXA6P08133 673 aa13.28□□□□□ -0.28
RNF4-215ENST00000511843 CTSEP14091 401 aa13.28□□□□□ -0.28
RNF4-215ENST00000511843 TRIM23P36406 574 aa13.28□□□□□ -0.28
RNF4-215ENST00000511843 GALNT3Q14435 633 aa13.28□□□□□ -0.28
RNF4-215ENST00000511843 TAZQ16635 292 aa13.28□□□□□ -0.28
RNF4-215ENST00000511843 PERM1Q5SV97 790 aa13.28□□□□□ -0.28
RNF4-215ENST00000511843 RAET1GQ6H3X3 334 aa13.28□□□□□ -0.28
RNF4-215ENST00000511843 C11orf63Q6NUN7 778 aa13.28□□□□□ -0.28
RNF4-215ENST00000511843 TMEM139Q8IV31 216 aa13.28□□□□□ -0.28
RNF4-215ENST00000511843 SFTPA2Q8IWL1 248 aa13.28□□□□□ -0.28
RNF4-215ENST00000511843 FAM181AQ8N9Y4 354 aa13.28□□□□□ -0.28
RNF4-215ENST00000511843 OR56A4Q8NGH8 313 aa13.28□□□□□ -0.28
RNF4-215ENST00000511843 SPATA22Q8NHS9 363 aa13.28□□□□□ -0.28
RNF4-215ENST00000511843 CCL4L1Q8NHW4 92 aa13.28□□□□□ -0.28
RNF4-215ENST00000511843 IFI44Q8TCB0 444 aa13.28□□□□□ -0.28
RNF4-215ENST00000511843 SCAMP4Q969E2 229 aa13.28□□□□□ -0.28
RNF4-215ENST00000511843 HERPUD2Q9BSE4 406 aa13.28□□□□□ -0.28
RNF4-215ENST00000511843 DESI2Q9BSY9 194 aa13.28□□□□□ -0.28
RNF4-215ENST00000511843 ANP32EQ9BTT0 268 aa13.28□□□□□ -0.28
RNF4-215ENST00000511843 DUSP23Q9BVJ7 150 aa13.28□□□□□ -0.28
RNF4-215ENST00000511843 HEMGNQ9BXL5 484 aa13.28□□□□□ -0.28
RNF4-215ENST00000511843 CYP4F12Q9HCS2 524 aa13.28□□□□□ -0.28
RNF4-215ENST00000511843 TRIM10Q9UDY6 481 aa13.28□□□□□ -0.28
RNF4-215ENST00000511843 DOLKQ9UPQ8 538 aa13.28□□□□□ -0.28
RNF4-215ENST00000511843 hCG_1818297A0A087WSY0 165 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 TMEM8BA6NDV4 472 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 SRRM3A6NNA2 597 aaPredicted RBP13.27□□□□□ -0.29
RNF4-215ENST00000511843 LMO7DNF2Z398 122 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 PPP1R12AO14974 1030 aaPredicted RBP13.27□□□□□ -0.29
RNF4-215ENST00000511843 OPA1O60313 960 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 CLDN7O95471 211 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 SOD1P00441 154 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 TNFP01375 233 aa13.27□□□□□ -0.29
RNF4-215ENST00000511843 FUCA1P04066 466 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms