RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 OR2AP1Q8NGE2 309 aa12.75□□□□□ -0.37
NELFE-209ENST00000488426 GDAP1Q8TB36 358 aa12.75□□□□□ -0.37
NELFE-209ENST00000488426 SPOCK2Q92563 424 aa12.75□□□□□ -0.37
NELFE-209ENST00000488426 CABS1Q96KC9 395 aa12.75□□□□□ -0.37
NELFE-209ENST00000488426 SRPK1Q96SB4 655 aaKnown RBP12.75□□□□□ -0.37
NELFE-209ENST00000488426 TM6SF2Q9BZW4 377 aa12.75□□□□□ -0.37
NELFE-209ENST00000488426 MLXIPLQ9NP71 852 aa12.75□□□□□ -0.37
NELFE-209ENST00000488426 HACD3Q9P035 362 aa12.75□□□□□ -0.37
NELFE-209ENST00000488426 FBXO10Q9UK96 956 aa12.75□□□□□ -0.37
NELFE-209ENST00000488426 PIAS3Q9Y6X2 628 aa12.75□□□□□ -0.37
NELFE-209ENST00000488426 R4GN57 208 aa12.75□□□□□ -0.37
NELFE-209ENST00000488426 GOLGA8TH3BQL2 631 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 NDUFAB1O14561 156 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 TPP1O14773 563 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 RPP40O75818 363 aaKnown RBP12.74□□□□□ -0.37
NELFE-209ENST00000488426 NFATC1O95644 943 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 GSRP00390 522 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 PDHA1P08559 390 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 ADH5P11766 374 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 CRHR1P34998 444 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 GRIA4P48058 902 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 CCT5P48643 541 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 PRAMEP78395 509 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 ECT2LQ008S8 904 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 ARMC12Q5T9G4 340 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 ZNF470Q6ECI4 717 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 FSTL4Q6MZW2 842 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 C22orf39Q6P5X5 142 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 LVRNQ6Q4G3 990 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 TSSK4Q6SA08 328 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 ZC3HC1Q86WB0 502 aaKnown RBP12.74□□□□□ -0.37
NELFE-209ENST00000488426 DCLK2Q8N568 766 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 PCDH20Q8N6Y1 951 aaKnown RBP12.74□□□□□ -0.37
NELFE-209ENST00000488426 WFIKKN2Q8TEU8 576 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 DNASE1L2Q92874 299 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 ATP2A3Q93084 1043 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 CLDN23Q96B33 292 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 CHFRQ96EP1 664 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 MYO19Q96H55 970 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 VPS39Q96JC1 886 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 TUBGCP5Q96RT8 1024 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 CCT8L2Q96SF2 557 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 GPR22Q99680 433 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 ATP13A3Q9H7F0 1226 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 PCMTD2Q9NV79 361 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 GGT7Q9UJ14 662 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 DMXL1Q9Y485 3027 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 C2orf81A6NN90 581 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 CLGNO14967 610 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 HTRA2O43464 458 aaPredicted RBP12.74□□□□□ -0.37
NELFE-209ENST00000488426 ZNF821O75541 412 aaPredicted RBP12.74□□□□□ -0.37
NELFE-209ENST00000488426 PGLSO95336 258 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 DHRS4L1P0CG22 281 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 NBL1P41271 181 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 SLC1A2P43004 574 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 CTSOP43234 321 aaPredicted RBP12.74□□□□□ -0.37
NELFE-209ENST00000488426 VASPP50552 380 aaPredicted RBP12.74□□□□□ -0.37
NELFE-209ENST00000488426 ZNF140P52738 457 aaPredicted RBP12.74□□□□□ -0.37
NELFE-209ENST00000488426 BCL2L1Q07817 233 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 GAS6Q14393 721 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 PDK4Q16654 411 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 QPCTQ16769 361 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 DGKKQ5KSL6 1271 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 NAIF1Q69YI7 327 aaPredicted RBP12.74□□□□□ -0.37
NELFE-209ENST00000488426 ZNF852Q6ZMS4 543 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 RGS9BPQ6ZS82 235 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 GLT6D1Q7Z4J2 308 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 ADIPOR2Q86V24 386 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 HDAC10Q969S8 669 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 E2F7Q96AV8 911 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 PAIP2Q9BPZ3 127 aaKnown RBP12.74□□□□□ -0.37
NELFE-209ENST00000488426 VPS11Q9H270 941 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 TRPV5Q9NQA5 729 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 NLE1Q9NVX2 485 aaPredicted RBP12.74□□□□□ -0.37
NELFE-209ENST00000488426 C2orf42Q9NWW7 574 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 FBXO5Q9UKT4 447 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 PLLPQ9Y342 182 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 SPO11Q9Y5K1 396 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 ARL5AQ9Y689 179 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 GVINP1Q7Z2Y8 2422 aa12.74□□□□□ -0.37
NELFE-209ENST00000488426 GLRA3O75311 464 aa12.73□□□□□ -0.37
NELFE-209ENST00000488426 AHSGP02765 367 aa12.73□□□□□ -0.37
NELFE-209ENST00000488426 PRKCGP05129 697 aa12.73□□□□□ -0.37
NELFE-209ENST00000488426 MPOP05164 745 aa12.73□□□□□ -0.37
NELFE-209ENST00000488426 PIRTP0C851 137 aa12.73□□□□□ -0.37
NELFE-209ENST00000488426 SP9P0CG40 484 aa12.73□□□□□ -0.37
NELFE-209ENST00000488426 POLR2EP19388 210 aaKnown RBP12.73□□□□□ -0.37
NELFE-209ENST00000488426 DRD4P21917 467 aa12.73□□□□□ -0.37
NELFE-209ENST00000488426 TYK2P29597 1187 aa12.73□□□□□ -0.37
NELFE-209ENST00000488426 SERPINA4P29622 427 aa12.73□□□□□ -0.37
NELFE-209ENST00000488426 ETV4P43268 484 aa12.73□□□□□ -0.37
NELFE-209ENST00000488426 CD151P48509 253 aa12.73□□□□□ -0.37
NELFE-209ENST00000488426 STK19P49842 368 aaPredicted RBP12.73□□□□□ -0.37
NELFE-209ENST00000488426 EPHB1P54762 984 aa12.73□□□□□ -0.37
NELFE-209ENST00000488426 MTAPQ13126 283 aa12.73□□□□□ -0.37
NELFE-209ENST00000488426 GRM3Q14832 879 aa12.73□□□□□ -0.37
NELFE-209ENST00000488426 INSCQ1MX18 579 aa12.73□□□□□ -0.37
NELFE-209ENST00000488426 MBLAC2Q68D91 279 aa12.73□□□□□ -0.37
NELFE-209ENST00000488426 DENND6AQ8IWF6 608 aa12.73□□□□□ -0.37
NELFE-209ENST00000488426 PLPP6Q8IY26 295 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms