RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 TRAPPC2BP0DI82 140 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 NELFEP18615 380 aaKnown RBP12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 MATN1P21941 496 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 PSMA4P25789 261 aaKnown RBP12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 ARNTP27540 789 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 SSTR3P32745 418 aaPredicted RBP12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 UGT2B10P36537 528 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 SERPINB5P36952 375 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 PRIM2P49643 509 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 HUNKP57058 714 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 POU5F1BQ06416 359 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 UNC5DQ6UXZ4 953 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 PLEKHM3Q6ZWE6 761 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 ZNF438Q7Z4V0 828 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 ZBTB46Q86UZ6 589 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 CCDC185Q8N715 623 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 MFSD2AQ8NA29 543 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 TDRD5Q8NAT2 981 aaKnown RBP12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 FNDC5Q8NAU1 212 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 KCT2Q8NC54 265 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 BEST2Q8NFU1 509 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 MCRS1Q96EZ8 462 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 IL12RB2Q99665 862 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 TINF2Q9BSI4 451 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 MTG1Q9BT17 334 aaPredicted RBP12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 DHRS4Q9BTZ2 278 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 NFKBIZQ9BYH8 718 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 HAPLN2Q9GZV7 340 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 GHITMQ9H3K2 345 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 SDHAF3Q9NRP4 125 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 ASNSD1Q9NWL6 643 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 PPP1R14DQ9NXH3 145 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 MEN1O00255 615 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 BTN3A1O00481 513 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 SNAI1O95863 264 aaPredicted RBP12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 GOT2P00505 430 aaKnown RBP12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 RRM1P23921 792 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 TYK2P29597 1187 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 L1CAMP32004 1257 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 ADCYAP1R1P41586 468 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 TSPAN7P41732 249 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 CARTPTQ16568 116 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 DDR2Q16832 855 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 KIZQ2M2Z5 673 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 C16orf89Q6UX73 402 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 NUDCD3Q8IVD9 361 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 PALM2Q8IXS6 379 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 ZFP90Q8TF47 636 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 SLC20A1Q8WUM9 679 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 ZNF516Q92618 1163 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 DHX38Q92620 1227 aaKnown RBP12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 HTRA1Q92743 480 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 GTF2H4Q92759 462 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 KAT5Q92993 513 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 PTPN18Q99952 460 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 KATNBL1Q9H079 304 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 ADAMTS10Q9H324 1103 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 RNPEPQ9H4A4 650 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 NGRNQ9NPE2 291 aaKnown RBP12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 CD320Q9NPF0 282 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 SLC35C2Q9NQQ7 365 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 TCRBV7S2A1N4TA0A589 114 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 MANSC4A6NHS7 340 aaPredicted RBP12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 ZNF487B1APH4 448 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 HNRNPCL2B2RXH8 293 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 DNALI1O14645 258 aaPredicted RBP12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 BCAS2O75934 225 aaPredicted RBP12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 SGPL1O95470 568 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 C22orf31O95567 290 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 DLGAP3O95886 979 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 INSRRP14616 1297 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 PTPN1P18031 435 aaKnown RBP12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 HLCSP50747 726 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 NME5P56597 212 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 SLC18A2Q05940 514 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 PON2Q15165 354 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 DUSP28Q4G0W2 176 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 LDLRAP1Q5SW96 308 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 TDRD10Q5VZ19 366 aaKnown RBP12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 IZUMO3Q5VZ72 239 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 C16orf46Q6P387 395 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 MPZL3Q6UWV2 235 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 DENND5BQ6ZUT9 1274 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 LYSMD2Q8IV50 215 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 BBS7Q8IWZ6 715 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 OR8K3Q8NH51 312 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 OLIG1Q8TAK6 271 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 TEX47Q8TBZ9 253 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 TRAPPC12Q8WVT3 735 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 CD101Q93033 1021 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 FZD8Q9H461 694 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 C8orf33Q9H7E9 229 aaPredicted RBP12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 ANKHQ9HCJ1 492 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 SAYSD1Q9NPB0 183 aa12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 PRMT7Q9NVM4 692 aaPredicted RBP12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 DUS2Q9NX74 493 aaKnown RBP12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 NOCTQ9UK39 431 aaKnown RBP12.69□□□□□ -0.38
RTFDC1-207ENST00000477573 PHGDHO43175 533 aaKnown RBP12.68□□□□□ -0.38
RTFDC1-207ENST00000477573 KCNH1O95259 989 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms