RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 BUD23O43709 281 aaKnown RBP10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 RNASEH2AO75792 299 aaKnown RBP10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 PRLP01236 227 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 SHBGP04278 402 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 ERVK-10P10266 1014 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 ADRB3P13945 408 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 CD72P21854 359 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 SPRP35270 261 aaPredicted RBP10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 HMGCLP35914 325 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 SPAM1P38567 509 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 GP5P40197 560 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 SATB1Q01826 763 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 ZNF844Q08AG5 666 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 CAMK2GQ13555 558 aaPredicted RBP10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 ACOX1Q15067 660 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 SMAD1Q15797 465 aaKnown RBP10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 ZNF284Q2VY69 593 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 HSP90AA5PQ58FG0 334 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 LRRC66Q68CR7 880 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 ESRP1Q6NXG1 681 aaKnown RBP10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 KIAA1324Q6UXG2 1013 aaKnown RBP10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 CYS1Q717R9 158 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 MARK2Q7KZI7 788 aaKnown RBP10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 PARS2Q7L3T8 475 aaKnown RBP10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 PTAR1Q7Z6K3 402 aaPredicted RBP10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 IQCKQ8N0W5 287 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 SIX5Q8N196 739 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 IL17RCQ8NAC3 791 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 HDAC10Q969S8 669 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 SIPA1Q96FS4 1042 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 TSNARE1Q96NA8 513 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 GABRG3Q99928 467 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 IQCGQ9H095 443 aaKnown RBP10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 RSPH9Q9H1X1 276 aaPredicted RBP10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 PCDH12Q9NPG4 1184 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 B4GALT6Q9UBX8 382 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 PPM1HQ9ULR3 514 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 MMP17Q9ULZ9 603 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 SPO11Q9Y5K1 396 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 MYO10Q9HD67 2058 aa10.28□□□□□ -0.76
PRPF38A-202ENST00000474048 TCF20Q9UGU0 1960 aaKnown RBP10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 GLYATL1P3A0A0U1RQE8 302 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 TCRBV21S2A2A0A5A6 115 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 KANSL1LA0AUZ9 987 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 NPIPB15A6NHN6 443 aaPredicted RBP10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 FAM159BA6NKW6 160 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 HMGB1P1B2RPK0 211 aaPredicted RBP10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 PSMD11O00231 422 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 LDB2O43679 373 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 LZTS3O60299 673 aaPredicted RBP10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 NDUFS3O75489 264 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 TCEA3O75764 348 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 SASH3O75995 380 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 PCDH8O95206 1070 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 CLDN7O95471 211 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 CTSLP07711 333 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 MC4RP32245 332 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 TTPAP49638 278 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 DGKEP52429 567 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 ZNF140P52738 457 aaPredicted RBP10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 CSE1LP55060 971 aaKnown RBP10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 ZBTB16Q05516 673 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 ITGA9Q13797 1035 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 ENPP2Q13822 863 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 EFTUD2Q15029 972 aaKnown RBP eCLIP10.27□□□□□ -0.772e-8■■■■■ 57.6
PRPF38A-202ENST00000474048 SEPT7Q16181 437 aaKnown RBP10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 LRRC73Q5JTD7 316 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 RNF187Q5TA31 235 aaPredicted RBP10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 GRTP1Q5TC63 336 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 LYPLAL1Q5VWZ2 237 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 NEPROQ6NW34 567 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 KIAA0408Q6ZU52 694 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 DPPA4Q7L190 304 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 TAS2R42Q7RTR8 314 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 STRA8Q7Z7C7 330 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 KBTBD6Q86V97 674 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 AGGF1Q8N302 714 aaeCLIP10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 HDDC3Q8N4P3 179 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 MDGA1Q8NFP4 955 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 OR13C4Q8NGS5 318 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 OR4L1Q8NH43 312 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 ZBTB9Q96C00 473 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 MTBPQ96DY7 904 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 ASB2Q96Q27 587 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 MCCC1Q96RQ3 725 aaPredicted RBP10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 LYSMD1Q96S90 227 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 C19orf43Q9BQ61 176 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 WDR83Q9BRX9 315 aaKnown RBP10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 TRIM56Q9BRZ2 755 aaKnown RBP10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 TMEM109Q9BVC6 243 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 C1QTNF7Q9BXJ2 289 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 HDAC8Q9BY41 377 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 CDH19Q9H159 772 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 LMAN1LQ9HAT1 526 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 BPIFA1Q9NP55 256 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 LTB4R2Q9NPC1 389 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 TREX1Q9NSU2 369 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 KCTD5Q9NXV2 234 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 SENP1Q9P0U3 644 aa10.27□□□□□ -0.77
PRPF38A-202ENST00000474048 SLC2A6Q9UGQ3 507 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms