RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 DGKEP52429 567 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 PDIA2Q13087 525 aaKnown RBP9.89□□□□□ -0.83
SF3A1-207ENST00000471342 HIF1AQ16665 826 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 KYNUQ16719 465 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 ZNF284Q2VY69 593 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 BBS9Q3SYG4 887 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 SEL1L3Q68CR1 1132 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 LRRC66Q68CR7 880 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 DENND2CQ68D51 928 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 TSSK4Q6SA08 328 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 NUDT18Q6ZVK8 323 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 Q6ZVL8 140 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 USP30Q70CQ3 517 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 LINC00523Q86TU6 105 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 TTC7BQ86TV6 843 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 CACUL1Q86Y37 369 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 ANKMY2Q8IV38 441 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 RYBPQ8N488 228 aaPredicted RBP9.89□□□□□ -0.83
SF3A1-207ENST00000471342 HDDC3Q8N4P3 179 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 FAM160A2Q8N612 972 aaPredicted RBP9.89□□□□□ -0.83
SF3A1-207ENST00000471342 ACVR1CQ8NER5 493 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 C1orf216Q8TAB5 229 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 RLN3Q8WXF3 142 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.89□□□□□ -0.83
SF3A1-207ENST00000471342 LRRC39Q96DD0 335 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 SIPA1Q96FS4 1042 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 CDKN2AIPNLQ96HQ2 116 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 TBATAQ96M53 351 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 PPP1R2P1Q96PQ5 205 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 FRMD8Q9BZ67 464 aaPredicted RBP9.89□□□□□ -0.83
SF3A1-207ENST00000471342 IL22Q9GZX6 179 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 UGT1A7Q9HAW7 530 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 UGT1A10Q9HAW8 530 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 UGT1A8Q9HAW9 530 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 SAYSD1Q9NPB0 183 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 NLE1Q9NVX2 485 aaPredicted RBP9.89□□□□□ -0.83
SF3A1-207ENST00000471342 RABGEF1Q9UJ41 708 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 PNMA8BQ9ULN7 279 aaPredicted RBP9.89□□□□□ -0.83
SF3A1-207ENST00000471342 CHMP2BQ9UQN3 213 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 MED16Q9Y2X0 877 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 PCYT1BQ9Y5K3 369 aaPredicted RBP9.89□□□□□ -0.83
SF3A1-207ENST00000471342 PSAT1Q9Y617 370 aa9.89□□□□□ -0.83
SF3A1-207ENST00000471342 CCDC78A2IDD5 438 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 CCDC162PA2VCL2 907 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 FADS2P1A8MWK0 482 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 H0Y858 1186 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 K7ESM1 405 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 AGPSO00116 658 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 SLC7A4O43246 635 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 RIPK2O43353 540 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 MMP20O60882 483 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 SASH3O75995 380 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 USP1O94782 785 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 ADH1BP00325 375 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 FUCA1P04066 466 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 BCKDHBP21953 392 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 HSD17B3P37058 310 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 SPINT3P49223 89 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 LIG3P49916 1009 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 SUOXP51687 545 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 ARL4CP56559 192 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 B4GALNT1Q00973 533 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 CALCOCO2Q13137 446 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 CRYMQ14894 314 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 WSCD2Q2TBF2 565 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 ZNF658BQ4V348 819 aaPredicted RBP9.88□□□□□ -0.83
SF3A1-207ENST00000471342 KHDC1Q4VXA5 237 aaKnown RBP9.88□□□□□ -0.83
SF3A1-207ENST00000471342 SETMARQ53H47 684 aaPredicted RBP9.88□□□□□ -0.83
SF3A1-207ENST00000471342 ZNF789Q5FWF6 425 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 TNFAIP8L3Q5GJ75 292 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 TPRG1LQ5T0D9 272 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 HENMT1Q5T8I9 393 aaKnown RBP9.88□□□□□ -0.83
SF3A1-207ENST00000471342 TEDDM1Q5T9Z0 273 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 ARMC3Q5W041 872 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 ANO7Q6IWH7 933 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.88□□□□□ -0.83
SF3A1-207ENST00000471342 CENPUQ71F23 418 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 CYP2U1Q7Z449 544 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 NLRP8Q86W28 1048 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 CNTN4Q8IWV2 1026 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 TP53I13Q8NBR0 393 aaPredicted RBP9.88□□□□□ -0.83
SF3A1-207ENST00000471342 PLA2G15Q8NCC3 412 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 DTX3LQ8TDB6 740 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 MZB1Q8WU39 189 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 PDCD6IPQ8WUM4 868 aaKnown RBP9.88□□□□□ -0.83
SF3A1-207ENST00000471342 PTCD2Q8WV60 388 aaKnown RBP9.88□□□□□ -0.83
SF3A1-207ENST00000471342 PEX13Q92968 403 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 SCAMP4Q969E2 229 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 CENPTQ96BT3 561 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 FERMT1Q9BQL6 677 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 IER2Q9BTL4 223 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 ABCG8Q9H221 673 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 BPIFA1Q9NP55 256 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 MBNL1Q9NR56 388 aaKnown RBP9.88□□□□□ -0.83
SF3A1-207ENST00000471342 GPR27Q9NS67 375 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 FBXL12Q9NXK8 326 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.88□□□□□ -0.83
SF3A1-207ENST00000471342 FZD4Q9ULV1 537 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 COQ6Q9Y2Z9 468 aa9.88□□□□□ -0.83
SF3A1-207ENST00000471342 SCN8AQ9UQD0 1980 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms