RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 CTAGE15A4D2H0 777 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 MROH6A6NGR9 719 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 KCNU1A8MYU2 1149 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 FAM72CH0Y354 149 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 H3BQ06 376 aaPredicted RBP4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 LEFTY2O00292 366 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 EEF2KO00418 725 aaKnown RBP4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 NOBOXO60393 691 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 ACSL4O60488 711 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 CST8O60676 142 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 MOSPD3O75425 235 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 KATNA1O75449 491 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 FGF19O95750 216 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 GLP2RO95838 553 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 CTAGE8P0CG41 777 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 SLC2A3P11169 496 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 PRLRP16471 622 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 GOT1P17174 413 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 ENPP1P22413 925 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 CORO1AP31146 461 aaKnown RBP4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 CSF2RBP32927 897 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 AVPR1AP37288 418 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 VIPR2P41587 438 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 SLC11A2P49281 568 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 NUMBP49757 651 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 TUBP50607 506 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 TERF1P54274 439 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 VCPP55072 806 aaKnown RBP4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 TPI1P60174 286 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 CKAP4Q07065 602 aaKnown RBP4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 C2orf54Q08AI8 447 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 TUBB2AQ13885 445 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 DPYSL3Q14195 570 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 USP10Q14694 798 aaKnown RBP4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 PDK2Q15119 407 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 WHAMMP3Q1A5X7 153 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 SLC5A9Q2M3M2 681 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 ANKRD20A8PQ5CZ79 823 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 BRMS1LQ5PSV4 323 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 FAM182AQ5T1J6 154 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 FAM72AQ5TYM5 149 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 LRRC38Q5VT99 294 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 DCAF12L1Q5VU92 463 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 SNX30Q5VWJ9 437 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 TRIM68Q6AZZ1 485 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 FAM72DQ6L9T8 149 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 MSANTD2Q6P1R3 559 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 RFWD3Q6PCD5 774 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 SYCE2Q6PIF2 218 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 NPNTQ6UXI9 565 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 UNQ6494/PRO21346Q6UXR6 183 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 LRRC31Q6UY01 552 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 TPGS1Q6ZTW0 290 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 RTL10Q7L3V2 364 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 BEND5Q7L4P6 421 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 GPR149Q86SP6 731 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 CTAGE6Q86UF2 777 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 FAM124AQ86V42 546 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 CHSY1Q86X52 802 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 FAM72BQ86X60 149 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 ZNF354CQ86Y25 554 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 SLC13A5Q86YT5 568 aaPredicted RBP4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 UNC45BQ8IWX7 931 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 CTAGE4Q8IX94 777 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 KLHL7Q8IXQ5 586 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 KATNAL2Q8IYT4 538 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 LGI2Q8N0V4 545 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 BCL6BQ8N143 479 aaPredicted RBP4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 CFAP52Q8N1V2 620 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 CEP112Q8N8E3 955 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 CMASQ8NFW8 434 aaPredicted RBP4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 EXD1Q8NHP7 514 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 TEKT4Q8WW24 435 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 C1orf54Q8WWF1 131 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 RSAD2Q8WXG1 361 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 NT5C3BQ969T7 300 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 MBD6Q96DN6 1003 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 PGAP3Q96FM1 320 aaPredicted RBP4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 SLC39A13Q96H72 371 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 CDX2Q99626 313 aaPredicted RBP4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 HERPUD2Q9BSE4 406 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 TUBB2BQ9BVA1 445 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 OSBPL8Q9BZF1 889 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 TRIM8Q9BZR9 551 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 ADAM7Q9H2U9 754 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 SMOC2Q9H3U7 446 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 TASP1Q9H6P5 420 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 C10orf88Q9H8K7 445 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 WDR6Q9NNW5 1121 aaKnown RBP4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 POLR3BQ9NW08 1133 aaPredicted RBP4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 ARHGEF38Q9NXL2 777 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 MPP6Q9NZW5 540 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 CWC15Q9P013 229 aaKnown RBP4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 CFAP97Q9P2B7 532 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 SAE1Q9UBE0 346 aaPredicted RBP4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 OR12D3Q9UGF7 316 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 LSM7Q9UK45 103 aaKnown RBP4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 VANGL2Q9ULK5 521 aa4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 HBS1LQ9Y450 684 aaKnown RBP4.18□□□□□ -1.74
TMEM39A-204ENST00000468545 HEY1Q9Y5J3 304 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms