RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 GPR37L1O60883 481 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 ZNF217O75362 1048 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 CLDN7O95471 211 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 FAM153BP0C7A2 387 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 ZNF30P17039 623 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 ADRA1DP25100 572 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 NFKBIAP25963 317 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 AVPR2P30518 371 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 HMGCLP35914 325 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 LIG3P49916 1009 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 ACVR1Q04771 509 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 CCDC15Q0P6D6 951 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 FAM153CQ494X1 144 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 DNAJC21Q5F1R6 531 aaKnown RBP11.15□□□□□ -0.62
VCP-204ENST00000466100 PCID2Q5JVF3 399 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 STEAP4Q687X5 459 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 DENND2CQ68D51 928 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 CENPUQ71F23 418 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 WDR5BQ86VZ2 330 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 RELL1Q8IUW5 271 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 PGBD3Q8N328 593 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 FRMD1Q8N878 549 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 OR13J1Q8NGT2 312 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 GANCQ8TET4 914 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.15□□□□□ -0.62
VCP-204ENST00000466100 COQ10AQ96MF6 247 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 EBNA1BP2Q99848 306 aaKnown RBP11.15□□□□□ -0.62
VCP-204ENST00000466100 C19orf43Q9BQ61 176 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 WRAP53Q9BUR4 548 aaKnown RBP11.15□□□□□ -0.62
VCP-204ENST00000466100 KDM4CQ9H3R0 1056 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 ZFYVE1Q9HBF4 777 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 SGK2Q9HBY8 427 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 TREX1Q9NSU2 369 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 WSB2Q9NYS7 404 aaPredicted RBP11.15□□□□□ -0.62
VCP-204ENST00000466100 IL17CQ9P0M4 197 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 NFKBIL1Q9UBC1 381 aaPredicted RBP11.15□□□□□ -0.62
VCP-204ENST00000466100 MTRF1LQ9UGC7 380 aaKnown RBP11.15□□□□□ -0.62
VCP-204ENST00000466100 MBD1Q9UIS9 605 aaPredicted RBP11.15□□□□□ -0.62
VCP-204ENST00000466100 FBXO4Q9UKT5 387 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 RIMKLBQ9ULI2 386 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 CYP8B1Q9UNU6 501 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 ZFR2Q9UPR6 939 aaKnown RBP11.15□□□□□ -0.62
VCP-204ENST00000466100 NCKAP1Q9Y2A7 1128 aa11.15□□□□□ -0.62
VCP-204ENST00000466100 PIKFYVEQ9Y2I7 2098 aa11.15□□□□□ -0.63
VCP-204ENST00000466100 FAM237BA0A1B0GVD1 139 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 A8MX80 341 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 PRR33A8MZF0 331 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 PSMD11O00231 422 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 GAPDHSO14556 408 aaPredicted RBP11.14□□□□□ -0.63
VCP-204ENST00000466100 CRTAMO95727 393 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 ELFN1P0C7U0 828 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 C6P13671 934 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 LPOP22079 712 aaPredicted RBP11.14□□□□□ -0.63
VCP-204ENST00000466100 CD6P30203 668 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 OXTRP30559 389 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 ELK3P41970 407 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 PPP2CBP62714 309 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 PPP2CAP67775 309 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 PDIA2Q13087 525 aaKnown RBP11.14□□□□□ -0.63
VCP-204ENST00000466100 SEPT6Q14141 434 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 FGL2Q14314 439 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 PTPRCAPQ14761 206 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 AGERQ15109 404 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 TSTD2Q5T7W7 516 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 SEL1L3Q68CR1 1132 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 NEK5Q6P3R8 708 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 RFLNAQ6ZTI6 216 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 HSD11B1LQ7Z5J1 315 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 TECPR1Q7Z6L1 1165 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 TMEM135Q86UB9 458 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 FAM124AQ86V42 546 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 TRIM69Q86WT6 500 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 RAVER1Q8IY67 606 aaKnown RBP11.14□□□□□ -0.63
VCP-204ENST00000466100 FAM160A2Q8N612 972 aaPredicted RBP11.14□□□□□ -0.63
VCP-204ENST00000466100 PPHLN1Q8NEY8 458 aaKnown RBP11.14□□□□□ -0.63
VCP-204ENST00000466100 OR13C4Q8NGS5 318 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 OR2T34Q8NGX1 318 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 OR14C36Q8NHC7 312 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 AENQ8WTP8 325 aaKnown RBP11.14□□□□□ -0.63
VCP-204ENST00000466100 RLN3Q8WXF3 142 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 PEX13Q92968 403 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 STAMBPL1Q96FJ0 436 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 TOE1Q96GM8 510 aaKnown RBP11.14□□□□□ -0.63
VCP-204ENST00000466100 DNAJC1Q96KC8 554 aaKnown RBP11.14□□□□□ -0.63
VCP-204ENST00000466100 GPR63Q9BZJ6 419 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 BTBD1Q9H0C5 482 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 SAYSD1Q9NPB0 183 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 CHRAC1Q9NRG0 131 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 SLC2A6Q9UGQ3 507 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 CHMP2BQ9UQN3 213 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 CACNA1EQ15878 2313 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 DNAH14Q0VDD8 3507 aa11.14□□□□□ -0.63
VCP-204ENST00000466100 SDK1Q7Z5N4 2213 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 ZCWPW2A0A1B0GU75 182 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 A0A1W2PQU0 124 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 H7C0S8 307 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 LATO43561 262 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 BUD23O43709 281 aaKnown RBP11.13□□□□□ -0.63
VCP-204ENST00000466100 MMP20O60882 483 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 RNGTTO60942 597 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms