RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 FAM90A5PA8MXJ8 464 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 SLC30A4O14863 429 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 ITM2AO43736 263 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 SERPINI2O75830 405 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 CGAP01215 116 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 FAM90A15PP0C7V4 464 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 FAM90A14PP0C7W9 464 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 FCGR2AP12318 317 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 ENO3P13929 434 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 PCP4P48539 62 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 CDK18Q07002 472 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 SIGLEC14Q08ET2 396 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 MRGPRG-AS1Q2M3A8 158 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 ZACNQ401N2 412 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 EFHC1Q5JVL4 640 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 MTFR2Q6P444 385 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 RNF144BQ7Z419 303 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 C11orf96Q7Z7L8 435 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 ZDHHC23Q8IYP9 409 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 ANKRD13AQ8IZ07 590 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 LILRB1Q8NHL6 650 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 HDAC7Q8WUI4 952 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 FAR1Q8WVX9 515 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 RSC1A1Q92681 617 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 KIAA1191Q96A73 305 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 FRG2BQ96QU4 278 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 SLC25A33Q9BSK2 321 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 IFT27Q9BW83 186 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 TRIM31Q9BZY9 425 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 STK26Q9P289 416 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 KLHL42Q9P2K6 505 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 SEL1LQ9UBV2 794 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 SRP68Q9UHB9 627 aaKnown RBP3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 AGO1Q9UL18 857 aaKnown RBP3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 GBF1Q92538 1859 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 HIVEP1P15822 2718 aa3.05□□□□□ -1.92
HMGB1P18-201ENST00000438801 CACNA1EQ15878 2313 aa3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 COL6A6A6NMZ7 2263 aa3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 RIC1Q4ADV7 1423 aa3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 BIRC6Q9NR09 4857 aa3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 CARMIL3Q8ND23 1372 aa3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 C17orf102A2RUQ5 167 aa3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 TMEM247A6NEH6 219 aa3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 EYA2O00167 538 aa3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 GRM8O00222 908 aa3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 BMPR1BO00238 502 aa3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 RNMTO43148 476 aaKnown RBP3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 HEXIM1O94992 359 aaKnown RBP3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 SIX3O95343 332 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 CLDN7O95471 211 aa3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 PDGFBP01127 241 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 SP1P08047 785 aa3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 C21orf33P30042 268 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 CSRP3P50461 194 aa3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 CLCNKBP51801 687 aa3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 ALKBH1Q13686 389 aaKnown RBP3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 TBRG1Q3YBR2 411 aa3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 SYTL3Q4VX76 610 aa3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 DSTYKQ6XUX3 929 aa3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 MEX3BQ6ZN04 569 aaKnown RBP3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 SERPINA11Q86U17 422 aa3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 VPS52Q8N1B4 723 aa3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 TMEM105Q8N8V8 129 aa3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 TEX45Q8NA69 505 aa3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 PARD3BQ8TEW8 1205 aa3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 ADGRG7Q96K78 797 aa3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 CCDC138Q96M89 665 aa3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 SPRY4Q9C004 299 aa3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 DONSONQ9NYP3 566 aa3.04□□□□□ -1.92
HMGB1P18-201ENST00000438801 RYR1P21817 5038 aa3.03□□□□□ -1.92
HMGB1P18-201ENST00000438801 KIAA1217Q5T5P2 1943 aa3.03□□□□□ -1.92
HMGB1P18-201ENST00000438801 NBASA2RRP1 2371 aa3.03□□□□□ -1.92
HMGB1P18-201ENST00000438801 A0A0A0MQY5 61 aa3.03□□□□□ -1.92
HMGB1P18-201ENST00000438801 ANO9A1A5B4 782 aa3.03□□□□□ -1.92
HMGB1P18-201ENST00000438801 MMP3P08254 477 aa3.03□□□□□ -1.92
HMGB1P18-201ENST00000438801 ABCB4P21439 1286 aa3.03□□□□□ -1.92
HMGB1P18-201ENST00000438801 RFC1P35251 1148 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P18-201ENST00000438801 AK2P54819 239 aa3.03□□□□□ -1.92
HMGB1P18-201ENST00000438801 ILF3Q12906 894 aaKnown RBP eCLIP3.03□□□□□ -1.92
HMGB1P18-201ENST00000438801 MYBPC2Q14324 1141 aa3.03□□□□□ -1.92
HMGB1P18-201ENST00000438801 SF3B4Q15427 424 aaKnown RBP eCLIP3.03□□□□□ -1.92
HMGB1P18-201ENST00000438801 RETSATQ6NUM9 610 aa3.03□□□□□ -1.92
HMGB1P18-201ENST00000438801 WDR5BQ86VZ2 330 aa3.03□□□□□ -1.92
HMGB1P18-201ENST00000438801 SYTL1Q8IYJ3 562 aa3.03□□□□□ -1.92
HMGB1P18-201ENST00000438801 KCNJ9Q92806 393 aa3.03□□□□□ -1.92
HMGB1P18-201ENST00000438801 GAREM1Q9H706 876 aa3.03□□□□□ -1.92
HMGB1P18-201ENST00000438801 SDF2L1Q9HCN8 221 aa3.03□□□□□ -1.92
HMGB1P18-201ENST00000438801 SLC22A11Q9NSA0 550 aa3.03□□□□□ -1.92
HMGB1P18-201ENST00000438801 AHCTF1Q8WYP5 2266 aa3.03□□□□□ -1.92
HMGB1P18-201ENST00000438801 ANKRD31Q8N7Z5 1873 aa3.03□□□□□ -1.93
HMGB1P18-201ENST00000438801 PIK3C2GO75747 1445 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 ANKARQ7Z5J8 1434 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 NRXN2Q9P2S2 1712 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 ZNF831Q5JPB2 1677 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 ACACAQ13085 2346 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 CDHR2Q9BYE9 1310 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 DDTLA6NHG4 134 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 NPIPB13A6NJU9 1138 aa3.02□□□□□ -1.93
HMGB1P18-201ENST00000438801 AQP12BA6NM10 295 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms