RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 WFS1O76024 890 aa25.72■■□□□ 1.71
CPNE1-216ENST00000437340 LPOP22079 712 aaPredicted RBP25.72■■□□□ 1.71
CPNE1-216ENST00000437340 PMLP29590 882 aa25.72■■□□□ 1.71
CPNE1-216ENST00000437340 RPL14P50914 215 aaKnown RBP25.72■■□□□ 1.71
CPNE1-216ENST00000437340 TRAF2Q12933 501 aa25.72■■□□□ 1.71
CPNE1-216ENST00000437340 USP4Q13107 963 aa25.72■■□□□ 1.71
CPNE1-216ENST00000437340 ARL13AQ5H913 290 aaPredicted RBP25.72■■□□□ 1.71
CPNE1-216ENST00000437340 RETSATQ6NUM9 610 aa25.72■■□□□ 1.71
CPNE1-216ENST00000437340 OR4K2Q8NGD2 314 aa25.72■■□□□ 1.71
CPNE1-216ENST00000437340 ACDQ96AP0 544 aa25.72■■□□□ 1.71
CPNE1-216ENST00000437340 MIPEPQ99797 713 aa25.72■■□□□ 1.71
CPNE1-216ENST00000437340 NCKIPSDQ9NZQ3 722 aa25.72■■□□□ 1.71
CPNE1-216ENST00000437340 SCAMP3O14828 347 aaKnown RBP25.72■■□□□ 1.71
CPNE1-216ENST00000437340 GYG2O15488 501 aa25.72■■□□□ 1.71
CPNE1-216ENST00000437340 AP1S1P61966 158 aa25.72■■□□□ 1.71
CPNE1-216ENST00000437340 SEMA3AQ14563 771 aa25.72■■□□□ 1.71
CPNE1-216ENST00000437340 METTL21CQ5VZV1 264 aa25.72■■□□□ 1.71
CPNE1-216ENST00000437340 WFDC5Q8TCV5 224 aa25.72■■□□□ 1.71
CPNE1-216ENST00000437340 DDI1Q8WTU0 396 aa25.72■■□□□ 1.71
CPNE1-216ENST00000437340 C17orf80Q9BSJ5 609 aa25.72■■□□□ 1.71
CPNE1-216ENST00000437340 ASAH2Q9NR71 780 aa25.72■■□□□ 1.71
CPNE1-216ENST00000437340 SDAD1Q9NVU7 687 aaKnown RBP eCLIP25.72■■□□□ 1.718e-7■□□□□ 11.1
CPNE1-216ENST00000437340 CRYL1Q9Y2S2 319 aa25.72■■□□□ 1.71
CPNE1-216ENST00000437340 MATN2O00339 956 aa25.71■■□□□ 1.71
CPNE1-216ENST00000437340 CHUKO15111 745 aa25.71■■□□□ 1.71
CPNE1-216ENST00000437340 PIGNO95427 931 aa25.71■■□□□ 1.71
CPNE1-216ENST00000437340 ZNF549Q6P9A3 640 aa25.71■■□□□ 1.71
CPNE1-216ENST00000437340 METTL3Q86U44 580 aaKnown RBP25.71■■□□□ 1.71
CPNE1-216ENST00000437340 CADM1Q9BY67 442 aaKnown RBP25.71■■□□□ 1.71
CPNE1-216ENST00000437340 TAS2R1Q9NYW7 299 aa25.71■■□□□ 1.71
CPNE1-216ENST00000437340 VTI1BQ9UEU0 232 aa25.71■■□□□ 1.71
CPNE1-216ENST00000437340 VPS9D1Q9Y2B5 631 aa25.71■■□□□ 1.71
CPNE1-216ENST00000437340 CXorf51AA0A1B0GTR3 108 aa25.7■■□□□ 1.7
CPNE1-216ENST00000437340 HDAC3O15379 428 aa25.7■■□□□ 1.7
CPNE1-216ENST00000437340 GSC2O15499 205 aa25.7■■□□□ 1.7
CPNE1-216ENST00000437340 FZD6O60353 706 aa25.7■■□□□ 1.7
CPNE1-216ENST00000437340 DIAPH2O60879 1101 aa25.7■■□□□ 1.7
CPNE1-216ENST00000437340 GLUD1P00367 558 aa25.7■■□□□ 1.7
CPNE1-216ENST00000437340 ENO1P06733 434 aaKnown RBP25.7■■□□□ 1.7
CPNE1-216ENST00000437340 CHRNGP07510 517 aa25.7■■□□□ 1.7
CPNE1-216ENST00000437340 SLC8A1P32418 973 aa25.7■■□□□ 1.7
CPNE1-216ENST00000437340 RTL10Q7L3V2 364 aa25.7■■□□□ 1.7
CPNE1-216ENST00000437340 SLC22A9Q8IVM8 553 aa25.7■■□□□ 1.7
CPNE1-216ENST00000437340 PNPLA1Q8N8W4 532 aa25.7■■□□□ 1.7
CPNE1-216ENST00000437340 TXNDC5Q8NBS9 432 aaKnown RBP25.7■■□□□ 1.7
CPNE1-216ENST00000437340 FAM13CQ8NE31 585 aa25.7■■□□□ 1.7
CPNE1-216ENST00000437340 ANKRD49Q8WVL7 239 aa25.7■■□□□ 1.7
CPNE1-216ENST00000437340 CNDP1Q96KN2 507 aa25.7■■□□□ 1.7
CPNE1-216ENST00000437340 TCF25Q9BQ70 676 aa25.7■■□□□ 1.7
CPNE1-216ENST00000437340 AARSD1Q9BTE6 412 aaKnown RBP25.7■■□□□ 1.7
CPNE1-216ENST00000437340 MMADHCQ9H3L0 296 aaPredicted RBP25.7■■□□□ 1.7
CPNE1-216ENST00000437340 DENND4CQ5VZ89 1909 aa25.7■■□□□ 1.7
CPNE1-216ENST00000437340 A0A1W2PRU2 124 aa25.69■■□□□ 1.7
CPNE1-216ENST00000437340 PRR5-ARHGAP8B1AHC4 643 aa25.69■■□□□ 1.7
CPNE1-216ENST00000437340 SPECC1L-ADORA2AF8WAN1 911 aa25.69■■□□□ 1.7
CPNE1-216ENST00000437340 MPSTP25325 297 aa25.69■■□□□ 1.7
CPNE1-216ENST00000437340 ARHGAP8P85298 464 aa25.69■■□□□ 1.7
CPNE1-216ENST00000437340 TMEM207Q6UWW9 146 aa25.69■■□□□ 1.7
CPNE1-216ENST00000437340 RINLQ6ZS11 566 aa25.69■■□□□ 1.7
CPNE1-216ENST00000437340 TMPRSS6Q8IU80 811 aa25.69■■□□□ 1.7
CPNE1-216ENST00000437340 BBS7Q8IWZ6 715 aa25.69■■□□□ 1.7
CPNE1-216ENST00000437340 LSMEM2Q8N112 164 aa25.69■■□□□ 1.7
CPNE1-216ENST00000437340 TEX9Q8N6V9 391 aa25.69■■□□□ 1.7
CPNE1-216ENST00000437340 KIAA1522Q9P206 1035 aaPredicted RBP25.69■■□□□ 1.7
CPNE1-216ENST00000437340 FCF1Q9Y324 198 aaKnown RBP25.69■■□□□ 1.7
CPNE1-216ENST00000437340 A8MUI8 341 aa25.69■■□□□ 1.7
CPNE1-216ENST00000437340 IPO13O94829 963 aaKnown RBP25.69■■□□□ 1.7
CPNE1-216ENST00000437340 PENKP01210 267 aaPredicted RBP25.69■■□□□ 1.7
CPNE1-216ENST00000437340 TFEBP19484 476 aa25.69■■□□□ 1.7
CPNE1-216ENST00000437340 CSNK1DP48730 415 aa25.69■■□□□ 1.7
CPNE1-216ENST00000437340 UBAP2LQ14157 1087 aaKnown RBP25.69■■□□□ 1.7
CPNE1-216ENST00000437340 SEL1L3Q68CR1 1132 aa25.69■■□□□ 1.7
CPNE1-216ENST00000437340 TRIM67Q6ZTA4 783 aa25.69■■□□□ 1.7
CPNE1-216ENST00000437340 FIBINQ8TAL6 211 aa25.69■■□□□ 1.7
CPNE1-216ENST00000437340 UNKQ9C0B0 810 aaKnown RBP25.69■■□□□ 1.7
CPNE1-216ENST00000437340 POMKQ9H5K3 350 aa25.69■■□□□ 1.7
CPNE1-216ENST00000437340 ARHGAP26Q9UNA1 814 aa25.69■■□□□ 1.7
CPNE1-216ENST00000437340 H7C0S8 307 aa25.68■■□□□ 1.7
CPNE1-216ENST00000437340 LEFTY2O00292 366 aa25.68■■□□□ 1.7
CPNE1-216ENST00000437340 PFDN6O15212 129 aa25.68■■□□□ 1.7
CPNE1-216ENST00000437340 CSPG5O95196 566 aa25.68■■□□□ 1.7
CPNE1-216ENST00000437340 FGF19O95750 216 aa25.68■■□□□ 1.7
CPNE1-216ENST00000437340 MAPK8P45983 427 aa25.68■■□□□ 1.7
CPNE1-216ENST00000437340 ERVFC1P60507 584 aa25.68■■□□□ 1.7
CPNE1-216ENST00000437340 WASHC2DQ5SRD0 308 aa25.68■■□□□ 1.7
CPNE1-216ENST00000437340 VWA5B1Q5TIE3 1220 aa25.68■■□□□ 1.7
CPNE1-216ENST00000437340 ARHGAP24Q8N264 748 aa25.68■■□□□ 1.7
CPNE1-216ENST00000437340 TTC30BQ8N4P2 665 aa25.68■■□□□ 1.7
CPNE1-216ENST00000437340 LPGAT1Q92604 370 aa25.68■■□□□ 1.7
CPNE1-216ENST00000437340 CORO1BQ9BR76 489 aa25.68■■□□□ 1.7
CPNE1-216ENST00000437340 SLC46A2Q9BY10 475 aa25.68■■□□□ 1.7
CPNE1-216ENST00000437340 C1orf21Q9H246 121 aa25.68■■□□□ 1.7
CPNE1-216ENST00000437340 RWDD3Q9Y3V2 267 aa25.68■■□□□ 1.7
CPNE1-216ENST00000437340 B2RBV5 119 aa25.67■■□□□ 1.7
CPNE1-216ENST00000437340 F8W8V4 182 aa25.67■■□□□ 1.7
CPNE1-216ENST00000437340 CA3P07451 260 aa25.67■■□□□ 1.7
CPNE1-216ENST00000437340 MNAT1P51948 309 aa25.67■■□□□ 1.7
CPNE1-216ENST00000437340 TIAL1Q01085 375 aaKnown RBP eCLIP25.67■■□□□ 1.72e-6■■■■■ 33.5
CPNE1-216ENST00000437340 GPR158Q5T848 1215 aa25.67■■□□□ 1.7
CPNE1-216ENST00000437340 APCDD1Q8J025 514 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms