RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 CCR5P51681 352 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 STC1P52823 247 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 PLTPP55058 493 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 PPP2CBP62714 309 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 PPP2CAP67775 309 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 ACOX1Q15067 660 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 ELF2Q15723 593 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 TMEM259Q4ZIN3 620 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 PCID2Q5JVF3 399 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 SPDYCQ5MJ68 293 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 DENND2CQ68D51 928 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 CASC4Q6P4E1 433 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 CRTC1Q6UUV9 634 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 LIPIQ6XZB0 460 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 CENPUQ71F23 418 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 CEP68Q76N32 757 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 LPCAT2Q7L5N7 544 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 TSPAN33Q86UF1 283 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 FAM160A2Q8N612 972 aaPredicted RBP11.01□□□□□ -0.65
CHD4-202ENST00000430771 DENND6BQ8NEG7 585 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 CADM4Q8NFZ8 388 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 SNX19Q92543 992 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 PEX13Q92968 403 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 ART4Q93070 314 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 LRRC39Q96DD0 335 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 NUS1Q96E22 293 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 FMO2Q99518 471 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 C19orf43Q9BQ61 176 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 TSPYL1Q9H0U9 437 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 CDH19Q9H159 772 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 GDF3Q9NR23 364 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 SYBUQ9NX95 663 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 NFKBIL1Q9UBC1 381 aaPredicted RBP11.01□□□□□ -0.65
CHD4-202ENST00000430771 TCAF1Q9Y4C2 921 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 SPO11Q9Y5K1 396 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 CEP192Q8TEP8 1941 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 FANCMQ8IYD8 2048 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 TRPM6Q9BX84 2022 aa11.01□□□□□ -0.65
CHD4-202ENST00000430771 NUMA1Q14980 2115 aa11□□□□□ -0.65
CHD4-202ENST00000430771 SDR42E2A6NKP2 422 aa11□□□□□ -0.65
CHD4-202ENST00000430771 A8MX80 341 aa11□□□□□ -0.65
CHD4-202ENST00000430771 WNT9AO14904 365 aa11□□□□□ -0.65
CHD4-202ENST00000430771 MMP20O60882 483 aa11□□□□□ -0.65
CHD4-202ENST00000430771 FSBPO95073 299 aa11□□□□□ -0.65
CHD4-202ENST00000430771 CLDN7O95471 211 aa11□□□□□ -0.65
CHD4-202ENST00000430771 PYGLP06737 847 aa11□□□□□ -0.65
CHD4-202ENST00000430771 TPH1P17752 444 aa11□□□□□ -0.65
CHD4-202ENST00000430771 BCKDHBP21953 392 aa11□□□□□ -0.65
CHD4-202ENST00000430771 LPOP22079 712 aaPredicted RBP11□□□□□ -0.65
CHD4-202ENST00000430771 ADRA1DP25100 572 aa11□□□□□ -0.65
CHD4-202ENST00000430771 TNFRSF8P28908 595 aa11□□□□□ -0.65
CHD4-202ENST00000430771 SPAM1P38567 509 aa11□□□□□ -0.65
CHD4-202ENST00000430771 HADHAP40939 763 aa11□□□□□ -0.65
CHD4-202ENST00000430771 ZNF140P52738 457 aaPredicted RBP11□□□□□ -0.65
CHD4-202ENST00000430771 DCDC1P59894 354 aa11□□□□□ -0.65
CHD4-202ENST00000430771 SEMG2Q02383 582 aa11□□□□□ -0.65
CHD4-202ENST00000430771 SGCGQ13326 291 aa11□□□□□ -0.65
CHD4-202ENST00000430771 CDKN3Q16667 212 aa11□□□□□ -0.65
CHD4-202ENST00000430771 ZNF284Q2VY69 593 aa11□□□□□ -0.65
CHD4-202ENST00000430771 BBS9Q3SYG4 887 aa11□□□□□ -0.65
CHD4-202ENST00000430771 SEL1L3Q68CR1 1132 aa11□□□□□ -0.65
CHD4-202ENST00000430771 PMS2CLQ68D20 193 aa11□□□□□ -0.65
CHD4-202ENST00000430771 ZDHHC24Q6UX98 284 aa11□□□□□ -0.65
CHD4-202ENST00000430771 ZNF765Q7L2R6 523 aa11□□□□□ -0.65
CHD4-202ENST00000430771 CYP2U1Q7Z449 544 aa11□□□□□ -0.65
CHD4-202ENST00000430771 CAND1Q86VP6 1230 aaKnown RBP11□□□□□ -0.65
CHD4-202ENST00000430771 CCNJLQ8IV13 435 aa11□□□□□ -0.65
CHD4-202ENST00000430771 NRSN1Q8IZ57 195 aa11□□□□□ -0.65
CHD4-202ENST00000430771 TTC30BQ8N4P2 665 aa11□□□□□ -0.65
CHD4-202ENST00000430771 ZBTB44Q8NCP5 570 aa11□□□□□ -0.65
CHD4-202ENST00000430771 FBXO25Q8TCJ0 367 aa11□□□□□ -0.65
CHD4-202ENST00000430771 STYXQ8WUJ0 223 aa11□□□□□ -0.65
CHD4-202ENST00000430771 ASB12Q8WXK4 309 aa11□□□□□ -0.65
CHD4-202ENST00000430771 STAMBPL1Q96FJ0 436 aa11□□□□□ -0.65
CHD4-202ENST00000430771 DTD2Q96FN9 168 aa11□□□□□ -0.65
CHD4-202ENST00000430771 SMIM14Q96QK8 99 aa11□□□□□ -0.65
CHD4-202ENST00000430771 NAT9Q9BTE0 207 aa11□□□□□ -0.65
CHD4-202ENST00000430771 IRF2BPLQ9H1B7 796 aa11□□□□□ -0.65
CHD4-202ENST00000430771 C6orf106Q9H6K1 298 aaPredicted RBP11□□□□□ -0.65
CHD4-202ENST00000430771 MBD1Q9UIS9 605 aaPredicted RBP11□□□□□ -0.65
CHD4-202ENST00000430771 RIMKLBQ9ULI2 386 aa11□□□□□ -0.65
CHD4-202ENST00000430771 SOX13Q9UN79 622 aa11□□□□□ -0.65
CHD4-202ENST00000430771 DMTF1Q9Y222 760 aa11□□□□□ -0.65
CHD4-202ENST00000430771 ARL5AQ9Y689 179 aa11□□□□□ -0.65
CHD4-202ENST00000430771 MAGEB16A2A368 324 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 IGLON5A6NGN9 336 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 E7ESA3 106 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 TP73O15350 636 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 LATO43561 262 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 LDB2O43679 373 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 LILRB5O75023 590 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 RECQL5O94762 991 aaPredicted RBP10.99□□□□□ -0.65
CHD4-202ENST00000430771 RHOBTB1O94844 696 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 TTC4O95801 387 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 PGAM1P18669 254 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 PAMP19021 973 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 HNRNPA2B1P22626 353 aaKnown RBP10.99□□□□□ -0.65
CHD4-202ENST00000430771 MAT2AP31153 395 aaKnown RBP10.99□□□□□ -0.65
CHD4-202ENST00000430771 AKT2P31751 481 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 ETV3P41162 512 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms