RNA–Protein interactions for RNA: ENST00000428482.5

HDLBP-216, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-216ENST00000428482 RBM22Q9NW64 420 aaKnown RBP eCLIP10.26□□□□□ -0.771e-15■■■□□ 17.7
HDLBP-216ENST00000428482 RNF14Q9UBS8 474 aa10.26□□□□□ -0.77
HDLBP-216ENST00000428482 CHKBQ9Y259 395 aa10.26□□□□□ -0.77
HDLBP-216ENST00000428482 CACNA1BQ00975 2339 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 MACROD2A1Z1Q3 448 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 PMS2P1A4D2B8 440 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 CTAGE9A4FU28 777 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 TMEM202A6NGA9 273 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 MATN3O15232 486 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 LZTS3O60299 673 aaPredicted RBP10.25□□□□□ -0.77
HDLBP-216ENST00000428482 RFPL3O75679 317 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 FTCDO95954 541 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 PRLP01236 227 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 JUNDP17535 347 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 CD68P34810 354 aaPredicted RBP10.25□□□□□ -0.77
HDLBP-216ENST00000428482 NUDT1P36639 197 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 ARRB1P49407 418 aaPredicted RBP10.25□□□□□ -0.77
HDLBP-216ENST00000428482 TUBB4BP68371 445 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 SKOR1P84550 965 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 ITKQ08881 620 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 AP1B1Q10567 949 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 SGCGQ13326 291 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 NFATC4Q14934 902 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 PRKD1Q15139 912 aaPredicted RBP10.25□□□□□ -0.77
HDLBP-216ENST00000428482 ST3GAL2Q16842 350 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 MARC1Q5VT66 337 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 GUSBP11Q6P575 273 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 SLC35F6Q8N357 371 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 OXR1Q8N573 874 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 KYQ8NBH2 561 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 SPATA22Q8NHS9 363 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 CCL4L1Q8NHW4 92 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 MDM1Q8TC05 714 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.25□□□□□ -0.77
HDLBP-216ENST00000428482 LMX1AQ8TE12 382 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 DTD2Q96FN9 168 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 COQ10AQ96MF6 247 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 ZNF641Q96N77 438 aaPredicted RBP10.25□□□□□ -0.77
HDLBP-216ENST00000428482 LENG8Q96PV6 779 aaPredicted RBP10.25□□□□□ -0.77
HDLBP-216ENST00000428482 MCCC1Q96RQ3 725 aaPredicted RBP10.25□□□□□ -0.77
HDLBP-216ENST00000428482 RBM15Q96T37 977 aaKnown RBP eCLIP10.25□□□□□ -0.776e-7■□□□□ 10.8
HDLBP-216ENST00000428482 NAPGQ99747 312 aaPredicted RBP10.25□□□□□ -0.77
HDLBP-216ENST00000428482 TPX2Q9ULW0 747 aaKnown RBP10.25□□□□□ -0.77
HDLBP-216ENST00000428482 ALG6Q9Y672 507 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 APC2O95996 2303 aa10.25□□□□□ -0.77
HDLBP-216ENST00000428482 PKD1L2Q7Z442 2459 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 GOLGA6CA6NDK9 693 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 GOLGA6BA6NDN3 693 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 CAPN8A6NHC0 703 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 MIF4GDA9UHW6 222 aaKnown RBP10.24□□□□□ -0.77
HDLBP-216ENST00000428482 FANCGO15287 622 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 YKT6O15498 198 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 GPR39O43194 453 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 TNFSF14O43557 240 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 CST8O60676 142 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 LDOC1O95751 146 aaPredicted RBP10.24□□□□□ -0.77
HDLBP-216ENST00000428482 MT-CYBP00156 380 aaPredicted RBP10.24□□□□□ -0.77
HDLBP-216ENST00000428482 JCHAINP01591 159 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 CSF2P04141 144 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 GOLGA6DP0CG33 693 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 CCNB1P14635 433 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 TCP1P17987 556 aaKnown RBP10.24□□□□□ -0.77
HDLBP-216ENST00000428482 PTPN3P26045 913 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 CTNNA1P35221 906 aaKnown RBP10.24□□□□□ -0.77
HDLBP-216ENST00000428482 HSPA9P38646 679 aaKnown RBP10.24□□□□□ -0.77
HDLBP-216ENST00000428482 TERF1P54274 439 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 IFI35P80217 286 aaPredicted RBP10.24□□□□□ -0.77
HDLBP-216ENST00000428482 OVGP1Q12889 678 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 ZNF211Q13398 564 aaPredicted RBP10.24□□□□□ -0.77
HDLBP-216ENST00000428482 INPP5AQ14642 412 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 LRRC14Q15048 493 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 ACOX1Q15067 660 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 PCSK7Q16549 785 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 INAVAQ3KP66 663 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 PRRT3Q5FWE3 981 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 PERM1Q5SV97 790 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 ARMC12Q5T9G4 340 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 HES3Q5TGS1 186 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 ESRP1Q6NXG1 681 aaKnown RBP10.24□□□□□ -0.77
HDLBP-216ENST00000428482 DOK6Q6PKX4 331 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 DAAM2Q86T65 1068 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 NT5DC3Q86UY8 548 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 HEATR4Q86WZ0 1026 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 CCDC50Q8IVM0 306 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 KATNAL2Q8IYT4 538 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 CCNYQ8ND76 341 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 OR4C6Q8NH72 309 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 ZCCHC14Q8WYQ9 949 aaKnown RBP10.24□□□□□ -0.77
HDLBP-216ENST00000428482 HES6Q96HZ4 224 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 APOLD1Q96LR9 279 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 AGAP3Q96P47 875 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 QKIQ96PU8 341 aaKnown RBP eCLIP10.24□□□□□ -0.777e-7■□□□□ 9.5
HDLBP-216ENST00000428482 IL12RB2Q99665 862 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 HEMGNQ9BXL5 484 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 TLR10Q9BXR5 811 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 GOLGA6AQ9NYA3 693 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 DONSONQ9NYP3 566 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 UBP1Q9NZI7 540 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 SIRPGQ9P1W8 387 aa10.24□□□□□ -0.77
HDLBP-216ENST00000428482 RALYQ9UKM9 306 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms