RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 PIP4K2CQ8TBX8 421 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 MDM1Q8TC05 714 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 CDKN2AIPNLQ96HQ2 116 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 ZFRQ96KR1 1074 aaKnown RBP7.41□□□□□ -1.22
BDNF-209ENST00000420794 RANBP9Q96S59 729 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 CDH19Q9H159 772 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 MAGEE1Q9HCI5 957 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 POLMQ9NP87 494 aaPredicted RBP7.41□□□□□ -1.22
BDNF-209ENST00000420794 GNPTGQ9UJJ9 305 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 CORO1CQ9ULV4 474 aaPredicted RBP7.41□□□□□ -1.22
BDNF-209ENST00000420794 HS3ST2Q9Y278 367 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 ARL5AQ9Y689 179 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 TANC1Q9C0D5 1861 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 A0A087X1B8 175 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 UPK3BL1B0FP48 263 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 UPK3BL2E5RIL1 263 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 MAN2B1O00754 1011 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 GOT2P00505 430 aaKnown RBP7.41□□□□□ -1.22
BDNF-209ENST00000420794 OGNP20774 298 aaKnown RBP7.41□□□□□ -1.22
BDNF-209ENST00000420794 PRKCHP24723 683 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 GJA4P35212 333 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 SKIV2L2P42285 1042 aaKnown RBP7.41□□□□□ -1.22
BDNF-209ENST00000420794 GPR1P46091 355 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 NEK3P51956 506 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 LIMK2P53671 638 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 GRIN2CQ14957 1233 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 QPCTQ16769 361 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 PUS10Q3MIT2 529 aaKnown RBP7.41□□□□□ -1.22
BDNF-209ENST00000420794 FUT11Q495W5 492 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 EOGTQ5NDL2 527 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 KDELC1Q6UW63 502 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 FAM47EQ6ZV65 393 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 TMEM135Q86UB9 458 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 EXOC3L1Q86VI1 746 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 MMAAQ8IVH4 418 aaKnown RBP7.41□□□□□ -1.22
BDNF-209ENST00000420794 MYO1HQ8N1T3 1032 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 ARRDC2Q8TBH0 407 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 SORCS1Q8WY21 1168 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 GRAMD1AQ96CP6 724 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 TRIM55Q9BYV6 548 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 UBE2ZQ9H832 354 aaPredicted RBP7.41□□□□□ -1.22
BDNF-209ENST00000420794 VWA7Q9Y334 891 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 NUMBLQ9Y6R0 609 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 PIAS3Q9Y6X2 628 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 FAM159BA6NKW6 160 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 TTC34A8MYJ7 566 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 PRMT5O14744 637 aaPredicted RBP7.41□□□□□ -1.22
BDNF-209ENST00000420794 TPP1O14773 563 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 SMAD6O43541 496 aaKnown RBP7.41□□□□□ -1.22
BDNF-209ENST00000420794 PRAMEF1O95521 474 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 HLA-EP13747 358 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 TRAF2Q12933 501 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 STX3Q13277 289 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 TSTA3Q13630 321 aaPredicted RBP7.41□□□□□ -1.22
BDNF-209ENST00000420794 CSHL1Q14406 222 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 RASA2Q15283 850 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 LRIT3Q3SXY7 679 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 FBXO43Q4G163 708 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 ZNF805Q5CZA5 627 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 SYCE2Q6PIF2 218 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 KYAT3Q6YP21 454 aaKnown RBP7.41□□□□□ -1.22
BDNF-209ENST00000420794 IGDCC3Q8IVU1 814 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 ZNF683Q8IZ20 524 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 DCLK2Q8N568 766 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 CCDC197Q8NCU1 140 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 OR13C4Q8NGS5 318 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 TCP10LQ8TDR4 215 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 SPOCK2Q92563 424 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 MYADMQ96S97 322 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 RBBP8Q99708 897 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 POMKQ9H5K3 350 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 NMRAL1Q9HBL8 299 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 ARNT2Q9HBZ2 717 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 IL1RAPL1Q9NZN1 696 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 FKBPLQ9UIM3 349 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 PCDHB1Q9Y5F3 818 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 ACTL7AQ9Y615 435 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 FRMPD3Q5JV73 1810 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 SYCE1LA8MT33 242 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 AGPSO00116 658 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 LEFTY1O75610 366 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 CHEK2O96017 543 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 ALPIP09923 528 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 VCLP18206 1134 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 EIF2DP41214 584 aaKnown RBP7.41□□□□□ -1.22
BDNF-209ENST00000420794 ABCG1P45844 678 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 RAB10P61026 200 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 SF3A3Q12874 501 aaKnown RBP eCLIP7.41□□□□□ -1.22
BDNF-209ENST00000420794 GPR33Q49SQ1 333 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 ZNF776Q68DI1 518 aaPredicted RBP7.41□□□□□ -1.22
BDNF-209ENST00000420794 RAET1GQ6H3X3 334 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 LYSMD3Q7Z3D4 306 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 NKAPQ8N5F7 415 aaKnown RBP7.41□□□□□ -1.22
BDNF-209ENST00000420794 FAM136AQ96C01 138 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 RASSF4Q9H2L5 321 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 POLR3BQ9NW08 1133 aaPredicted RBP7.41□□□□□ -1.22
BDNF-209ENST00000420794 CACNA2D2Q9NY47 1150 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 TSR3Q9UJK0 312 aaKnown RBP7.41□□□□□ -1.22
BDNF-209ENST00000420794 TBC1D3DA0A087WVF3 549 aa7.4□□□□□ -1.22
BDNF-209ENST00000420794 TBC1D3IA0A087WXS9 549 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms