RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 PDE4DIPQ5VU43 2346 aa14.96□□□□□ -0.01
CBX3-202ENST00000396386 MAGEC1O60732 1142 aa14.96□□□□□ -0.01
CBX3-202ENST00000396386 PDHA1P08559 390 aa14.96□□□□□ -0.01
CBX3-202ENST00000396386 TFEBP19484 476 aa14.96□□□□□ -0.01
CBX3-202ENST00000396386 LPOP22079 712 aaPredicted RBP14.96□□□□□ -0.01
CBX3-202ENST00000396386 COPAP53621 1224 aa14.96□□□□□ -0.01
CBX3-202ENST00000396386 ZXDBP98169 803 aa14.96□□□□□ -0.01
CBX3-202ENST00000396386 GPR158Q5T848 1215 aa14.96□□□□□ -0.01
CBX3-202ENST00000396386 ICE2Q659A1 982 aa14.96□□□□□ -0.01
CBX3-202ENST00000396386 FBXO46Q6PJ61 603 aaPredicted RBP14.96□□□□□ -0.01
CBX3-202ENST00000396386 ACAD11Q709F0 780 aa14.96□□□□□ -0.01
CBX3-202ENST00000396386 MFN1Q8IWA4 741 aa14.96□□□□□ -0.01
CBX3-202ENST00000396386 FIBCD1Q8N539 461 aa14.96□□□□□ -0.01
CBX3-202ENST00000396386 EFHBQ8N7U6 833 aa14.96□□□□□ -0.01
CBX3-202ENST00000396386 MDGA1Q8NFP4 955 aa14.96□□□□□ -0.01
CBX3-202ENST00000396386 ARMC5Q96C12 935 aa14.96□□□□□ -0.01
CBX3-202ENST00000396386 CNDP1Q96KN2 507 aa14.96□□□□□ -0.01
CBX3-202ENST00000396386 AARSD1Q9BTE6 412 aaKnown RBP14.96□□□□□ -0.01
CBX3-202ENST00000396386 NOP53Q9NZM5 478 aaKnown RBP14.96□□□□□ -0.01
CBX3-202ENST00000396386 ZDHHC2Q9UIJ5 367 aa14.96□□□□□ -0.01
CBX3-202ENST00000396386 ZNF510Q9Y2H8 683 aa14.96□□□□□ -0.01
CBX3-202ENST00000396386 SH3BP1Q9Y3L3 701 aa14.96□□□□□ -0.01
CBX3-202ENST00000396386 NEMP2A6NFY4 417 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 CCDC85CA6NKD9 419 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 ZBBXA8MT70 800 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 E9PBE3 544 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 GRID2O43424 1007 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 KLHL41O60662 606 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 IPO13O94829 963 aaKnown RBP14.95□□□□□ -0.02
CBX3-202ENST00000396386 PRDX6P30041 224 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 CDC25CP30307 473 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 SLC7A9P82251 487 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 TMEM207Q6UWW9 146 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 GAREM2Q75VX8 874 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 OTOP2Q7RTS6 562 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 ELMOD1Q8N336 334 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 CPXM2Q8N436 756 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 FBXO27Q8NI29 283 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 WFDC5Q8TCV5 224 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 CMTM5Q96DZ9 223 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 OR52B2Q96RD2 323 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 ALG9Q9H6U8 611 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 CYP4F12Q9HCS2 524 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 IL23AQ9NPF7 189 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 MAN1C1Q9NR34 630 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 HACD3Q9P035 362 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 CFAP97Q9P2B7 532 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 DNMT3BQ9UBC3 853 aaKnown RBP14.95□□□□□ -0.02
CBX3-202ENST00000396386 PLA2G4CQ9UP65 541 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 CDYLQ9Y232 598 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 ZNF106Q9H2Y7 1883 aaKnown RBP14.95□□□□□ -0.02
CBX3-202ENST00000396386 TRAV19A0A0A6YYK7 116 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 UBA6A0AVT1 1052 aaPredicted RBP14.95□□□□□ -0.02
CBX3-202ENST00000396386 MEI4A8MW99 385 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 ANKRD66B4E2M5 251 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 NEMP1O14524 444 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 LMNAP02545 664 aaKnown RBP14.95□□□□□ -0.02
CBX3-202ENST00000396386 ADH1AP07327 375 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 C8AP07357 584 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 ZNF37AP17032 561 aaPredicted RBP14.95□□□□□ -0.02
CBX3-202ENST00000396386 GM2AP17900 193 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 RAP1GDS1P52306 607 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 AP1S1P61966 158 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 PDAP1Q13442 181 aaKnown RBP14.95□□□□□ -0.02
CBX3-202ENST00000396386 PREPLQ4J6C6 727 aaPredicted RBP14.95□□□□□ -0.02
CBX3-202ENST00000396386 HS6ST3Q8IZP7 471 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 AFAP1L2Q8N4X5 818 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 MAB21L3Q8N8X9 362 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 TTC16Q8NEE8 873 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 ALG14Q96F25 216 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 TCF12Q99081 682 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 CCDC28BQ9BUN5 200 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 C2orf49Q9BVC5 232 aaPredicted RBP14.95□□□□□ -0.02
CBX3-202ENST00000396386 LRRC3Q9BY71 257 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 NUF2Q9BZD4 464 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 SHCBP1LQ9BZQ2 653 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 CCDC68Q9H2F9 335 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 EML4Q9HC35 981 aaKnown RBP14.95□□□□□ -0.02
CBX3-202ENST00000396386 GTSE1Q9NYZ3 720 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 VPS9D1Q9Y2B5 631 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 FCF1Q9Y324 198 aaKnown RBP14.95□□□□□ -0.02
CBX3-202ENST00000396386 L3MBTL1Q9Y468 752 aa14.95□□□□□ -0.02
CBX3-202ENST00000396386 SCN8AQ9UQD0 1980 aa14.94□□□□□ -0.02
CBX3-202ENST00000396386 GOLGA8QA0A0J9YX86 632 aa14.94□□□□□ -0.02
CBX3-202ENST00000396386 GOLGA8OA6NCC3 632 aa14.94□□□□□ -0.02
CBX3-202ENST00000396386 GOLGA8NF8WBI6 632 aa14.94□□□□□ -0.02
CBX3-202ENST00000396386 DCXO43602 365 aa14.94□□□□□ -0.02
CBX3-202ENST00000396386 NDUFS3O75489 264 aa14.94□□□□□ -0.02
CBX3-202ENST00000396386 PRSS56P0CW18 603 aa14.94□□□□□ -0.02
CBX3-202ENST00000396386 KCNA5P22460 613 aa14.94□□□□□ -0.02
CBX3-202ENST00000396386 NFKB2Q00653 900 aa14.94□□□□□ -0.02
CBX3-202ENST00000396386 NAA25Q14CX7 972 aa14.94□□□□□ -0.02
CBX3-202ENST00000396386 PDCD2Q16342 344 aaPredicted RBP14.94□□□□□ -0.02
CBX3-202ENST00000396386 SH2D4BQ5SQS7 431 aa14.94□□□□□ -0.02
CBX3-202ENST00000396386 HTR3DQ70Z44 454 aa14.94□□□□□ -0.02
CBX3-202ENST00000396386 SPNS2Q8IVW8 549 aa14.94□□□□□ -0.02
CBX3-202ENST00000396386 TTC30BQ8N4P2 665 aa14.94□□□□□ -0.02
CBX3-202ENST00000396386 POU5F2Q8N7G0 328 aa14.94□□□□□ -0.02
CBX3-202ENST00000396386 DDI1Q8WTU0 396 aa14.94□□□□□ -0.02
CBX3-202ENST00000396386 LPGAT1Q92604 370 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms