RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 YBX1P67809 324 aaKnown RBP12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 OGDHQ02218 1023 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 ZNF252P-AS1Q0IIN9 211 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 ZNF517Q6ZMY9 492 aaPredicted RBP12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 TMPRSS9Q7Z410 1059 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 TRIM48Q8IWZ4 208 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 PARP16Q8N5Y8 322 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 SLC7A14Q8TBB6 771 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 PHF10Q8WUB8 498 aaKnown RBP12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 CENPNQ96H22 339 aaPredicted RBP12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 GON7Q9BXV9 100 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 MMP28Q9H239 520 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 SPAG4Q9NPE6 437 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 TBC1D13Q9NVG8 400 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 ERVK13-1Q9NX77 482 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 FAM8A1Q9UBU6 413 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 UBR1Q8IWV7 1749 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 DFFAO00273 331 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 SH3BP5O60239 455 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 TADA2AO75478 443 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 GABARAPO95166 117 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 NTRK1P04629 796 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 PRKCHP24723 683 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 NPY2RP49146 381 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 SNAP25P60880 206 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 GRTP1Q5TC63 336 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 GARNL3Q5VVW2 1013 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 REP15Q6BDI9 236 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 USP51Q70EK9 711 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 ADGRF4Q8IZF3 695 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 ZNF557Q8N988 423 aaPredicted RBP12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 ST13P5Q8NFI4 369 aaPredicted RBP12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 OR9I1Q8NGQ6 314 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 UBASH3BQ8TF42 649 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 CDKL2Q92772 493 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 RIPOR3Q96MK2 946 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 PGLYRP2Q96PD5 576 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 SEPHS2Q99611 448 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 SAV1Q9H4B6 383 aaPredicted RBP12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 TLR9Q9NR96 1032 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 CCM2LQ9NUG4 571 aaPredicted RBP12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 CACNA2D2Q9NY47 1150 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 ANKRD12Q6UB98 2062 aa12.55□□□□□ -0.4
SLC28A1-203ENST00000394573 AGAP5A6NIR3 686 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 ZNF99A8MXY4 864 aaPredicted RBP12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 C9JVG2 144 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 KATNA1O75449 491 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 CYP7B1O75881 506 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 OR5F1O95221 314 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 CHRNA1P02708 482 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 TGM2P21980 687 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 IL10P22301 178 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 PRIM2P49643 509 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 AKR1D1P51857 326 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 ADARB1P78563 741 aaKnown RBP12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 INCA1Q0VD86 236 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 EFR3AQ14156 821 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 GALEQ14376 348 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 MFSD13AQ14CX5 517 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 SKIV2LQ15477 1246 aaKnown RBP12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 GPR68Q15743 365 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 PTCHD3Q3KNS1 767 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 AGKQ53H12 422 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 LIN9Q5TKA1 542 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 MON1BQ7L1V2 547 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 ZNF720Q7Z2F6 126 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 CLEC10AQ8IUN9 316 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 SMG8Q8ND04 991 aaKnown RBP12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 OR8K3Q8NH51 312 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 DHX35Q9H5Z1 703 aaKnown RBP12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 ZBTB20Q9HC78 741 aaPredicted RBP12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 XPNPEP3Q9NQH7 507 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 OPTCQ9UBM4 332 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 EIF3KQ9UBQ5 218 aaKnown RBP12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 ZDHHC2Q9UIJ5 367 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 ZBTB5O15062 677 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 PLA2G6O60733 806 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 USP2O75604 605 aaPredicted RBP12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 PIGNO95427 931 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 KELP23276 732 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 TYK2P29597 1187 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 RPL35P42766 123 aaKnown RBP12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 RFTN1Q14699 578 aaPredicted RBP12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 PYCR3Q53H96 274 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 KIAA1841Q6NSI8 718 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 CASC4Q6P4E1 433 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 DARS2Q6PI48 645 aaKnown RBP12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 LIPIQ6XZB0 460 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 C15orf52Q6ZUT6 534 aaKnown RBP12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 ANKS3Q6ZW76 656 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 P2RY8Q86VZ1 359 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 LRRC39Q96DD0 335 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 GATA5Q9BWX5 397 aaPredicted RBP12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 CEP41Q9BYV8 373 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 NUAK2Q9H093 628 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 ILKAPQ9H0C8 392 aaPredicted RBP12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 RSPH9Q9H1X1 276 aaPredicted RBP12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 ZFP14Q9HCL3 533 aa12.54□□□□□ -0.4
SLC28A1-203ENST00000394573 FBXO28Q9NVF7 368 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms