RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 C19orf43Q9BQ61 176 aa13.18□□□□□ -0.3
TIMP1-202ENST00000377017 TSPYL1Q9H0U9 437 aa13.18□□□□□ -0.3
TIMP1-202ENST00000377017 CDH19Q9H159 772 aa13.18□□□□□ -0.3
TIMP1-202ENST00000377017 IRF2BPLQ9H1B7 796 aa13.18□□□□□ -0.3
TIMP1-202ENST00000377017 PIH1D1Q9NWS0 290 aaKnown RBP13.18□□□□□ -0.3
TIMP1-202ENST00000377017 GRHL1Q9NZI5 618 aa13.18□□□□□ -0.3
TIMP1-202ENST00000377017 INVSQ9Y283 1065 aa13.18□□□□□ -0.3
TIMP1-202ENST00000377017 SPO11Q9Y5K1 396 aa13.18□□□□□ -0.3
TIMP1-202ENST00000377017 TRPM6Q9BX84 2022 aa13.18□□□□□ -0.3
TIMP1-202ENST00000377017 NUMA1Q14980 2115 aa13.18□□□□□ -0.3
TIMP1-202ENST00000377017 ZNF318Q5VUA4 2279 aa13.18□□□□□ -0.3
TIMP1-202ENST00000377017 MAGEB16A2A368 324 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 RGSL1A5PLK6 1076 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 IGLON5A6NGN9 336 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 MEI4A8MW99 385 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 WNT9AO14904 365 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 STX7O15400 261 aaKnown RBP13.17□□□□□ -0.3
TIMP1-202ENST00000377017 RHOBTB1O94844 696 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 FSBPO95073 299 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 LPOP22079 712 aaPredicted RBP13.17□□□□□ -0.3
TIMP1-202ENST00000377017 MGAT1P26572 445 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 HMGCLP35914 325 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 HADHAP40939 763 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 PPP2CBP62714 309 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 PPP2CAP67775 309 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 SEMG2Q02383 582 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 CDKN3Q16667 212 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 TMEM259Q4ZIN3 620 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 CERCAMQ5T4B2 595 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 CASC4Q6P4E1 433 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 CENPUQ71F23 418 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 TMC3Q7Z5M5 1100 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 NRSN1Q8IZ57 195 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 FRMD1Q8N878 549 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 ZBTB44Q8NCP5 570 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 ASB12Q8WXK4 309 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 IFT81Q8WYA0 676 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 PEX13Q92968 403 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 LRRC39Q96DD0 335 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 SMIM14Q96QK8 99 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 HINFPQ9BQA5 517 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 PHACTR1Q9C0D0 580 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 DUSP15Q9H1R2 295 aaPredicted RBP13.17□□□□□ -0.3
TIMP1-202ENST00000377017 C6orf106Q9H6K1 298 aaPredicted RBP13.17□□□□□ -0.3
TIMP1-202ENST00000377017 MRM3Q9HC36 420 aaKnown RBP13.17□□□□□ -0.3
TIMP1-202ENST00000377017 GDF3Q9NR23 364 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 MBD1Q9UIS9 605 aaPredicted RBP13.17□□□□□ -0.3
TIMP1-202ENST00000377017 TCAF1Q9Y4C2 921 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 CEP192Q8TEP8 1941 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 LRRK1Q38SD2 2015 aa13.17□□□□□ -0.3
TIMP1-202ENST00000377017 MYLKQ15746 1914 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 METTL12A8MUP2 240 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 BHMG1C9JSJ3 638 aaPredicted RBP13.16□□□□□ -0.3
TIMP1-202ENST00000377017 EIF3HO15372 352 aaKnown RBP eCLIP13.16□□□□□ -0.3
TIMP1-202ENST00000377017 AVILO75366 819 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 C1SP09871 688 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 BCKDHBP21953 392 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 MCM3P25205 808 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 MAT2AP31153 395 aaKnown RBP13.16□□□□□ -0.3
TIMP1-202ENST00000377017 MAGEA3P43357 314 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 SPINT3P49223 89 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 CREB5Q02930 508 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 PTSQ03393 145 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 MSLNQ13421 630 aaPredicted RBP13.16□□□□□ -0.3
TIMP1-202ENST00000377017 AGERQ15109 404 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 PTPRRQ15256 657 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 SKIDA1Q1XH10 827 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 ZNF284Q2VY69 593 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 BBS9Q3SYG4 887 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 WDR45BQ5MNZ6 344 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 SEL1L3Q68CR1 1132 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 CYP2U1Q7Z449 544 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 HSD11B1LQ7Z5J1 315 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 CCNJLQ8IV13 435 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 TTC30BQ8N4P2 665 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 GPR161Q8N6U8 529 aaKnown RBP13.16□□□□□ -0.3
TIMP1-202ENST00000377017 DENND6BQ8NEG7 585 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 FBXO25Q8TCJ0 367 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 STYXQ8WUJ0 223 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 SNX19Q92543 992 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 NUS1Q96E22 293 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 COQ10AQ96MF6 247 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 HSPA12BQ96MM6 686 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 NAT9Q9BTE0 207 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 C1QTNF2Q9BXJ5 285 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 SLC17A9Q9BYT1 436 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 KCNH6Q9H252 994 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 SYBUQ9NX95 663 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 RIMKLBQ9ULI2 386 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 ZFR2Q9UPR6 939 aaKnown RBP13.16□□□□□ -0.3
TIMP1-202ENST00000377017 DMTF1Q9Y222 760 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.16□□□□□ -0.3
TIMP1-202ENST00000377017 ARL5AQ9Y689 179 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 MAD1L1Q9Y6D9 718 aa13.16□□□□□ -0.3
TIMP1-202ENST00000377017 CUL9Q8IWT3 2517 aa13.15□□□□□ -0.3
TIMP1-202ENST00000377017 THADAQ6YHU6 1953 aa13.15□□□□□ -0.3
TIMP1-202ENST00000377017 SCN8AQ9UQD0 1980 aa13.15□□□□□ -0.3
TIMP1-202ENST00000377017 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.15□□□□□ -0.3
TIMP1-202ENST00000377017 AURKAO14965 403 aa13.15□□□□□ -0.3
TIMP1-202ENST00000377017 TP73O15350 636 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms