RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 LINC00854A0A1B0GVQ3 168 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 PDHXO00330 501 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 BTN3A1O00481 513 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 NME4O00746 187 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 XYLBO75191 536 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 GSNP06396 782 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 ALDOCP09972 364 aaKnown RBP11.8□□□□□ -0.52
MCF2L-202ENST00000375597 ZNF26P17031 533 aaPredicted RBP11.8□□□□□ -0.52
MCF2L-202ENST00000375597 CAPN3P20807 821 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 CDKN1CP49918 316 aaPredicted RBP11.8□□□□□ -0.52
MCF2L-202ENST00000375597 CCL14Q16627 93 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 UGP2Q16851 508 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 CXCL17Q6UXB2 119 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 PIWIL3Q7Z3Z3 882 aaKnown RBP11.8□□□□□ -0.52
MCF2L-202ENST00000375597 TMEM102Q8N9M5 508 aaPredicted RBP11.8□□□□□ -0.52
MCF2L-202ENST00000375597 FNDC5Q8NAU1 212 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 CASP10Q92851 521 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 THUMPD3Q9BV44 507 aaKnown RBP11.8□□□□□ -0.52
MCF2L-202ENST00000375597 INTS7Q9NVH2 962 aaKnown RBP11.8□□□□□ -0.52
MCF2L-202ENST00000375597 MKS1Q9NXB0 559 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 DNAJB4Q9UDY4 337 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 RNF112Q9ULX5 631 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 A8MU76 341 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 LTA4HP09960 611 aaKnown RBP11.8□□□□□ -0.52
MCF2L-202ENST00000375597 IRF1P10914 325 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 DARSP14868 501 aaKnown RBP11.8□□□□□ -0.52
MCF2L-202ENST00000375597 RPS12P25398 132 aaKnown RBP11.8□□□□□ -0.52
MCF2L-202ENST00000375597 FASP25445 335 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 SH3BP2P78314 561 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 PMS2P3Q13401 168 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 TSTA3Q13630 321 aaPredicted RBP11.8□□□□□ -0.52
MCF2L-202ENST00000375597 DCAF4L1Q3SXM0 396 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 FAM91A1Q658Y4 838 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 GALNT10Q86SR1 603 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 SETD3Q86TU7 594 aaPredicted RBP11.8□□□□□ -0.52
MCF2L-202ENST00000375597 ERO1BQ86YB8 467 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 ZDHHC17Q8IUH5 632 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 TWIST2Q8WVJ9 160 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 SLCO4A1Q96BD0 722 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 MYOCQ99972 504 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 MRPL57Q9BQC6 102 aaKnown RBP11.8□□□□□ -0.52
MCF2L-202ENST00000375597 STN1Q9H668 368 aaKnown RBP11.8□□□□□ -0.52
MCF2L-202ENST00000375597 CLK4Q9HAZ1 481 aaKnown RBP11.8□□□□□ -0.52
MCF2L-202ENST00000375597 FANCEQ9HB96 536 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 VWA7Q9Y334 891 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 ST14Q9Y5Y6 855 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 RGPD3A6NKT7 1758 aaPredicted RBP11.8□□□□□ -0.52
MCF2L-202ENST00000375597 RGPD4Q7Z3J3 1758 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 GSTA4O15217 222 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 RSL1D1O76021 490 aaKnown RBP11.8□□□□□ -0.52
MCF2L-202ENST00000375597 IL1BP01584 269 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 MMP3P08254 477 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 ARNTP27540 789 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 MAGEA6P43360 314 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 NPY2RP49146 381 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 MCCD1P59942 119 aaPredicted RBP11.8□□□□□ -0.52
MCF2L-202ENST00000375597 POLD3Q15054 466 aaPredicted RBP11.8□□□□□ -0.52
MCF2L-202ENST00000375597 TSNQ15631 228 aaKnown RBP11.8□□□□□ -0.52
MCF2L-202ENST00000375597 TIGD5Q53EQ6 642 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 AARS2Q5JTZ9 985 aaKnown RBP11.8□□□□□ -0.52
MCF2L-202ENST00000375597 GALNT18Q6P9A2 607 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 KCTD8Q6ZWB6 473 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 PIWIL4Q7Z3Z4 852 aaKnown RBP11.8□□□□□ -0.52
MCF2L-202ENST00000375597 UNC93AQ86WB7 457 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 ZC3H7AQ8IWR0 971 aaKnown RBP11.8□□□□□ -0.52
MCF2L-202ENST00000375597 HMGCLL1Q8TB92 370 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 PTERQ96BW5 349 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 DTNBP1Q96EV8 351 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 HMCESQ96FZ2 354 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 TEX37Q96LM6 180 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 OSBPL11Q9BXB4 747 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 UNC93B1Q9H1C4 597 aa11.8□□□□□ -0.52
MCF2L-202ENST00000375597 EML4Q9HC35 981 aaKnown RBP11.8□□□□□ -0.52
MCF2L-202ENST00000375597 SCHIP1Q9P0W5 487 aaPredicted RBP11.8□□□□□ -0.52
MCF2L-202ENST00000375597 CCL15-CCL14A0A0B4J2E2 113 aa11.79□□□□□ -0.52
MCF2L-202ENST00000375597 NPEPPSL1A6NEC2 478 aa11.79□□□□□ -0.52
MCF2L-202ENST00000375597 ACOT8O14734 319 aa11.79□□□□□ -0.52
MCF2L-202ENST00000375597 AXIN1O15169 862 aa11.79□□□□□ -0.52
MCF2L-202ENST00000375597 SLC25A27O95847 323 aa11.79□□□□□ -0.52
MCF2L-202ENST00000375597 ABCB1P08183 1280 aaPredicted RBP11.79□□□□□ -0.52
MCF2L-202ENST00000375597 UFM1P61960 85 aa11.79□□□□□ -0.52
MCF2L-202ENST00000375597 CCL15Q16663 113 aa11.79□□□□□ -0.52
MCF2L-202ENST00000375597 SAMD4BQ5PRF9 694 aaKnown RBP11.79□□□□□ -0.52
MCF2L-202ENST00000375597 TAPT1Q6NXT6 567 aa11.79□□□□□ -0.52
MCF2L-202ENST00000375597 RAB44Q7Z6P3 723 aaPredicted RBP11.79□□□□□ -0.52
MCF2L-202ENST00000375597 APBB2Q92870 758 aa11.79□□□□□ -0.52
MCF2L-202ENST00000375597 SEMA3CQ99985 751 aa11.79□□□□□ -0.52
MCF2L-202ENST00000375597 C1QTNF1Q9BXJ1 281 aa11.79□□□□□ -0.52
MCF2L-202ENST00000375597 SMURF2Q9HAU4 748 aa11.79□□□□□ -0.52
MCF2L-202ENST00000375597 ZDHHC7Q9NXF8 308 aa11.79□□□□□ -0.52
MCF2L-202ENST00000375597 CD274Q9NZQ7 290 aa11.79□□□□□ -0.52
MCF2L-202ENST00000375597 ZNF112Q9UJU3 913 aa11.79□□□□□ -0.52
MCF2L-202ENST00000375597 PHF24Q9UPV7 400 aa11.79□□□□□ -0.52
MCF2L-202ENST00000375597 NOD1Q9Y239 953 aa11.79□□□□□ -0.52
MCF2L-202ENST00000375597 MYO1GB0I1T2 1018 aa11.79□□□□□ -0.52
MCF2L-202ENST00000375597 CDC7O00311 574 aa11.79□□□□□ -0.52
MCF2L-202ENST00000375597 DIRAS1O95057 198 aa11.79□□□□□ -0.52
MCF2L-202ENST00000375597 UGT1A1P22309 533 aa11.79□□□□□ -0.52
MCF2L-202ENST00000375597 UGT1A4P22310 534 aa11.79□□□□□ -0.52
MCF2L-202ENST00000375597 CA8P35219 290 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms