RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 TUBB6Q9BUF5 446 aa25.01■■□□□ 1.59
CTSA-203ENST00000372459 GATA5Q9BWX5 397 aaPredicted RBP25.01■■□□□ 1.59
CTSA-203ENST00000372459 TDP1Q9NUW8 608 aa25.01■■□□□ 1.59
CTSA-203ENST00000372459 BAIAP2L1Q9UHR4 511 aa25.01■■□□□ 1.59
CTSA-203ENST00000372459 DOCK6Q96HP0 2047 aa25.01■■□□□ 1.59
CTSA-203ENST00000372459 CXorf51AA0A1B0GTR3 108 aa25■■□□□ 1.59
CTSA-203ENST00000372459 SMAD6O43541 496 aaKnown RBP25■■□□□ 1.59
CTSA-203ENST00000372459 CLASP2O75122 1294 aaKnown RBP25■■□□□ 1.59
CTSA-203ENST00000372459 EZRP15311 586 aaKnown RBP25■■□□□ 1.59
CTSA-203ENST00000372459 SLC26A3P40879 764 aa25■■□□□ 1.59
CTSA-203ENST00000372459 GRIA4P48058 902 aa25■■□□□ 1.59
CTSA-203ENST00000372459 CSNK1DP48730 415 aa25■■□□□ 1.59
CTSA-203ENST00000372459 CDKN2DP55273 166 aa25■■□□□ 1.59
CTSA-203ENST00000372459 ASPHQ12797 758 aa25■■□□□ 1.59
CTSA-203ENST00000372459 CTC1Q2NKJ3 1217 aa25■■□□□ 1.59
CTSA-203ENST00000372459 ATG14Q6ZNE5 492 aa25■■□□□ 1.59
CTSA-203ENST00000372459 SPRED2Q7Z698 418 aa25■■□□□ 1.59
CTSA-203ENST00000372459 MYO19Q96H55 970 aa25■■□□□ 1.59
CTSA-203ENST00000372459 SMIM14Q96QK8 99 aa25■■□□□ 1.59
CTSA-203ENST00000372459 MCOLN1Q9GZU1 580 aa25■■□□□ 1.59
CTSA-203ENST00000372459 PNPOQ9NVS9 261 aa25■■□□□ 1.59
CTSA-203ENST00000372459 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP25■■□□□ 1.59
CTSA-203ENST00000372459 CCDC166P0CW27 439 aa25■■□□□ 1.59
CTSA-203ENST00000372459 RASSF2P50749 326 aa25■■□□□ 1.59
CTSA-203ENST00000372459 ALYREFQ86V81 257 aaKnown RBP25■■□□□ 1.59
CTSA-203ENST00000372459 UBXN10Q96LJ8 280 aa25■■□□□ 1.59
CTSA-203ENST00000372459 HAO1Q9UJM8 370 aa25■■□□□ 1.59
CTSA-203ENST00000372459 INTS6Q9UL03 887 aaKnown RBP25■■□□□ 1.59
CTSA-203ENST00000372459 STX7O15400 261 aaKnown RBP24.99■■□□□ 1.59
CTSA-203ENST00000372459 CBX6O95503 412 aa24.99■■□□□ 1.59
CTSA-203ENST00000372459 T-ENOLP0DO92 83 aa24.99■■□□□ 1.59
CTSA-203ENST00000372459 SLC5A9Q2M3M2 681 aa24.99■■□□□ 1.59
CTSA-203ENST00000372459 LMLNQ96KR4 655 aa24.99■■□□□ 1.59
CTSA-203ENST00000372459 RILPQ96NA2 401 aa24.99■■□□□ 1.59
CTSA-203ENST00000372459 TCF12Q99081 682 aa24.99■■□□□ 1.59
CTSA-203ENST00000372459 UNKQ9C0B0 810 aaKnown RBP24.99■■□□□ 1.59
CTSA-203ENST00000372459 FCHO1O14526 889 aa24.98■■□□□ 1.59
CTSA-203ENST00000372459 DLX3O60479 287 aa24.98■■□□□ 1.59
CTSA-203ENST00000372459 HNRNPCL1O60812 293 aaKnown RBP24.98■■□□□ 1.59
CTSA-203ENST00000372459 CCDC22O60826 627 aa24.98■■□□□ 1.59
CTSA-203ENST00000372459 PGLSO95336 258 aa24.98■■□□□ 1.59
CTSA-203ENST00000372459 IGSF6O95976 241 aa24.98■■□□□ 1.59
CTSA-203ENST00000372459 FDXRP22570 491 aa24.98■■□□□ 1.59
CTSA-203ENST00000372459 BCL2L1Q07817 233 aa24.98■■□□□ 1.59
CTSA-203ENST00000372459 ACAP2Q15057 778 aa24.98■■□□□ 1.59
CTSA-203ENST00000372459 PITRM1Q5JRX3 1037 aa24.98■■□□□ 1.59
CTSA-203ENST00000372459 FAM91A1Q658Y4 838 aa24.98■■□□□ 1.59
CTSA-203ENST00000372459 ZNF549Q6P9A3 640 aa24.98■■□□□ 1.59
CTSA-203ENST00000372459 TTC30BQ8N4P2 665 aa24.98■■□□□ 1.59
CTSA-203ENST00000372459 LBHD1Q9BQE6 289 aaPredicted RBP24.98■■□□□ 1.59
CTSA-203ENST00000372459 DRC3Q9H069 523 aa24.98■■□□□ 1.59
CTSA-203ENST00000372459 POLR3BQ9NW08 1133 aaPredicted RBP24.98■■□□□ 1.59
CTSA-203ENST00000372459 EVLQ9UI08 416 aaPredicted RBP24.98■■□□□ 1.59
CTSA-203ENST00000372459 ARHGEF15O94989 841 aa24.98■■□□□ 1.59
CTSA-203ENST00000372459 WISP3O95389 354 aaPredicted RBP24.98■■□□□ 1.59
CTSA-203ENST00000372459 RBP1P09455 135 aa24.98■■□□□ 1.59
CTSA-203ENST00000372459 MYOGP15173 224 aa24.98■■□□□ 1.59
CTSA-203ENST00000372459 ALOX15P16050 662 aaPredicted RBP24.98■■□□□ 1.59
CTSA-203ENST00000372459 TECRLQ5HYJ1 363 aa24.98■■□□□ 1.59
CTSA-203ENST00000372459 CAMK1DQ8IU85 385 aa24.98■■□□□ 1.59
CTSA-203ENST00000372459 OR6K2Q8NGY2 324 aa24.98■■□□□ 1.59
CTSA-203ENST00000372459 RIN3Q8TB24 985 aa24.98■■□□□ 1.59
CTSA-203ENST00000372459 NMUR2Q9GZQ4 415 aa24.98■■□□□ 1.59
CTSA-203ENST00000372459 POPDC3Q9HBV1 291 aa24.98■■□□□ 1.59
CTSA-203ENST00000372459 MAGEE1Q9HCI5 957 aa24.98■■□□□ 1.59
CTSA-203ENST00000372459 DNAJC28Q9NX36 388 aa24.98■■□□□ 1.59
CTSA-203ENST00000372459 DPP7Q9UHL4 492 aa24.98■■□□□ 1.59
CTSA-203ENST00000372459 MCM8Q9UJA3 840 aa24.98■■□□□ 1.59
CTSA-203ENST00000372459 TRIM33Q9UPN9 1127 aa24.98■■□□□ 1.59
CTSA-203ENST00000372459 PENKP01210 267 aaPredicted RBP24.97■■□□□ 1.59
CTSA-203ENST00000372459 RPL26P61254 145 aaKnown RBP24.97■■□□□ 1.59
CTSA-203ENST00000372459 KRT72Q14CN4 511 aa24.97■■□□□ 1.59
CTSA-203ENST00000372459 TMEM25Q86YD3 366 aa24.97■■□□□ 1.59
CTSA-203ENST00000372459 KIF2BQ8N4N8 673 aa24.97■■□□□ 1.59
CTSA-203ENST00000372459 PIH1D2Q8WWB5 315 aa24.97■■□□□ 1.59
CTSA-203ENST00000372459 INPP5DQ92835 1189 aa24.97■■□□□ 1.59
CTSA-203ENST00000372459 EBF4Q9BQW3 602 aa24.97■■□□□ 1.59
CTSA-203ENST00000372459 AARSD1Q9BTE6 412 aaKnown RBP24.97■■□□□ 1.59
CTSA-203ENST00000372459 LRMDAQ9H2I8 198 aa24.97■■□□□ 1.59
CTSA-203ENST00000372459 FKBPLQ9UIM3 349 aa24.97■■□□□ 1.59
CTSA-203ENST00000372459 ZMYM5Q9UJ78 669 aa24.97■■□□□ 1.59
CTSA-203ENST00000372459 RPL26L1Q9UNX3 145 aaKnown RBP24.97■■□□□ 1.59
CTSA-203ENST00000372459 VPS9D1Q9Y2B5 631 aa24.97■■□□□ 1.59
CTSA-203ENST00000372459 ZNF711Q9Y462 761 aa24.97■■□□□ 1.59
CTSA-203ENST00000372459 H7C0S8 307 aa24.96■■□□□ 1.59
CTSA-203ENST00000372459 PFDN6O15212 129 aa24.96■■□□□ 1.59
CTSA-203ENST00000372459 PRSS56P0CW18 603 aa24.96■■□□□ 1.59
CTSA-203ENST00000372459 ATP5F1P24539 256 aaPredicted RBP24.96■■□□□ 1.59
CTSA-203ENST00000372459 HLA-FP30511 346 aa24.96■■□□□ 1.59
CTSA-203ENST00000372459 MC4RP32245 332 aa24.96■■□□□ 1.59
CTSA-203ENST00000372459 NAGLUP54802 743 aa24.96■■□□□ 1.59
CTSA-203ENST00000372459 RCN2Q14257 317 aa24.96■■□□□ 1.59
CTSA-203ENST00000372459 PRSS36Q5K4E3 855 aa24.96■■□□□ 1.59
CTSA-203ENST00000372459 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.96■■□□□ 1.59
CTSA-203ENST00000372459 ZNF781Q8N8C0 355 aa24.96■■□□□ 1.59
CTSA-203ENST00000372459 ANKRD49Q8WVL7 239 aa24.96■■□□□ 1.59
CTSA-203ENST00000372459 ILKAPQ9H0C8 392 aaPredicted RBP24.96■■□□□ 1.59
CTSA-203ENST00000372459 CDH19Q9H159 772 aa24.96■■□□□ 1.59
CTSA-203ENST00000372459 ZDHHC7Q9NXF8 308 aa24.96■■□□□ 1.59
CTSA-203ENST00000372459 TBC1D14Q9P2M4 693 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms