RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 LRRC57Q8N9N7 239 aa20.56■□□□□ 0.88
SMNDC1-201ENST00000369592 ACRBPQ8NEB7 543 aa20.56■□□□□ 0.88
SMNDC1-201ENST00000369592 EXD1Q8NHP7 514 aa20.56■□□□□ 0.88
SMNDC1-201ENST00000369592 APOLD1Q96LR9 279 aa20.56■□□□□ 0.88
SMNDC1-201ENST00000369592 DUSP23Q9BVJ7 150 aa20.56■□□□□ 0.88
SMNDC1-201ENST00000369592 KCTD5Q9NXV2 234 aa20.56■□□□□ 0.88
SMNDC1-201ENST00000369592 SPASTQ9UBP0 616 aa20.56■□□□□ 0.88
SMNDC1-201ENST00000369592 DGKBQ9Y6T7 804 aa20.56■□□□□ 0.88
SMNDC1-201ENST00000369592 APC2O95996 2303 aa20.56■□□□□ 0.88
SMNDC1-201ENST00000369592 FREM2Q5SZK8 3169 aa20.56■□□□□ 0.88
SMNDC1-201ENST00000369592 COL27A1Q8IZC6 1860 aaPredicted RBP20.56■□□□□ 0.88
SMNDC1-201ENST00000369592 ARHGEF17Q96PE2 2063 aaPredicted RBP20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 LMO7DNF2Z398 122 aa20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 FFAR2O15552 330 aa20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 CST8O60676 142 aa20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 ZRANB2O95218 330 aaKnown RBP eCLIP20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 PCCBP05166 539 aa20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 ALPIP09923 528 aa20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 PECAM1P16284 738 aaPredicted RBP20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 NFKBIAP25963 317 aa20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 TEAD1P28347 426 aa20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 CTNNA1P35221 906 aaKnown RBP20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 HK3P52790 923 aa20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 PPARDQ03181 441 aa20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 PTSQ03393 145 aa20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 SLC14A2Q15849 920 aa20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 PPP2R5EQ16537 467 aa20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 TFDP3Q5H9I0 405 aa20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 FAM182AQ5T1J6 154 aa20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 PNCKQ6P2M8 343 aa20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 USP45Q70EL2 814 aa20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 TMPRSS12Q86WS5 348 aa20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 RAVER1Q8IY67 606 aaKnown RBP20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 CACTIN-AS1Q8N1I8 211 aa20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 GALNT15Q8N3T1 639 aa20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 COL26A1Q96A83 441 aa20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 IMP4Q96G21 291 aaKnown RBP20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 WDR92Q96MX6 357 aa20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 TRIB3Q96RU7 358 aa20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 BOCQ9BWV1 1114 aa20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 HAUS2Q9NVX0 235 aa20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 SAE1Q9UBE0 346 aaPredicted RBP20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 APOBEC3BQ9UH17 382 aaKnown RBP20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 CHKBQ9Y259 395 aa20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 PCDHA3Q9Y5H8 950 aa20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 ACACAQ13085 2346 aa20.55■□□□□ 0.88
SMNDC1-201ENST00000369592 A0A0U1RQS6 177 aa20.54■□□□□ 0.88
SMNDC1-201ENST00000369592 TMEM202A6NGA9 273 aa20.54■□□□□ 0.88
SMNDC1-201ENST00000369592 TNFRSF10CO14798 259 aa20.54■□□□□ 0.88
SMNDC1-201ENST00000369592 PPP1R12AO14974 1030 aaPredicted RBP20.54■□□□□ 0.88
SMNDC1-201ENST00000369592 CTPS1P17812 591 aa20.54■□□□□ 0.88
SMNDC1-201ENST00000369592 TGM2P21980 687 aa20.54■□□□□ 0.88
SMNDC1-201ENST00000369592 ETV3P41162 512 aa20.54■□□□□ 0.88
SMNDC1-201ENST00000369592 DYNLT1P63172 113 aa20.54■□□□□ 0.88
SMNDC1-201ENST00000369592 DPTQ07507 201 aa20.54■□□□□ 0.88
SMNDC1-201ENST00000369592 ACOX1Q15067 660 aa20.54■□□□□ 0.88
SMNDC1-201ENST00000369592 ZCCHC8Q6NZY4 707 aaKnown RBP20.54■□□□□ 0.88
SMNDC1-201ENST00000369592 RFLNAQ6ZTI6 216 aa20.54■□□□□ 0.88
SMNDC1-201ENST00000369592 Q6ZVL8 140 aa20.54■□□□□ 0.88
SMNDC1-201ENST00000369592 DAAM2Q86T65 1068 aa20.54■□□□□ 0.88
SMNDC1-201ENST00000369592 NLRP8Q86W28 1048 aa20.54■□□□□ 0.88
SMNDC1-201ENST00000369592 MARCH9Q86YJ5 346 aa20.54■□□□□ 0.88
SMNDC1-201ENST00000369592 LMX1AQ8TE12 382 aa20.54■□□□□ 0.88
SMNDC1-201ENST00000369592 NUS1Q96E22 293 aa20.54■□□□□ 0.88
SMNDC1-201ENST00000369592 HERPUD2Q9BSE4 406 aa20.54■□□□□ 0.88
SMNDC1-201ENST00000369592 ANP32EQ9BTT0 268 aa20.54■□□□□ 0.88
SMNDC1-201ENST00000369592 LGR4Q9BXB1 951 aa20.54■□□□□ 0.88
SMNDC1-201ENST00000369592 TEX101Q9BY14 249 aa20.54■□□□□ 0.88
SMNDC1-201ENST00000369592 USP29Q9HBJ7 922 aa20.54■□□□□ 0.88
SMNDC1-201ENST00000369592 PCDH9Q9HC56 1237 aa20.54■□□□□ 0.88
SMNDC1-201ENST00000369592 CAPN8A6NHC0 703 aa20.53■□□□□ 0.88
SMNDC1-201ENST00000369592 SOD1P00441 154 aa20.53■□□□□ 0.88
SMNDC1-201ENST00000369592 CELA2BP08218 269 aaPredicted RBP20.53■□□□□ 0.88
SMNDC1-201ENST00000369592 ALPPL2P10696 532 aa20.53■□□□□ 0.88
SMNDC1-201ENST00000369592 TSHRP16473 764 aa20.53■□□□□ 0.88
SMNDC1-201ENST00000369592 ZNF30P17039 623 aa20.53■□□□□ 0.88
SMNDC1-201ENST00000369592 PTPN3P26045 913 aa20.53■□□□□ 0.88
SMNDC1-201ENST00000369592 CTNNA2P26232 953 aa20.53■□□□□ 0.88
SMNDC1-201ENST00000369592 HTR1BP28222 390 aa20.53■□□□□ 0.88
SMNDC1-201ENST00000369592 CD86P42081 329 aa20.53■□□□□ 0.88
SMNDC1-201ENST00000369592 STC1P52823 247 aa20.53■□□□□ 0.88
SMNDC1-201ENST00000369592 SRP54P61011 504 aaKnown RBP20.53■□□□□ 0.88
SMNDC1-201ENST00000369592 AP1B1Q10567 949 aa20.53■□□□□ 0.88
SMNDC1-201ENST00000369592 WASHC5Q12768 1159 aa20.53■□□□□ 0.88
SMNDC1-201ENST00000369592 QPCTQ16769 361 aa20.53■□□□□ 0.88
SMNDC1-201ENST00000369592 TEX44Q53QW1 395 aa20.53■□□□□ 0.88
SMNDC1-201ENST00000369592 PRRT3Q5FWE3 981 aa20.53■□□□□ 0.88
SMNDC1-201ENST00000369592 LRRC66Q68CR7 880 aa20.53■□□□□ 0.88
SMNDC1-201ENST00000369592 BBS12Q6ZW61 710 aa20.53■□□□□ 0.88
SMNDC1-201ENST00000369592 BZW1Q7L1Q6 419 aaKnown RBP20.53■□□□□ 0.88
SMNDC1-201ENST00000369592 PAF1Q8N7H5 531 aa20.53■□□□□ 0.88
SMNDC1-201ENST00000369592 OR1E3Q8WZA6 343 aa20.53■□□□□ 0.88
SMNDC1-201ENST00000369592 TSACCQ96A04 125 aaPredicted RBP20.53■□□□□ 0.88
SMNDC1-201ENST00000369592 SLC13A1Q9BZW2 595 aa20.53■□□□□ 0.88
SMNDC1-201ENST00000369592 FGF22Q9HCT0 170 aa20.53■□□□□ 0.88
SMNDC1-201ENST00000369592 EFR3BQ9Y2G0 817 aa20.53■□□□□ 0.88
SMNDC1-201ENST00000369592 A0A0U1RQJ8 604 aa20.52■□□□□ 0.88
SMNDC1-201ENST00000369592 GRID2IPA4D2P6 1211 aa20.52■□□□□ 0.88
SMNDC1-201ENST00000369592 YY2O15391 372 aa20.52■□□□□ 0.88
SMNDC1-201ENST00000369592 RASGRP1O95267 797 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms