RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 HMGCLP35914 325 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 CCNFP41002 786 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 POLR2LP62875 67 aaKnown RBP13.64□□□□□ -0.23
HOXA1-202ENST00000355633 GNGT1P63211 74 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 MPP2Q14168 576 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 HNRNPA1L2Q32P51 320 aaKnown RBP13.64□□□□□ -0.23
HOXA1-202ENST00000355633 BRAT1Q6PJG6 821 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 SERPINA13PQ6UXR4 307 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 CILP2Q8IUL8 1156 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 DCLK2Q8N568 766 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 MGARPQ8TDB4 240 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 SCRN2Q96FV2 425 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 APOPT1Q96IL0 206 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 TMEM245Q9H330 911 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 BPIFA1Q9NP55 256 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 CATSPERZQ9NTU4 200 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 IL17CQ9P0M4 197 aa13.64□□□□□ -0.23
HOXA1-202ENST00000355633 THAP10Q9P2Z0 257 aaPredicted RBP13.64□□□□□ -0.23
HOXA1-202ENST00000355633 MTO1Q9Y2Z2 717 aaKnown RBP13.64□□□□□ -0.23
HOXA1-202ENST00000355633 NPIPB15A6NHN6 443 aaPredicted RBP13.63□□□□□ -0.23
HOXA1-202ENST00000355633 TPP1O14773 563 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 CD3EAPO15446 510 aaKnown RBP13.63□□□□□ -0.23
HOXA1-202ENST00000355633 ALDOAP04075 364 aaKnown RBP13.63□□□□□ -0.23
HOXA1-202ENST00000355633 RPA3P35244 121 aaPredicted RBP13.63□□□□□ -0.23
HOXA1-202ENST00000355633 CD151P48509 253 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 SLC18A1P54219 525 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 MRNIPQ6NTE8 343 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 TPRG1Q6ZUI0 275 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 GALNT7Q86SF2 657 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 GPR150Q8NGU9 434 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 ACMSDQ8TDX5 336 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 PPM1EQ8WY54 764 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 OR8D1Q8WZ84 308 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 SGSM3Q96HU1 749 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 CDX2Q99626 313 aaPredicted RBP13.63□□□□□ -0.23
HOXA1-202ENST00000355633 FBXO6Q9NRD1 293 aaPredicted RBP13.63□□□□□ -0.23
HOXA1-202ENST00000355633 PCMTD2Q9NV79 361 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 MARCH4Q9P2E8 410 aaPredicted RBP13.63□□□□□ -0.23
HOXA1-202ENST00000355633 FKBPLQ9UIM3 349 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 H7C0S8 307 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 COPEO14579 308 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 HAUS5O94927 633 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 CLDN7O95471 211 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 TYK2P29597 1187 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 LEPRP48357 1165 aaKnown RBP13.63□□□□□ -0.23
HOXA1-202ENST00000355633 SERPINB8P50452 374 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 GALK1P51570 392 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 GABPB1Q06547 395 aaPredicted RBP13.63□□□□□ -0.23
HOXA1-202ENST00000355633 LRRC14Q15048 493 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 CDKN3Q16667 212 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 FASTKD1Q53R41 847 aaKnown RBP13.63□□□□□ -0.23
HOXA1-202ENST00000355633 ZNF805Q5CZA5 627 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 C9orf64Q5T6V5 341 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 STK40Q8N2I9 435 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 PLCD3Q8N3E9 789 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 CENPTQ96BT3 561 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 EID2BQ96D98 161 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 MCCC1Q96RQ3 725 aaPredicted RBP13.63□□□□□ -0.23
HOXA1-202ENST00000355633 GPR22Q99680 433 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 P2RY13Q9BPV8 354 aa13.63□□□□□ -0.23
HOXA1-202ENST00000355633 FBRSL1Q9HCM7 1045 aaKnown RBP13.63□□□□□ -0.23
HOXA1-202ENST00000355633 TCF20Q9UGU0 1960 aaKnown RBP13.62□□□□□ -0.23
HOXA1-202ENST00000355633 XIRP2A4UGR9 3374 aa13.62□□□□□ -0.23
HOXA1-202ENST00000355633 TSPAN11A1L157 253 aa13.62□□□□□ -0.23
HOXA1-202ENST00000355633 A8MX80 341 aa13.62□□□□□ -0.23
HOXA1-202ENST00000355633 SHOX2O60902 331 aaPredicted RBP13.62□□□□□ -0.23
HOXA1-202ENST00000355633 ZWINTO95229 277 aa13.62□□□□□ -0.23
HOXA1-202ENST00000355633 PRNPP04156 253 aa13.62□□□□□ -0.23
HOXA1-202ENST00000355633 OGNP20774 298 aaKnown RBP13.62□□□□□ -0.23
HOXA1-202ENST00000355633 MC4RP32245 332 aa13.62□□□□□ -0.23
HOXA1-202ENST00000355633 IL12RB1P42701 662 aa13.62□□□□□ -0.23
HOXA1-202ENST00000355633 EGFLAMQ63HQ2 1017 aa13.62□□□□□ -0.23
HOXA1-202ENST00000355633 CNSTQ6PJW8 725 aa13.62□□□□□ -0.23
HOXA1-202ENST00000355633 CRTC1Q6UUV9 634 aa13.62□□□□□ -0.23
HOXA1-202ENST00000355633 Q7L0L9 218 aa13.62□□□□□ -0.23
HOXA1-202ENST00000355633 SDCCAG8Q86SQ7 713 aaPredicted RBP13.62□□□□□ -0.23
HOXA1-202ENST00000355633 LDB1Q86U70 411 aaPredicted RBP13.62□□□□□ -0.23
HOXA1-202ENST00000355633 TSPAN33Q86UF1 283 aa13.62□□□□□ -0.23
HOXA1-202ENST00000355633 SUGP1Q8IWZ8 645 aaKnown RBP13.62□□□□□ -0.23
HOXA1-202ENST00000355633 TCP10LQ8TDR4 215 aa13.62□□□□□ -0.23
HOXA1-202ENST00000355633 DYDC1Q8WWB3 177 aa13.62□□□□□ -0.23
HOXA1-202ENST00000355633 ATXN2LQ8WWM7 1075 aaKnown RBP13.62□□□□□ -0.23
HOXA1-202ENST00000355633 ISL2Q96A47 359 aa13.62□□□□□ -0.23
HOXA1-202ENST00000355633 C19orf43Q9BQ61 176 aa13.62□□□□□ -0.23
HOXA1-202ENST00000355633 PHF7Q9BWX1 381 aaPredicted RBP13.62□□□□□ -0.23
HOXA1-202ENST00000355633 KCNK12Q9HB15 430 aa13.62□□□□□ -0.23
HOXA1-202ENST00000355633 MLXIPLQ9NP71 852 aa13.62□□□□□ -0.23
HOXA1-202ENST00000355633 SNX15Q9NRS6 342 aa13.62□□□□□ -0.23
HOXA1-202ENST00000355633 MKS1Q9NXB0 559 aa13.62□□□□□ -0.23
HOXA1-202ENST00000355633 PSD3Q9NYI0 1048 aa13.62□□□□□ -0.23
HOXA1-202ENST00000355633 DKK3Q9UBP4 350 aa13.62□□□□□ -0.23
HOXA1-202ENST00000355633 LIMD1Q9UGP4 676 aa13.62□□□□□ -0.23
HOXA1-202ENST00000355633 FNDC3AQ9Y2H6 1198 aaKnown RBP13.62□□□□□ -0.23
HOXA1-202ENST00000355633 STARD13Q9Y3M8 1113 aa13.62□□□□□ -0.23
HOXA1-202ENST00000355633 SCN8AQ9UQD0 1980 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 ANTXRLA6NF34 631 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 TM9SF1O15321 606 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 NFKBIAP25963 317 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 CTHP32929 405 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 NEK3P51956 506 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms