RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 PHTF1Q9UMS5 762 aa16.74■□□□□ 0.27
PDLIM7-201ENST00000355572 CHKBQ9Y259 395 aa16.74■□□□□ 0.27
PDLIM7-201ENST00000355572 ZFYVE26Q68DK2 2539 aa16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 LRRD1A4D1F6 860 aa16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 KCNK1O00180 336 aa16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 MPOP05164 745 aa16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 GP1BAP07359 652 aa16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 ANXA6P08133 673 aa16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 CCNCP24863 283 aa16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 NOP2P46087 812 aaKnown RBP16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 POLD2P49005 469 aa16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 POLR2LP62875 67 aaKnown RBP16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 ADCY2Q08462 1091 aa16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 ITKQ08881 620 aa16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 NR0B2Q15466 257 aa16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 IFI16Q16666 785 aaKnown RBP16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 HS1BP3Q53T59 392 aa16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 ARMC12Q5T9G4 340 aa16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 SLC9A4Q6AI14 798 aa16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 NRROSQ86YC3 692 aa16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 OR56A4Q8NGH8 313 aa16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 RNF25Q96BH1 459 aaPredicted RBP16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 HDAC11Q96DB2 347 aa16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 DCBLD2Q96PD2 775 aa16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 WDR24Q96S15 920 aa16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 RBM15Q96T37 977 aaKnown RBP eCLIP16.73■□□□□ 0.274e-7■■□□□ 11.4
PDLIM7-201ENST00000355572 TDRD1Q9BXT4 1180 aaKnown RBP16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 SUDS3Q9H7L9 328 aaPredicted RBP16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 GULP1Q9UBP9 304 aa16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 PLEKHM1Q9Y4G2 1056 aa16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 PCYT1BQ9Y5K3 369 aaPredicted RBP16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 ENTPD2Q9Y5L3 495 aa16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 AK5Q9Y6K8 562 aa16.73■□□□□ 0.27
PDLIM7-201ENST00000355572 AKR1B15C9JRZ8 316 aaPredicted RBP16.72■□□□□ 0.27
PDLIM7-201ENST00000355572 NOBOXO60393 691 aa16.72■□□□□ 0.27
PDLIM7-201ENST00000355572 KRT7P08729 469 aa16.72■□□□□ 0.27
PDLIM7-201ENST00000355572 TNNT1P13805 278 aa16.72■□□□□ 0.27
PDLIM7-201ENST00000355572 CCNB1P14635 433 aa16.72■□□□□ 0.27
PDLIM7-201ENST00000355572 MARCKSL1P49006 195 aa16.72■□□□□ 0.27
PDLIM7-201ENST00000355572 PTSQ03393 145 aa16.72■□□□□ 0.27
PDLIM7-201ENST00000355572 LRRC66Q68CR7 880 aa16.72■□□□□ 0.27
PDLIM7-201ENST00000355572 SARM1Q6SZW1 724 aa16.72■□□□□ 0.27
PDLIM7-201ENST00000355572 MFSD7Q6UXD7 560 aa16.72■□□□□ 0.27
PDLIM7-201ENST00000355572 TRIM74Q86UV6 250 aa16.72■□□□□ 0.27
PDLIM7-201ENST00000355572 HEATR4Q86WZ0 1026 aa16.72■□□□□ 0.27
PDLIM7-201ENST00000355572 SCAMP4Q969E2 229 aa16.72■□□□□ 0.27
PDLIM7-201ENST00000355572 CCDC74AQ96AQ1 378 aa16.72■□□□□ 0.27
PDLIM7-201ENST00000355572 PRR11Q96HE9 360 aaPredicted RBP16.72■□□□□ 0.27
PDLIM7-201ENST00000355572 CCDC42Q96M95 316 aa16.72■□□□□ 0.27
PDLIM7-201ENST00000355572 CCDC3Q9BQI4 270 aa16.72■□□□□ 0.27
PDLIM7-201ENST00000355572 TEX101Q9BY14 249 aa16.72■□□□□ 0.27
PDLIM7-201ENST00000355572 FRMD8Q9BZ67 464 aaPredicted RBP16.72■□□□□ 0.27
PDLIM7-201ENST00000355572 POLR1EQ9GZS1 481 aaKnown RBP16.72■□□□□ 0.27
PDLIM7-201ENST00000355572 RBSNQ9H1K0 784 aa16.72■□□□□ 0.27
PDLIM7-201ENST00000355572 ABCG8Q9H221 673 aa16.72■□□□□ 0.27
PDLIM7-201ENST00000355572 USP29Q9HBJ7 922 aa16.72■□□□□ 0.27
PDLIM7-201ENST00000355572 CYP4F12Q9HCS2 524 aa16.72■□□□□ 0.27
PDLIM7-201ENST00000355572 PADI4Q9UM07 663 aa16.72■□□□□ 0.27
PDLIM7-201ENST00000355572 TTLL3Q9Y4R7 772 aa16.72■□□□□ 0.27
PDLIM7-201ENST00000355572 DGKBQ9Y6T7 804 aa16.72■□□□□ 0.27
PDLIM7-201ENST00000355572 A0A087WV48 116 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 A0A0J9YYE9 177 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 A0A1W2PQM1 296 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 PRSS38A1L453 326 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 USP12O75317 370 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 TNFP01375 233 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 JCHAINP01591 159 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 TRBC1P01850 177 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 KRT1P04264 644 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 CEACAM5P06731 702 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 CTSEP14091 401 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 COMTP21964 271 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 HTR1BP28222 390 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 DUSP3P51452 185 aaPredicted RBP16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 SKOR1P84550 965 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 PPIDQ08752 370 aaKnown RBP16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 ISXQ2M1V0 245 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 RALGPS1Q5JS13 557 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 B3GNT8Q7Z7M8 397 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 GAS2L3Q86XJ1 694 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 CCDC13Q8IYE1 715 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 BBS5Q8N3I7 341 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 FSTL5Q8N475 847 aaPredicted RBP16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 GPR156Q8NFN8 814 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 NSMCE1Q8WV22 266 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 FATE1Q969F0 183 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 EID2BQ96D98 161 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 ATXN7L3BQ96GX2 97 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 OLFM3Q96PB7 478 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 WDR26Q9H7D7 661 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 ZNHIT6Q9NWK9 470 aaKnown RBP16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 SAE1Q9UBE0 346 aaPredicted RBP16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 GPR34Q9UPC5 381 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 HEY1Q9Y5J3 304 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 FAM208BQ5VWN6 2430 aa16.71■□□□□ 0.27
PDLIM7-201ENST00000355572 ITPR1Q14643 2758 aa16.71■□□□□ 0.26
PDLIM7-201ENST00000355572 RCCD1A6NED2 376 aa16.7■□□□□ 0.26
PDLIM7-201ENST00000355572 CACNB4O00305 520 aaPredicted RBP16.7■□□□□ 0.26
PDLIM7-201ENST00000355572 NTN3O00634 580 aaPredicted RBP16.7■□□□□ 0.26
PDLIM7-201ENST00000355572 CLDN7O95471 211 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms