RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 ADORA2AP29274 412 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 TGFB2P61812 414 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 MTX3Q5HYI7 312 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 CHST15Q7LFX5 561 aaPredicted RBP14.9□□□□□ -0.02
LMX1B-201ENST00000355497 PIGKQ92643 395 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 TDRD1Q9BXT4 1180 aaKnown RBP14.9□□□□□ -0.02
LMX1B-201ENST00000355497 EGFL7Q9UHF1 273 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 MRTO4Q9UKD2 239 aaKnown RBP14.9□□□□□ -0.02
LMX1B-201ENST00000355497 PDE2AO00408 941 aaPredicted RBP14.9□□□□□ -0.02
LMX1B-201ENST00000355497 LYPLA1O75608 230 aaPredicted RBP14.9□□□□□ -0.02
LMX1B-201ENST00000355497 SPATA19Q7Z5L4 167 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 OR4L1Q8NH43 312 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 ADAM2Q99965 735 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 HOPXQ9BPY8 73 aaPredicted RBP14.9□□□□□ -0.02
LMX1B-201ENST00000355497 MYBL2P10244 700 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 TBC1D21Q8IYX1 336 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 HJURPQ8NCD3 748 aaPredicted RBP14.89□□□□□ -0.03
LMX1B-201ENST00000355497 FAM81AQ8TBF8 368 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 SOCS4Q8WXH5 440 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 HSFY1Q96LI6 401 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 PORCNQ9H237 461 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 SEMA3GQ9NS98 782 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 ADGRE2Q9UHX3 823 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 ZNF221Q9UK13 617 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 CORO1CQ9ULV4 474 aaPredicted RBP14.89□□□□□ -0.03
LMX1B-201ENST00000355497 HBS1LQ9Y450 684 aaKnown RBP14.89□□□□□ -0.03
LMX1B-201ENST00000355497 BTNL10A8MVZ5 291 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 ZNF432O94892 652 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 SLC35G4P0C7Q5 338 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 LPOP22079 712 aaPredicted RBP14.89□□□□□ -0.03
LMX1B-201ENST00000355497 PRKCIP41743 596 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 CTSKP43235 329 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 CPSF6Q16630 551 aaKnown RBP eCLIP14.89□□□□□ -0.03
LMX1B-201ENST00000355497 MREGQ8N565 214 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 OR52K2Q8NGK3 314 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 ABHD16BQ9H3Z7 469 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 GPN3Q9UHW5 284 aaPredicted RBP14.89□□□□□ -0.03
LMX1B-201ENST00000355497 A0A087X0B3 334 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 A0A1W2PQ72 361 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 MAP2K7O14733 419 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 LDOC1O95751 146 aaPredicted RBP14.89□□□□□ -0.03
LMX1B-201ENST00000355497 FGBP02675 491 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 MBTD1Q05BQ5 628 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 ADGRA1Q86SQ6 560 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 PIK3C3Q8NEB9 887 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 GAD1Q99259 594 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 MFSD1Q9H3U5 465 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 C8orf4Q9NR00 106 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 KCNE2Q9Y6J6 123 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 SHMT1P34896 483 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 SCNN1GP51170 649 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 MANFP55145 182 aaKnown RBP14.89□□□□□ -0.03
LMX1B-201ENST00000355497 ACVR2BQ13705 512 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 MPPE1Q53F39 396 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 C1GALT1C1Q96EU7 318 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 NPAS2Q99743 824 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 AASDHPPTQ9NRN7 309 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 EXD2Q9NVH0 621 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 SLC27A6Q9Y2P4 619 aa14.89□□□□□ -0.03
LMX1B-201ENST00000355497 THRBP10828 461 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 PRKAR2AP13861 404 aaKnown RBP14.88□□□□□ -0.03
LMX1B-201ENST00000355497 OGNP20774 298 aaKnown RBP14.88□□□□□ -0.03
LMX1B-201ENST00000355497 CES1P23141 567 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 HTR1BP28222 390 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 TNS4Q8IZW8 715 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 GPER1Q99527 375 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 OAS3Q9Y6K5 1087 aaKnown RBP14.88□□□□□ -0.03
LMX1B-201ENST00000355497 APOC1P02654 83 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 SLC7A2P52569 658 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 TYSND1Q2T9J0 566 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 ZFP69Q49AA0 526 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 SLC4A11Q8NBS3 891 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 TM6SF2Q9BZW4 377 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 MARK1Q9P0L2 795 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 CLEC4AQ9UMR7 237 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 PLK4O00444 970 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 PLIN3O60664 434 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 METTL18O95568 372 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 ETS2P15036 469 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 MC4RP32245 332 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 CEBPGP53567 150 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 CPTPQ5TA50 214 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 ZBTB46Q86UZ6 589 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 OR2T12Q8NG77 320 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 ASAH2Q9NR71 780 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 R3HDM2Q9Y2K5 976 aaKnown RBP14.88□□□□□ -0.03
LMX1B-201ENST00000355497 DDX3YO15523 660 aaKnown RBP14.88□□□□□ -0.03
LMX1B-201ENST00000355497 NOS1APO75052 506 aaPredicted RBP14.88□□□□□ -0.03
LMX1B-201ENST00000355497 CALCAP01258 141 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 LGALS2P05162 132 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 NELFEP18615 380 aaKnown RBP14.88□□□□□ -0.03
LMX1B-201ENST00000355497 BTN3A2P78410 334 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 RBFAQ8N0V3 343 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 LNX1Q8TBB1 728 aaPredicted RBP14.88□□□□□ -0.03
LMX1B-201ENST00000355497 PPP1R14BQ96C90 147 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 TRPS1Q9UHF7 1281 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 hCG_1818297A0A087WSY0 165 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 CTPS1P17812 591 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 PPP3CAQ08209 521 aa14.88□□□□□ -0.03
LMX1B-201ENST00000355497 CTBP1Q13363 440 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms