RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 ARNTP27540 789 aa27.09■■□□□ 1.93
SSBP4-202ENST00000348495 PTSQ03393 145 aa27.09■■□□□ 1.93
SSBP4-202ENST00000348495 CASP8Q14790 479 aa27.09■■□□□ 1.93
SSBP4-202ENST00000348495 TRMT10BQ6PF06 316 aaKnown RBP27.09■■□□□ 1.93
SSBP4-202ENST00000348495 HDDC3Q8N4P3 179 aa27.09■■□□□ 1.93
SSBP4-202ENST00000348495 SERBP1Q8NC51 408 aaKnown RBP eCLIP27.09■■□□□ 1.936e-6■■■■■ 47.7
SSBP4-202ENST00000348495 FLCNQ8NFG4 579 aa27.09■■□□□ 1.93
SSBP4-202ENST00000348495 OR13C4Q8NGS5 318 aa27.09■■□□□ 1.93
SSBP4-202ENST00000348495 POLMQ9NP87 494 aaPredicted RBP27.09■■□□□ 1.93
SSBP4-202ENST00000348495 NLE1Q9NVX2 485 aaPredicted RBP27.09■■□□□ 1.93
SSBP4-202ENST00000348495 ITM2BQ9Y287 266 aa27.09■■□□□ 1.93
SSBP4-202ENST00000348495 NUDT17P0C025 328 aa27.08■■□□□ 1.93
SSBP4-202ENST00000348495 ZNF30P17039 623 aa27.08■■□□□ 1.93
SSBP4-202ENST00000348495 PHBP35232 272 aa27.08■■□□□ 1.93
SSBP4-202ENST00000348495 SKIDA1Q1XH10 827 aa27.08■■□□□ 1.93
SSBP4-202ENST00000348495 KIAA0930Q6ICG6 404 aaPredicted RBP27.08■■□□□ 1.93
SSBP4-202ENST00000348495 CBARPQ8N350 705 aaPredicted RBP27.08■■□□□ 1.93
SSBP4-202ENST00000348495 SPEM1Q8N4L4 309 aa27.08■■□□□ 1.93
SSBP4-202ENST00000348495 OR4K2Q8NGD2 314 aa27.08■■□□□ 1.93
SSBP4-202ENST00000348495 DNAJC1Q96KC8 554 aaKnown RBP27.08■■□□□ 1.93
SSBP4-202ENST00000348495 GGT7Q9UJ14 662 aa27.08■■□□□ 1.93
SSBP4-202ENST00000348495 A0A1W2PP55 124 aa27.07■■□□□ 1.92
SSBP4-202ENST00000348495 ARCN1P48444 511 aaKnown RBP27.07■■□□□ 1.92
SSBP4-202ENST00000348495 TAS2R38P59533 333 aa27.07■■□□□ 1.92
SSBP4-202ENST00000348495 ELP6Q0PNE2 266 aa27.07■■□□□ 1.92
SSBP4-202ENST00000348495 CWF19L1Q69YN2 538 aaKnown RBP27.07■■□□□ 1.92
SSBP4-202ENST00000348495 UNC5BQ8IZJ1 945 aa27.07■■□□□ 1.92
SSBP4-202ENST00000348495 IQCKQ8N0W5 287 aa27.07■■□□□ 1.92
SSBP4-202ENST00000348495 FBF1Q8TES7 1133 aa27.07■■□□□ 1.92
SSBP4-202ENST00000348495 ZNF446Q9NWS9 450 aa27.07■■□□□ 1.92
SSBP4-202ENST00000348495 FBXL12Q9NXK8 326 aa27.07■■□□□ 1.92
SSBP4-202ENST00000348495 RABGEF1Q9UJ41 708 aa27.07■■□□□ 1.92
SSBP4-202ENST00000348495 FADS3Q9Y5Q0 445 aa27.07■■□□□ 1.92
SSBP4-202ENST00000348495 SCN8AQ9UQD0 1980 aa27.07■■□□□ 1.92
SSBP4-202ENST00000348495 A0A087WUV0 522 aaPredicted RBP27.07■■□□□ 1.92
SSBP4-202ENST00000348495 AP1G1O43747 822 aa27.07■■□□□ 1.92
SSBP4-202ENST00000348495 SLC4A1P02730 911 aa27.07■■□□□ 1.92
SSBP4-202ENST00000348495 ARSDP51689 593 aa27.07■■□□□ 1.92
SSBP4-202ENST00000348495 STC1P52823 247 aa27.07■■□□□ 1.92
SSBP4-202ENST00000348495 CCDC15Q0P6D6 951 aa27.07■■□□□ 1.92
SSBP4-202ENST00000348495 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP27.07■■□□□ 1.92
SSBP4-202ENST00000348495 USP30Q70CQ3 517 aa27.07■■□□□ 1.92
SSBP4-202ENST00000348495 UHMK1Q8TAS1 419 aaKnown RBP27.07■■□□□ 1.92
SSBP4-202ENST00000348495 BDP1A6H8Y1 2624 aa27.07■■□□□ 1.92
SSBP4-202ENST00000348495 STX7O15400 261 aaKnown RBP27.06■■□□□ 1.92
SSBP4-202ENST00000348495 RNASEH2AO75792 299 aaKnown RBP27.06■■□□□ 1.92
SSBP4-202ENST00000348495 PDGFBP01127 241 aaPredicted RBP27.06■■□□□ 1.92
SSBP4-202ENST00000348495 C1SP09871 688 aa27.06■■□□□ 1.92
SSBP4-202ENST00000348495 STX2P32856 288 aa27.06■■□□□ 1.92
SSBP4-202ENST00000348495 TTC31Q49AM3 519 aaPredicted RBP27.06■■□□□ 1.92
SSBP4-202ENST00000348495 TMEM52BQ4KMG9 183 aa27.06■■□□□ 1.92
SSBP4-202ENST00000348495 ZNF449Q6P9G9 518 aa27.06■■□□□ 1.92
SSBP4-202ENST00000348495 PBXIP1Q96AQ6 731 aa27.06■■□□□ 1.92
SSBP4-202ENST00000348495 CERS2Q96G23 380 aa27.06■■□□□ 1.92
SSBP4-202ENST00000348495 OMDQ99983 421 aa27.06■■□□□ 1.92
SSBP4-202ENST00000348495 ACSS3Q9H6R3 686 aa27.06■■□□□ 1.92
SSBP4-202ENST00000348495 DLGAP2Q9P1A6 1054 aa27.06■■□□□ 1.92
SSBP4-202ENST00000348495 TECTAO75443 2155 aa27.05■■□□□ 1.92
SSBP4-202ENST00000348495 H0Y858 1186 aa27.05■■□□□ 1.92
SSBP4-202ENST00000348495 RPP40O75818 363 aaKnown RBP27.05■■□□□ 1.92
SSBP4-202ENST00000348495 DCNP07585 359 aaKnown RBP27.05■■□□□ 1.92
SSBP4-202ENST00000348495 PAMP19021 973 aa27.05■■□□□ 1.92
SSBP4-202ENST00000348495 ARHGEF7Q14155 803 aa27.05■■□□□ 1.92
SSBP4-202ENST00000348495 LONRF1Q17RB8 773 aa27.05■■□□□ 1.92
SSBP4-202ENST00000348495 LIPIQ6XZB0 460 aa27.05■■□□□ 1.92
SSBP4-202ENST00000348495 HDXQ7Z353 690 aa27.05■■□□□ 1.92
SSBP4-202ENST00000348495 HMGB4Q8WW32 186 aa27.05■■□□□ 1.92
SSBP4-202ENST00000348495 CDKN2AIPNLQ96HQ2 116 aa27.05■■□□□ 1.92
SSBP4-202ENST00000348495 TBATAQ96M53 351 aa27.05■■□□□ 1.92
SSBP4-202ENST00000348495 IER2Q9BTL4 223 aa27.05■■□□□ 1.92
SSBP4-202ENST00000348495 MFSD1Q9H3U5 465 aa27.05■■□□□ 1.92
SSBP4-202ENST00000348495 FZD4Q9ULV1 537 aa27.05■■□□□ 1.92
SSBP4-202ENST00000348495 PKP3Q9Y446 797 aa27.05■■□□□ 1.92
SSBP4-202ENST00000348495 NFS1Q9Y697 457 aa27.05■■□□□ 1.92
SSBP4-202ENST00000348495 CCL22O00626 93 aa27.04■■□□□ 1.92
SSBP4-202ENST00000348495 SLC7A4O43246 635 aa27.04■■□□□ 1.92
SSBP4-202ENST00000348495 VAPBO95292 243 aa27.04■■□□□ 1.92
SSBP4-202ENST00000348495 SHBGP04278 402 aa27.04■■□□□ 1.92
SSBP4-202ENST00000348495 TMPRSS15P98073 1019 aa27.04■■□□□ 1.92
SSBP4-202ENST00000348495 MTAPQ13126 283 aa27.04■■□□□ 1.92
SSBP4-202ENST00000348495 HDAC10Q969S8 669 aa27.04■■□□□ 1.92
SSBP4-202ENST00000348495 BPIFA1Q9NP55 256 aa27.04■■□□□ 1.92
SSBP4-202ENST00000348495 IL1RAPL1Q9NZN1 696 aa27.04■■□□□ 1.92
SSBP4-202ENST00000348495 H7C0S8 307 aa27.04■■□□□ 1.92
SSBP4-202ENST00000348495 HADHAP40939 763 aa27.04■■□□□ 1.92
SSBP4-202ENST00000348495 KIAA1324Q6UXG2 1013 aaKnown RBP27.04■■□□□ 1.92
SSBP4-202ENST00000348495 HSD11B1LQ7Z5J1 315 aa27.04■■□□□ 1.92
SSBP4-202ENST00000348495 KBTBD6Q86V97 674 aa27.04■■□□□ 1.92
SSBP4-202ENST00000348495 TSTD1Q8NFU3 115 aa27.04■■□□□ 1.92
SSBP4-202ENST00000348495 SMYD2Q9NRG4 433 aa27.04■■□□□ 1.92
SSBP4-202ENST00000348495 PLAAQ9Y263 795 aa27.04■■□□□ 1.92
SSBP4-202ENST00000348495 FAM159BA6NKW6 160 aa27.03■■□□□ 1.92
SSBP4-202ENST00000348495 PSMD11O00231 422 aa27.03■■□□□ 1.92
SSBP4-202ENST00000348495 ERVK-10P10266 1014 aa27.03■■□□□ 1.92
SSBP4-202ENST00000348495 MAGEA9P43362 315 aa27.03■■□□□ 1.92
SSBP4-202ENST00000348495 LIG3P49916 1009 aa27.03■■□□□ 1.92
SSBP4-202ENST00000348495 SFSWAPQ12872 951 aaKnown RBP27.03■■□□□ 1.92
SSBP4-202ENST00000348495 PDPK2PQ6A1A2 396 aa27.03■■□□□ 1.92
SSBP4-202ENST00000348495 MAMSTRQ6ZN01 415 aa27.03■■□□□ 1.92
SSBP4-202ENST00000348495 SUDS3Q9H7L9 328 aaPredicted RBP27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms