RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 MARC1Q5VT66 337 aa14.41□□□□□ -0.1
CPSF7-201ENST00000340437 FUNDC1Q8IVP5 155 aa14.41□□□□□ -0.1
CPSF7-201ENST00000340437 OR13C4Q8NGS5 318 aa14.41□□□□□ -0.1
CPSF7-201ENST00000340437 PTERQ96BW5 349 aa14.41□□□□□ -0.1
CPSF7-201ENST00000340437 THAP11Q96EK4 314 aa14.41□□□□□ -0.1
CPSF7-201ENST00000340437 PNPLA3Q9NST1 481 aa14.41□□□□□ -0.1
CPSF7-201ENST00000340437 FAM105AQ9NUU6 356 aa14.41□□□□□ -0.1
CPSF7-201ENST00000340437 SMOXQ9NWM0 555 aa14.41□□□□□ -0.1
CPSF7-201ENST00000340437 NDUFAF1Q9Y375 327 aa14.41□□□□□ -0.1
CPSF7-201ENST00000340437 A0A0U1RQS6 177 aa14.41□□□□□ -0.1
CPSF7-201ENST00000340437 ARL5CA6NH57 179 aa14.41□□□□□ -0.1
CPSF7-201ENST00000340437 E9PAM4 449 aa14.41□□□□□ -0.1
CPSF7-201ENST00000340437 CLOCKO15516 846 aa14.41□□□□□ -0.1
CPSF7-201ENST00000340437 ZNF23P17027 643 aa14.41□□□□□ -0.1
CPSF7-201ENST00000340437 C6orf10Q5SRN2 563 aa14.41□□□□□ -0.1
CPSF7-201ENST00000340437 RAB44Q7Z6P3 723 aaPredicted RBP14.41□□□□□ -0.1
CPSF7-201ENST00000340437 RALGPS2Q86X27 583 aaPredicted RBP14.41□□□□□ -0.1
CPSF7-201ENST00000340437 FIBCD1Q8N539 461 aa14.41□□□□□ -0.1
CPSF7-201ENST00000340437 HMCESQ96FZ2 354 aa14.41□□□□□ -0.1
CPSF7-201ENST00000340437 EXOC2Q96KP1 924 aa14.41□□□□□ -0.1
CPSF7-201ENST00000340437 PAIP1Q9H074 479 aaKnown RBP14.41□□□□□ -0.1
CPSF7-201ENST00000340437 RBM38Q9H0Z9 239 aaKnown RBP14.41□□□□□ -0.1
CPSF7-201ENST00000340437 MRPL40Q9NQ50 206 aaKnown RBP14.41□□□□□ -0.1
CPSF7-201ENST00000340437 EVLQ9UI08 416 aaPredicted RBP14.41□□□□□ -0.1
CPSF7-201ENST00000340437 ACTL7AQ9Y615 435 aa14.41□□□□□ -0.1
CPSF7-201ENST00000340437 A0A1B0GTL3 188 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 A0A1W2PQH9 124 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 H3BNH8 94 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 AP3B1O00203 1094 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 FMO4P31512 558 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 GPR15P49685 360 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 PPP1R8Q12972 351 aaKnown RBP14.4□□□□□ -0.1
CPSF7-201ENST00000340437 MYBPC3Q14896 1274 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 SPATA2LQ8IUW3 424 aaPredicted RBP14.4□□□□□ -0.1
CPSF7-201ENST00000340437 PELI3Q8N2H9 469 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 PDZD8Q8NEN9 1154 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 TWIST2Q8WVJ9 160 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 SMIM14Q96QK8 99 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 TCF12Q99081 682 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 KATNBL1Q9H079 304 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 AP5M1Q9H0R1 490 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 GSTO2Q9H4Y5 243 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 DNAAF2Q9NVR5 837 aaKnown RBP14.4□□□□□ -0.1
CPSF7-201ENST00000340437 DNAJC15Q9Y5T4 150 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 CAPN3P20807 821 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 PSMA4P25789 261 aaKnown RBP14.4□□□□□ -0.1
CPSF7-201ENST00000340437 ADSLP30566 484 aaPredicted RBP14.4□□□□□ -0.1
CPSF7-201ENST00000340437 PSMD7P51665 324 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 SLC5A3P53794 718 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 UNC50Q53HI1 259 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 GAB3Q8WWW8 586 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 PPP1R10Q96QC0 940 aaKnown RBP14.4□□□□□ -0.1
CPSF7-201ENST00000340437 ACOX2Q99424 681 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 MCMBPQ9BTE3 642 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 VPS28Q9UK41 221 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 CDH9Q9ULB4 789 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 ENPP3O14638 875 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 EI24O14681 340 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 SOAT2O75908 522 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 ITGB1P05556 798 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 PFKPQ01813 784 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 APOFQ13790 326 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 RFTN1Q14699 578 aaPredicted RBP14.4□□□□□ -0.1
CPSF7-201ENST00000340437 INTS6LQ5JSJ4 861 aaKnown RBP14.4□□□□□ -0.1
CPSF7-201ENST00000340437 PM20D1Q6GTS8 502 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 XKR5Q6UX68 686 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 TSPAN17Q96FV3 270 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 MEAF6Q9HAF1 191 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 NMUR1Q9HB89 426 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 SLAMF8Q9P0V8 285 aa14.4□□□□□ -0.1
CPSF7-201ENST00000340437 HHLA1C9JL84 531 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 FASP25445 335 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 INPP5AQ14642 412 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 PSMD5Q16401 504 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 IQSEC1Q6DN90 963 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 RANBP10Q6VN20 620 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 BNIPLQ7Z465 357 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 ANKRD23Q86SG2 305 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 MIER2Q8N344 545 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 CALML6Q8TD86 181 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 BHMTQ93088 406 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 FAR2Q96K12 515 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 ZNF597Q96LX8 424 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 RNF145Q96MT1 663 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 AGO3Q9H9G7 860 aaKnown RBP14.39□□□□□ -0.11
CPSF7-201ENST00000340437 POLR1BQ9H9Y6 1135 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 RAD54BQ9Y620 910 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 HS3ST4Q9Y661 456 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 GON4LQ3T8J9 2241 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 TRIM24O15164 1050 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 IRAK2O43187 625 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 B4GAT1O43505 415 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 AXLP30530 894 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 AIF1P55008 147 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 RBBP7Q16576 425 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 ANKDD1AQ495B1 522 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 ALFQ53S48 1182 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 ZNF678Q5SXM1 525 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 KIAA0930Q6ICG6 404 aaPredicted RBP14.39□□□□□ -0.11
CPSF7-201ENST00000340437 OVOS1Q6IE37 1185 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms