RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 GPC4O75487 556 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 NTN1O95631 604 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 ALDH2P05091 517 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 TRIM23P36406 574 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 SLC1A1P43005 524 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 NSFP46459 744 aaKnown RBP5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 PLTPP55058 493 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 SLC8A3P57103 927 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 EFEMP1Q12805 493 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 ANKRD54Q6NXT1 300 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 CHRDL2Q6WN34 429 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 TRIM72Q6ZMU5 477 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 CHSY3Q70JA7 882 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 BEND7Q8N7W2 519 aaPredicted RBP5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 KCNA7Q96RP8 456 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 CDX2Q99626 313 aaPredicted RBP5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 SLAMF7Q9NQ25 335 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 IP6K2Q9UHH9 426 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 POM121BA6NF01 834 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 KRIT1O00522 736 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 ACSL4O60488 711 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 CCNB1P14635 433 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 MMP12P39900 470 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 GALNT3Q14435 633 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 TUBB8Q3ZCM7 444 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 ATP13A5Q4VNC0 1218 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 MED12LQ86YW9 2145 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 EFHBQ8N7U6 833 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 KREMEN2Q8NCW0 462 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 UBE2Q2Q8WVN8 375 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 DNAJC1Q96KC8 554 aaKnown RBP5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 UROC1Q96N76 676 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 AGAP3Q96P47 875 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 GPR22Q99680 433 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 GABRG3Q99928 467 aa5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 NGRNQ9NPE2 291 aaKnown RBP5.64□□□□□ -1.51
TOPBP1-201ENST00000260810 GOLGA6CA6NDK9 693 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 GOLGA6BA6NDN3 693 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 GOLGA6DP0CG33 693 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 LIMK1P53667 647 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 TAS2R39P59534 338 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 PLD1Q13393 1074 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 SMC1AQ14683 1233 aaKnown RBP5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 RPS6KA1Q15418 735 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 OTOAQ7RTW8 1153 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 ADGRF3Q8IZF5 1079 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 TDHQ8IZJ6 230 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 FBF1Q8TES7 1133 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 RNF166Q96A37 237 aaPredicted RBP5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 FSCN3Q9NQT6 498 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 GOLGA6AQ9NYA3 693 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 MBTPS2O43462 519 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 LATO43561 262 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 ZNF354AO60765 605 aaPredicted RBP5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 EGFP01133 1207 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 LEPRP48357 1165 aaKnown RBP5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 BTG3Q14201 252 aaPredicted RBP5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 ZDHHC17Q8IUH5 632 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 RASGEF1AQ8N9B8 481 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 PBKQ96KB5 322 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 PLCD4Q9BRC7 762 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 RTN4RQ9BZR6 473 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 VPS18Q9P253 973 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 ANKRD6Q9Y2G4 727 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 CEP83Q9Y592 693 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 HIVEP3Q5T1R4 2406 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 HECTD1Q9ULT8 2610 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 CCDC162PA2VCL2 907 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 H3BNX3 289 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 DLX3O60479 287 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 TMCC1O94876 653 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 MYBL1P10243 752 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 PNPLA4P41247 253 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 SLCO1A2P46721 670 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 ZIC1Q15915 447 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 USP41Q3LFD5 358 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 NECAB2Q7Z6G3 386 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 RCOR2Q8IZ40 523 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 ESAMQ96AP7 390 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 TSGA10Q9BZW7 698 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 PHACTR1Q9C0D0 580 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 SLC12A4Q9UP95 1085 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 ZNF407Q9C0G0 2248 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 TSPAN3O60637 253 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 CCNCP24863 283 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 RFC2P35250 354 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 SERPINH1P50454 418 aaKnown RBP5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 FHL1Q13642 323 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 IKBKEQ14164 716 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 PARP15Q460N3 678 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 TMEM198Q66K66 360 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 NAF1Q96HR8 494 aaKnown RBP5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 TMEM237Q96Q45 408 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 C1QTNF3Q9BXJ4 246 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 ZNF576Q9H609 170 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 SPC25Q9HBM1 224 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 FBXO6Q9NRD1 293 aaPredicted RBP5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 MARCH2Q9P0N8 246 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 ZDHHC2Q9UIJ5 367 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 USTQ9Y2C2 406 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms