RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 VIPR1P32241 457 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 SERPINB6P35237 376 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 ETV3P41162 512 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 GPR155Q7Z3F1 870 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 HSD11B1LQ7Z5J1 315 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 TSPAN33Q86UF1 283 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 Q8N9G6 341 aaPredicted RBP19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 KCNE4Q8WWG9 221 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 GRAMD1AQ96CP6 724 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 FOXP3Q9BZS1 431 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 CPNE5Q9HCH3 593 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 A0A1W2PQM1 296 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 GOLGA6CA6NDK9 693 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 GOLGA6BA6NDN3 693 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 NPIPB15A6NHN6 443 aaPredicted RBP19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 B4DGG1 531 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 AGRPO00253 132 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 MFSD11O43934 449 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 GOLGA6DP0CG33 693 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 CASP14P31944 242 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 ITKQ08881 620 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 GPR156Q8NFN8 814 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 WDR48Q8TAF3 677 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 ZNF564Q8TBZ8 553 aaPredicted RBP19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 LRRN4Q8WUT4 740 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 GFM1Q96RP9 751 aaKnown RBP19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 EPB41L5Q9HCM4 733 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 GOLGA6AQ9NYA3 693 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 PHTF1Q9UMS5 762 aa19.03■□□□□ 0.64
TM6SF1-201ENST00000258909 A0A1W2PQ67 120 aa19.02■□□□□ 0.63
TM6SF1-201ENST00000258909 TNFSF15O95150 251 aa19.02■□□□□ 0.63
TM6SF1-201ENST00000258909 PGLSO95336 258 aa19.02■□□□□ 0.63
TM6SF1-201ENST00000258909 PDHA1P08559 390 aa19.02■□□□□ 0.63
TM6SF1-201ENST00000258909 HOXC4P09017 264 aaPredicted RBP19.02■□□□□ 0.63
TM6SF1-201ENST00000258909 Q6ZVL8 140 aa19.02■□□□□ 0.63
TM6SF1-201ENST00000258909 HEATR4Q86WZ0 1026 aa19.02■□□□□ 0.63
TM6SF1-201ENST00000258909 WDR36Q8NI36 951 aaKnown RBP19.02■□□□□ 0.63
TM6SF1-201ENST00000258909 PTCD2Q8WV60 388 aaKnown RBP19.02■□□□□ 0.63
TM6SF1-201ENST00000258909 SPOCK2Q92563 424 aa19.02■□□□□ 0.63
TM6SF1-201ENST00000258909 SEMA3CQ99985 751 aa19.02■□□□□ 0.63
TM6SF1-201ENST00000258909 DPEP2Q9H4A9 486 aa19.02■□□□□ 0.63
TM6SF1-201ENST00000258909 CARS2Q9HA77 564 aaKnown RBP19.02■□□□□ 0.63
TM6SF1-201ENST00000258909 ATXN7L1Q9ULK2 861 aaPredicted RBP19.02■□□□□ 0.63
TM6SF1-201ENST00000258909 PCDHGA8Q9Y5G5 932 aa19.02■□□□□ 0.63
TM6SF1-201ENST00000258909 CCDC187A0A096LP49 1063 aa19.01■□□□□ 0.63
TM6SF1-201ENST00000258909 PRSS38A1L453 326 aa19.01■□□□□ 0.63
TM6SF1-201ENST00000258909 TNFRSF10CO14798 259 aa19.01■□□□□ 0.63
TM6SF1-201ENST00000258909 NOBOXO60393 691 aa19.01■□□□□ 0.63
TM6SF1-201ENST00000258909 FUCA1P04066 466 aa19.01■□□□□ 0.63
TM6SF1-201ENST00000258909 CYP2A6P11509 494 aaPredicted RBP19.01■□□□□ 0.63
TM6SF1-201ENST00000258909 MYCLP1P12525 358 aaPredicted RBP19.01■□□□□ 0.63
TM6SF1-201ENST00000258909 ARSEP51690 589 aa19.01■□□□□ 0.63
TM6SF1-201ENST00000258909 DPYSL3Q14195 570 aa19.01■□□□□ 0.63
TM6SF1-201ENST00000258909 HADHQ16836 314 aaKnown RBP19.01■□□□□ 0.63
TM6SF1-201ENST00000258909 ARMC12Q5T9G4 340 aa19.01■□□□□ 0.63
TM6SF1-201ENST00000258909 ARHGAP40Q5TG30 622 aa19.01■□□□□ 0.63
TM6SF1-201ENST00000258909 NCBP2-AS2Q69YL0 99 aa19.01■□□□□ 0.63
TM6SF1-201ENST00000258909 OGFOD3Q6PK18 319 aa19.01■□□□□ 0.63
TM6SF1-201ENST00000258909 IGF2-ASQ6U949 168 aa19.01■□□□□ 0.63
TM6SF1-201ENST00000258909 RFLNAQ6ZTI6 216 aa19.01■□□□□ 0.63
TM6SF1-201ENST00000258909 CBARPQ8N350 705 aaPredicted RBP19.01■□□□□ 0.63
TM6SF1-201ENST00000258909 DTD2Q96FN9 168 aa19.01■□□□□ 0.63
TM6SF1-201ENST00000258909 SCRN2Q96FV2 425 aa19.01■□□□□ 0.63
TM6SF1-201ENST00000258909 PACSIN1Q9BY11 444 aa19.01■□□□□ 0.63
TM6SF1-201ENST00000258909 LRRN3Q9H3W5 708 aa19.01■□□□□ 0.63
TM6SF1-201ENST00000258909 PHPT1Q9NRX4 125 aaPredicted RBP19.01■□□□□ 0.63
TM6SF1-201ENST00000258909 CTTNBP2NLQ9P2B4 639 aa19.01■□□□□ 0.63
TM6SF1-201ENST00000258909 CD84Q9UIB8 345 aa19.01■□□□□ 0.63
TM6SF1-201ENST00000258909 RNF215Q9Y6U7 377 aa19.01■□□□□ 0.63
TM6SF1-201ENST00000258909 CFAP46Q8IYW2 2715 aa19.01■□□□□ 0.63
TM6SF1-201ENST00000258909 D6RAR5 112 aa19■□□□□ 0.63
TM6SF1-201ENST00000258909 HGFP14210 728 aa19■□□□□ 0.63
TM6SF1-201ENST00000258909 POLD2P49005 469 aa19■□□□□ 0.63
TM6SF1-201ENST00000258909 TAS2R40P59535 323 aa19■□□□□ 0.63
TM6SF1-201ENST00000258909 ARHGEF7Q14155 803 aa19■□□□□ 0.63
TM6SF1-201ENST00000258909 IHHQ14623 411 aa19■□□□□ 0.63
TM6SF1-201ENST00000258909 BROXQ5VW32 411 aa19■□□□□ 0.63
TM6SF1-201ENST00000258909 ARL14Q8N4G2 192 aa19■□□□□ 0.63
TM6SF1-201ENST00000258909 TEX26Q8N6G2 289 aa19■□□□□ 0.63
TM6SF1-201ENST00000258909 KCTD6Q8NC69 237 aa19■□□□□ 0.63
TM6SF1-201ENST00000258909 FAM71BQ8TC56 605 aa19■□□□□ 0.63
TM6SF1-201ENST00000258909 PIH1D2Q8WWB5 315 aa19■□□□□ 0.63
TM6SF1-201ENST00000258909 SLC39A7Q92504 469 aa19■□□□□ 0.63
TM6SF1-201ENST00000258909 TEX101Q9BY14 249 aa19■□□□□ 0.63
TM6SF1-201ENST00000258909 XPO4Q9C0E2 1151 aaKnown RBP19■□□□□ 0.63
TM6SF1-201ENST00000258909 SPATS2LQ9NUQ6 558 aaKnown RBP19■□□□□ 0.63
TM6SF1-201ENST00000258909 RCOR3Q9P2K3 495 aaPredicted RBP19■□□□□ 0.63
TM6SF1-201ENST00000258909 LRIT1Q9P2V4 623 aa19■□□□□ 0.63
TM6SF1-201ENST00000258909 NENFQ9UMX5 172 aa19■□□□□ 0.63
TM6SF1-201ENST00000258909 TTLL3Q9Y4R7 772 aa19■□□□□ 0.63
TM6SF1-201ENST00000258909 CDRT15L2A8MXV6 281 aa18.99■□□□□ 0.63
TM6SF1-201ENST00000258909 PDE2AO00408 941 aaPredicted RBP18.99■□□□□ 0.63
TM6SF1-201ENST00000258909 ATXN7O15265 892 aaPredicted RBP18.99■□□□□ 0.63
TM6SF1-201ENST00000258909 CEACAM5P06731 702 aa18.99■□□□□ 0.63
TM6SF1-201ENST00000258909 GARSP41250 739 aaKnown RBP18.99■□□□□ 0.63
TM6SF1-201ENST00000258909 GNPDA1P46926 289 aa18.99■□□□□ 0.63
TM6SF1-201ENST00000258909 TMPRSS3P57727 454 aa18.99■□□□□ 0.63
TM6SF1-201ENST00000258909 DSC2Q02487 901 aa18.99■□□□□ 0.63
TM6SF1-201ENST00000258909 GALNT2Q10471 571 aa18.99■□□□□ 0.63
TM6SF1-201ENST00000258909 C14orf28Q4W4Y0 310 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms