RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 ACADVLP49748 655 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 DPTQ07507 201 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 WASHC5Q12768 1159 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 ZNF211Q13398 564 aaPredicted RBP12.78□□□□□ -0.36
VPREB3-201ENST00000248948 ILKQ13418 452 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 INPP5AQ14642 412 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 PROX2Q3B8N5 592 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 LRRC66Q68CR7 880 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 ZNF662Q6ZS27 426 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 ZNF765Q7L2R6 523 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 CDKL3Q8IVW4 592 aaPredicted RBP12.78□□□□□ -0.36
VPREB3-201ENST00000248948 CBARPQ8N350 705 aaPredicted RBP12.78□□□□□ -0.36
VPREB3-201ENST00000248948 SLC25A45Q8N413 288 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 LPCAT1Q8NF37 534 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 HTR3CQ8WXA8 447 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 HAUS1Q96CS2 278 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 TEKT5Q96M29 485 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 WDR92Q96MX6 357 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 AGAP3Q96P47 875 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 TRIB3Q96RU7 358 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 FERMT1Q9BQL6 677 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 APOOQ9BUR5 198 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 LRRC61Q9BV99 259 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 CEP41Q9BYV8 373 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 SLC13A1Q9BZW2 595 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 USP29Q9HBJ7 922 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 EVA1BQ9NVM1 165 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 UCKL1Q9NWZ5 548 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 NCKIPSDQ9NZQ3 722 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 SPASTQ9UBP0 616 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 CHKBQ9Y259 395 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 PLXNB3Q9ULL4 1909 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 COL27A1Q8IZC6 1860 aaPredicted RBP12.77□□□□□ -0.37
VPREB3-201ENST00000248948 A0A0U1RQJ8 604 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 PDE2AO00408 941 aaPredicted RBP12.77□□□□□ -0.37
VPREB3-201ENST00000248948 TPP1O14773 563 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 SCAMP1O15126 338 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 AQP9O43315 295 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 RFPL3O75679 317 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 RASGRP1O95267 797 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 C1SP09871 688 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 CCDC175P0C221 793 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 ATXN1LP0C7T5 689 aaKnown RBP12.77□□□□□ -0.37
VPREB3-201ENST00000248948 GIMD1P0DJR0 217 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 MYCLP1P12525 358 aaPredicted RBP12.77□□□□□ -0.37
VPREB3-201ENST00000248948 CTPS1P17812 591 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 ETV3P41162 512 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 STC1P52823 247 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 PPARDQ03181 441 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 LLGL1Q15334 1064 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 ALG11Q2TAA5 492 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 CCDC181Q5TID7 509 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 ZCCHC8Q6NZY4 707 aaKnown RBP12.77□□□□□ -0.37
VPREB3-201ENST00000248948 PNCKQ6P2M8 343 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 CRTC1Q6UUV9 634 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 HSD11B1LQ7Z5J1 315 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 TSPAN33Q86UF1 283 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 ZC3H18Q86VM9 953 aaKnown RBP12.77□□□□□ -0.37
VPREB3-201ENST00000248948 LRRC8AQ8IWT6 810 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 SDR16C5Q8N3Y7 309 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 FSTL5Q8N475 847 aaPredicted RBP12.77□□□□□ -0.37
VPREB3-201ENST00000248948 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.77□□□□□ -0.37
VPREB3-201ENST00000248948 FAM181AQ8N9Y4 354 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 PLA2G15Q8NCC3 412 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 ACTL9Q8TC94 416 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 HES6Q96HZ4 224 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 RBM15Q96T37 977 aaKnown RBP eCLIP12.77□□□□□ -0.37
VPREB3-201ENST00000248948 HERPUD2Q9BSE4 406 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 GRPEL1Q9HAV7 217 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 GLOD4Q9HC38 313 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 KLHL8Q9P2G9 620 aaPredicted RBP12.77□□□□□ -0.37
VPREB3-201ENST00000248948 KLQ9UEF7 1012 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 KLF15Q9UIH9 416 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 TRHDEQ9UKU6 1024 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 OR1A2Q9Y585 309 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 DGKBQ9Y6T7 804 aa12.77□□□□□ -0.37
VPREB3-201ENST00000248948 FAM221BA6H8Z2 402 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 GOLGA6L9A6NEM1 432 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 A8MX80 341 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 ANKRD66B4E2M5 251 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 TRIM38O00635 465 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 DDX3YO15523 660 aaKnown RBP12.76□□□□□ -0.37
VPREB3-201ENST00000248948 FFAR2O15552 330 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 SIGLEC6O43699 453 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 HYAL3O43820 417 aaPredicted RBP12.76□□□□□ -0.37
VPREB3-201ENST00000248948 FTCDO95954 541 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 PYGMP11217 842 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 CKMT2P17540 419 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 ACP1P24666 158 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 HK3P52790 923 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 CCZ1BP86790 482 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 CCZ1P86791 482 aaPredicted RBP12.76□□□□□ -0.37
VPREB3-201ENST00000248948 OTUD4Q01804 1114 aaKnown RBP12.76□□□□□ -0.37
VPREB3-201ENST00000248948 QPCTQ16769 361 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 ZNF542PQ5EBM4 170 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 ITPRIPL1Q6GPH6 555 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 TECPR1Q7Z6L1 1165 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 SLCO6A1Q86UG4 719 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 NLRP8Q86W28 1048 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 HEATR4Q86WZ0 1026 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms