RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 HSPA8P11142 646 aaKnown RBP17.3■□□□□ 0.36
USB1-201ENST00000219281 CDK4P11802 303 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 ODC1P11926 461 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 ATP6V1B2P21281 511 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 GPX3P22352 226 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 CD86P42081 329 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 UPP1Q16831 310 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 KIF19Q2TAC6 998 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 ISCA2Q86U28 154 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 EGFL6Q8IUX8 553 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 SCML4Q8N228 414 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 RTL3Q8N8U3 475 aaKnown RBP17.3■□□□□ 0.36
USB1-201ENST00000219281 OR2T34Q8NGX1 318 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 OR2T3Q8NH03 318 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 RMND5BQ96G75 393 aaPredicted RBP17.3■□□□□ 0.36
USB1-201ENST00000219281 ACBD6Q9BR61 282 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 UPF3AQ9H1J1 476 aaKnown RBP17.3■□□□□ 0.36
USB1-201ENST00000219281 AKTIPQ9H8T0 292 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 ARNT2Q9HBZ2 717 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 ABCC13Q9NSE7 274 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 HS3ST4Q9Y661 456 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 SLC4A1P02730 911 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 FLT3LGP49771 235 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 ARSDP51689 593 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 SERINC5Q86VE9 423 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 METTL23Q86XA0 190 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 ANKFN1Q8N957 763 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 GABPB2Q8TAK5 448 aaPredicted RBP17.3■□□□□ 0.36
USB1-201ENST00000219281 HDAC10Q969S8 669 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 L3HYPDHQ96EM0 354 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 KLHL5Q96PQ7 755 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 TRMOQ9BU70 441 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 DUS2Q9NX74 493 aaKnown RBP17.3■□□□□ 0.36
USB1-201ENST00000219281 MARCH4Q9P2E8 410 aaPredicted RBP17.3■□□□□ 0.36
USB1-201ENST00000219281 GIMAP2Q9UG22 337 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 CRYL1Q9Y2S2 319 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 PTGDR2Q9Y5Y4 395 aa17.3■□□□□ 0.36
USB1-201ENST00000219281 SAC3D1A6NKF1 404 aa17.29■□□□□ 0.36
USB1-201ENST00000219281 NR5A2O00482 541 aa17.29■□□□□ 0.36
USB1-201ENST00000219281 CA12O43570 354 aa17.29■□□□□ 0.36
USB1-201ENST00000219281 HTR7P34969 479 aa17.29■□□□□ 0.36
USB1-201ENST00000219281 ALDH3B2P48448 385 aa17.29■□□□□ 0.36
USB1-201ENST00000219281 ACADVLP49748 655 aa17.29■□□□□ 0.36
USB1-201ENST00000219281 ATP4BP51164 291 aa17.29■□□□□ 0.36
USB1-201ENST00000219281 NDST2P52849 883 aa17.29■□□□□ 0.36
USB1-201ENST00000219281 CDH15P55291 814 aa17.29■□□□□ 0.36
USB1-201ENST00000219281 UGT3A2Q3SY77 523 aa17.29■□□□□ 0.36
USB1-201ENST00000219281 AGMOQ6ZNB7 445 aa17.29■□□□□ 0.36
USB1-201ENST00000219281 RYBPQ8N488 228 aaPredicted RBP17.29■□□□□ 0.36
USB1-201ENST00000219281 PCYOX1LQ8NBM8 494 aa17.29■□□□□ 0.36
USB1-201ENST00000219281 OR52K2Q8NGK3 314 aa17.29■□□□□ 0.36
USB1-201ENST00000219281 OR10T2Q8NGX3 314 aa17.29■□□□□ 0.36
USB1-201ENST00000219281 ROPN1LQ96C74 230 aa17.29■□□□□ 0.36
USB1-201ENST00000219281 TRIM62Q9BVG3 475 aa17.29■□□□□ 0.36
USB1-201ENST00000219281 SMOC2Q9H3U7 446 aa17.29■□□□□ 0.36
USB1-201ENST00000219281 NOL6Q9H6R4 1146 aaKnown RBP17.29■□□□□ 0.36
USB1-201ENST00000219281 TIMMDC1Q9NPL8 285 aa17.29■□□□□ 0.36
USB1-201ENST00000219281 KCTD3Q9Y597 815 aa17.29■□□□□ 0.36
USB1-201ENST00000219281 A0A0J9YYE9 177 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 J3KR12 359 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 M0QZ92 97 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 PPP6CO00743 305 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 B3GAT3O94766 335 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 WISP3O95389 354 aaPredicted RBP17.28■□□□□ 0.36
USB1-201ENST00000219281 S1PR4O95977 384 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 PEX11BO96011 259 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 PYGLP06737 847 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 RPL10P27635 214 aaKnown RBP17.28■□□□□ 0.36
USB1-201ENST00000219281 RPL9P32969 192 aaKnown RBP17.28■□□□□ 0.36
USB1-201ENST00000219281 TM4SF4P48230 202 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 SLC5A3P53794 718 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 SH3BP2P78314 561 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 PRAMEP78395 509 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 MGAT3Q09327 533 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 NHSL2Q5HYW2 709 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 PPP4R4Q6NUP7 873 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 ERMP1Q7Z2K6 904 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 CLYBLQ8N0X4 340 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 DIS3LQ8TF46 1054 aaKnown RBP17.28■□□□□ 0.36
USB1-201ENST00000219281 PTERQ96BW5 349 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 IMP4Q96G21 291 aaKnown RBP17.28■□□□□ 0.36
USB1-201ENST00000219281 TCF12Q99081 682 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 ANKRD60Q9BZ19 345 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 LIN28AQ9H9Z2 209 aaKnown RBP17.28■□□□□ 0.36
USB1-201ENST00000219281 ATP13A1Q9HD20 1204 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 HACD3Q9P035 362 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 MAP10Q9P2G4 905 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 AURKCQ9UQB9 309 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 NYNRINQ9P2P1 1898 aaKnown RBP17.28■□□□□ 0.36
USB1-201ENST00000219281 C9JVG2 144 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 NME4O00746 187 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 ADAMTS4O75173 837 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 BMP2P12643 396 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 DSC2Q02487 901 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 PLOD1Q02809 727 aaPredicted RBP17.28■□□□□ 0.36
USB1-201ENST00000219281 IHHQ14623 411 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 VPS26BQ4G0F5 336 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 BEND5Q7L4P6 421 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 TFAP2DQ7Z6R9 452 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 FIBCD1Q8N539 461 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms