RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 MAN1A2O60476 641 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 EPORP19235 508 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 ATP6V1B2P21281 511 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 NFYCQ13952 458 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 ACAP2Q15057 778 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 BBS7Q8IWZ6 715 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 INSIG1O15503 277 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 ZNF8P17098 575 aaPredicted RBP13.76□□□□□ -0.21
SIX4-201ENST00000216513 CMPK1P30085 196 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 SEPHS1P49903 392 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 DEPDC1Q5TB30 811 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 SCARA3Q6AZY7 606 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 GDPD4Q6W3E5 623 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 LRRC55Q6ZSA7 311 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 PMEPA1Q969W9 287 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 PLCH1Q4KWH8 1693 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 IQCF5A8MTL0 148 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 HCRTO43612 131 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 CD72P21854 359 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 NOS3P29474 1203 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 MLLT3P42568 568 aaPredicted RBP13.76□□□□□ -0.21
SIX4-201ENST00000216513 MAPKAPK2P49137 400 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 ALG11Q2TAA5 492 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 MLIPQ5VWP3 458 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 CLEC20AQ6ZU45 233 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 POLNQ7Z5Q5 900 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 C4orf32Q8N8J7 132 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 NCSTNQ92542 709 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 FAM170BA6NMN3 283 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 ITPKAP23677 461 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 CNTFP26441 200 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 YBEYP58557 167 aaPredicted RBP13.76□□□□□ -0.21
SIX4-201ENST00000216513 FAM45BPQ6NSW5 357 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 NKAPQ8N5F7 415 aaKnown RBP13.76□□□□□ -0.21
SIX4-201ENST00000216513 TSEN2Q8NCE0 465 aaKnown RBP13.76□□□□□ -0.21
SIX4-201ENST00000216513 FAM45AQ8TCE6 357 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 LINGO1Q96FE5 620 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 NSL1Q96IY1 281 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 KREMEN1Q96MU8 473 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 GLOD4Q9HC38 313 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 PCDH18Q9HCL0 1135 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 POLG2Q9UHN1 485 aa13.76□□□□□ -0.21
SIX4-201ENST00000216513 LRIG2O94898 1065 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 CCDC166P0CW27 439 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 RALGDSQ12967 914 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 C12orf56Q8IXR9 622 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 TXNDC5Q8NBS9 432 aaKnown RBP13.75□□□□□ -0.21
SIX4-201ENST00000216513 LNX1Q8TBB1 728 aaPredicted RBP13.75□□□□□ -0.21
SIX4-201ENST00000216513 R3HDMLQ9H3Y0 253 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 ERVK-5Q9HDB9 667 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 TMCC3Q9ULS5 477 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 ZNF780BQ9Y6R6 833 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 MMP20O60882 483 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 USP1O94782 785 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 CCDC159P0C7I6 412 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 HOXB8P17481 243 aaPredicted RBP13.75□□□□□ -0.21
SIX4-201ENST00000216513 SERPINB4P48594 390 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 FBXO48Q5FWF7 155 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 TCEAL5Q5H9L2 206 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 IL22RA1Q8N6P7 574 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 FBXO15Q8NCQ5 510 aaPredicted RBP13.75□□□□□ -0.21
SIX4-201ENST00000216513 PHOSPHO2Q8TCD6 241 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 C8orf33Q9H7E9 229 aaPredicted RBP13.75□□□□□ -0.21
SIX4-201ENST00000216513 SASH3O75995 380 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 PIGNO95427 931 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 ASGR2P07307 311 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 ZNF23P17027 643 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 ANGPT1Q15389 498 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 ZBTB46Q86UZ6 589 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 PPP1R14AQ96A00 147 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 ELAC1Q9H777 363 aaKnown RBP13.75□□□□□ -0.21
SIX4-201ENST00000216513 KCNE2Q9Y6J6 123 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 RGPD2P0DJD1 1756 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 PRAMEF1O95521 474 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 CYP1A2P05177 515 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 HSMCR30P0CW71 290 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 ITPKBP27987 946 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 BIKQ13323 160 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 N4BP2L1Q5TBK1 243 aaPredicted RBP13.75□□□□□ -0.21
SIX4-201ENST00000216513 LRIG3Q6UXM1 1119 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 CDCA3Q99618 268 aaPredicted RBP13.75□□□□□ -0.21
SIX4-201ENST00000216513 HMGXB4Q9UGU5 601 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 TP73O15350 636 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 RGS14O43566 566 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 MT-CYBP00156 380 aaPredicted RBP13.75□□□□□ -0.21
SIX4-201ENST00000216513 ADRA1DP25100 572 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 RRM2P31350 389 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 SHHQ15465 462 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 TAF5Q15542 800 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 PAGE2Q7Z2X7 111 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 TNFRSF25Q93038 417 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 TPD52L3Q96J77 140 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 FUCA2Q9BTY2 467 aa13.75□□□□□ -0.21
SIX4-201ENST00000216513 MYOGP15173 224 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 PECAM1P16284 738 aaPredicted RBP13.74□□□□□ -0.21
SIX4-201ENST00000216513 AP1S1P61966 158 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 CTBP1Q13363 440 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 SEL1L3Q68CR1 1132 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 MSANTD2Q6P1R3 559 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 RIBC1Q8N443 379 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms