RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 ZBED2Q9BTP6 218 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 CCDC106Q9BWC9 280 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 ZCCHC2Q9C0B9 1178 aaKnown RBP4.57□□□□□ -1.68
SCN1A-210ENST00000635776 CXorf56Q9H5V9 222 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 A0A0G2JMZ2 1700 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 NEMP1O14524 444 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 INHAP05111 366 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 HLA-DQB2P05538 268 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 FYNP06241 537 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 TPD52P55327 224 aaPredicted RBP4.57□□□□□ -1.68
SCN1A-210ENST00000635776 PHEXP78562 749 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 PDCD2Q16342 344 aaPredicted RBP4.57□□□□□ -1.68
SCN1A-210ENST00000635776 CES3Q6UWW8 571 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 OTOP3Q7RTS5 596 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 SNX32Q86XE0 403 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 TMEM199Q8N511 208 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 PTGR2Q8N8N7 351 aaPredicted RBP4.57□□□□□ -1.68
SCN1A-210ENST00000635776 ATAD1Q8NBU5 361 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 GSTCDQ8NEC7 633 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 FBXO22Q8NEZ5 403 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 HDAC10Q969S8 669 aa4.57□□□□□ -1.68
SCN1A-210ENST00000635776 OTCP00480 354 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 CKMP06732 381 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 ANPEPP15144 967 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 TTKP33981 857 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 CRADDP78560 199 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 IMPG1Q17R60 797 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 ESRP1Q6NXG1 681 aaKnown RBP4.56□□□□□ -1.68
SCN1A-210ENST00000635776 SH2D5Q6ZV89 423 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 SLC41A1Q8IVJ1 513 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 CARNMT1Q8N4J0 409 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 TERB1Q8NA31 727 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 DCAF4L2Q8NA75 395 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 HMCESQ96FZ2 354 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 MCM8Q9UJA3 840 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 LEF1Q9UJU2 399 aaPredicted RBP4.56□□□□□ -1.68
SCN1A-210ENST00000635776 IGLV3-10A0A075B6K4 115 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 A0A1W2PQ45 241 aaPredicted RBP4.56□□□□□ -1.68
SCN1A-210ENST00000635776 A0A1W2PQY0 241 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 ENPP3O14638 875 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 TNFRSF10BO14763 440 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 KDM1AO60341 852 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 AHSGP02765 367 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 TFE3P19532 575 aaPredicted RBP4.56□□□□□ -1.68
SCN1A-210ENST00000635776 SLC1A2P43004 574 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 GLRBP48167 497 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 RBBP5Q15291 538 aaKnown RBP4.56□□□□□ -1.68
SCN1A-210ENST00000635776 CST9Q5W186 159 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 RNF135Q8IUD6 432 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 TEX26Q8N6G2 289 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 KCNJ9Q92806 393 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 EME1Q96AY2 570 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 OTUB2Q96DC9 234 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 TOX2Q96NM4 488 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 TSC22D3Q99576 134 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 IL37Q9NZH6 218 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 MPP6Q9NZW5 540 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 ARMCX1Q9P291 453 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 KLHL42Q9P2K6 505 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 TRAV19A0A0A6YYK7 116 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 ARHGEF15O94989 841 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 PNLIPRP1P54315 467 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 PFKPQ01813 784 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 ZNF33BQ06732 778 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 SMU1Q2TAY7 513 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 CDKL4Q5MAI5 379 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 MPP7Q5T2T1 576 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 MANEALQ5VSG8 457 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 CGB2Q6NT52 195 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 LENG1Q96BZ8 264 aaPredicted RBP4.56□□□□□ -1.68
SCN1A-210ENST00000635776 DTNBP1Q96EV8 351 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 NRBF2Q96F24 287 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 MECRQ9BV79 373 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 DERL2Q9GZP9 239 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 S100A14Q9HCY8 104 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 PNPOQ9NVS9 261 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 NLE1Q9NVX2 485 aaPredicted RBP4.56□□□□□ -1.68
SCN1A-210ENST00000635776 ZNF711Q9Y462 761 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 ORC6Q9Y5N6 252 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 LOC285556D6RIA3 1793 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 SMIM31A0A1B0GVY4 71 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 C16orf96A6NNT2 1141 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 PEX11AO75192 247 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 SLC4A1P02730 911 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 UMPSP11172 480 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 AVPR1AP37288 418 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 CSNK1DP48730 415 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 STC1P52823 247 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 NFKB2Q00653 900 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 LRRC74AQ0VAA2 488 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 CTBP1Q13363 440 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.56□□□□□ -1.68
SCN1A-210ENST00000635776 HIPK3Q9H422 1215 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 TREX1Q9NSU2 369 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 SLC28A1O00337 649 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 MSI1O43347 362 aaKnown RBP4.56□□□□□ -1.68
SCN1A-210ENST00000635776 RGS14O43566 566 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 SOCS5O75159 536 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 CDH2P19022 906 aaPredicted RBP4.56□□□□□ -1.68
SCN1A-210ENST00000635776 CYP2A7P20853 494 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms