RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 KLF11O14901 512 aa9.96□□□□□ -0.81
VTA1-205ENST00000620996 DIAPH2O60879 1101 aa9.96□□□□□ -0.81
VTA1-205ENST00000620996 RPP40O75818 363 aaKnown RBP9.96□□□□□ -0.81
VTA1-205ENST00000620996 GSTA1P08263 222 aa9.96□□□□□ -0.81
VTA1-205ENST00000620996 KCNJ2P63252 427 aa9.96□□□□□ -0.81
VTA1-205ENST00000620996 OCRLQ01968 901 aa9.96□□□□□ -0.81
VTA1-205ENST00000620996 SEMG2Q02383 582 aa9.96□□□□□ -0.81
VTA1-205ENST00000620996 TRAF2Q12933 501 aa9.96□□□□□ -0.81
VTA1-205ENST00000620996 RFTN1Q14699 578 aaPredicted RBP9.96□□□□□ -0.81
VTA1-205ENST00000620996 ZRANB3Q5FWF4 1079 aa9.96□□□□□ -0.81
VTA1-205ENST00000620996 HECTD2Q5U5R9 776 aa9.96□□□□□ -0.81
VTA1-205ENST00000620996 LRRC8EQ6NSJ5 796 aa9.96□□□□□ -0.81
VTA1-205ENST00000620996 RETSATQ6NUM9 610 aa9.96□□□□□ -0.81
VTA1-205ENST00000620996 TAS2R42Q7RTR8 314 aa9.96□□□□□ -0.81
VTA1-205ENST00000620996 SDCCAG8Q86SQ7 713 aaPredicted RBP9.96□□□□□ -0.81
VTA1-205ENST00000620996 TTC7BQ86TV6 843 aa9.96□□□□□ -0.81
VTA1-205ENST00000620996 CILP2Q8IUL8 1156 aa9.96□□□□□ -0.81
VTA1-205ENST00000620996 DRAXINQ8NBI3 349 aaPredicted RBP9.96□□□□□ -0.81
VTA1-205ENST00000620996 PRR11Q96HE9 360 aaPredicted RBP9.96□□□□□ -0.81
VTA1-205ENST00000620996 C7orf26Q96N11 449 aa9.96□□□□□ -0.81
VTA1-205ENST00000620996 RANBP9Q96S59 729 aa9.96□□□□□ -0.81
VTA1-205ENST00000620996 OLFM1Q99784 485 aa9.96□□□□□ -0.81
VTA1-205ENST00000620996 TDRD1Q9BXT4 1180 aaKnown RBP9.96□□□□□ -0.81
VTA1-205ENST00000620996 CCDC68Q9H2F9 335 aa9.96□□□□□ -0.81
VTA1-205ENST00000620996 PIDD1Q9HB75 910 aa9.96□□□□□ -0.81
VTA1-205ENST00000620996 EVLQ9UI08 416 aaPredicted RBP9.96□□□□□ -0.81
VTA1-205ENST00000620996 ANKRD6Q9Y2G4 727 aa9.96□□□□□ -0.81
VTA1-205ENST00000620996 SMAD6O43541 496 aaKnown RBP9.96□□□□□ -0.82
VTA1-205ENST00000620996 DLDP09622 509 aaKnown RBP9.96□□□□□ -0.82
VTA1-205ENST00000620996 CCDC166P0CW27 439 aa9.96□□□□□ -0.82
VTA1-205ENST00000620996 CRABP2P29373 138 aa9.96□□□□□ -0.82
VTA1-205ENST00000620996 CD70P32970 193 aa9.96□□□□□ -0.82
VTA1-205ENST00000620996 PLK1P53350 603 aa9.96□□□□□ -0.82
VTA1-205ENST00000620996 ABCE1P61221 599 aaKnown RBP9.96□□□□□ -0.82
VTA1-205ENST00000620996 LMAN2Q12907 356 aa9.96□□□□□ -0.82
VTA1-205ENST00000620996 CBX2Q14781 532 aaPredicted RBP9.96□□□□□ -0.82
VTA1-205ENST00000620996 MPPE1Q53F39 396 aa9.96□□□□□ -0.82
VTA1-205ENST00000620996 ARHGAP15Q53QZ3 475 aa9.96□□□□□ -0.82
VTA1-205ENST00000620996 CAMK1DQ8IU85 385 aa9.96□□□□□ -0.82
VTA1-205ENST00000620996 CNTN4Q8IWV2 1026 aa9.96□□□□□ -0.82
VTA1-205ENST00000620996 FSTL5Q8N475 847 aaPredicted RBP9.96□□□□□ -0.82
VTA1-205ENST00000620996 MRPL43Q8N983 215 aaKnown RBP9.96□□□□□ -0.82
VTA1-205ENST00000620996 OR4L1Q8NH43 312 aa9.96□□□□□ -0.82
VTA1-205ENST00000620996 GPR63Q9BZJ6 419 aa9.96□□□□□ -0.82
VTA1-205ENST00000620996 ABCB8Q9NUT2 735 aa9.96□□□□□ -0.82
VTA1-205ENST00000620996 STK39Q9UEW8 545 aa9.96□□□□□ -0.82
VTA1-205ENST00000620996 MROH6A6NGR9 719 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 STX7O15400 261 aaKnown RBP9.95□□□□□ -0.82
VTA1-205ENST00000620996 SLC7A4O43246 635 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 PIGNO95427 931 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 ALPIP09923 528 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 FMO4P31512 558 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 CCR10P46092 362 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 BNIP1Q12981 228 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 WLSQ5T9L3 541 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 CYB5D1Q6P9G0 228 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 LILRA6Q6PI73 481 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 SLC30A9Q6PML9 568 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 NAT16Q8N8M0 369 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 SHKBP1Q8TBC3 707 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 HEXDCQ8WVB3 486 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 CLP1Q92989 425 aaKnown RBP9.95□□□□□ -0.82
VTA1-205ENST00000620996 EBF4Q9BQW3 602 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 TRIM4Q9C037 500 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 WWP1Q9H0M0 922 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 MFSD1Q9H3U5 465 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 MID2Q9UJV3 735 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 L3MBTL1Q9Y468 752 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 MYLKQ15746 1914 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 FCHO1O14526 889 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 GRM6O15303 877 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 TRIM13O60858 407 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 SMIM24O75264 130 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 NDUFS3O75489 264 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 RHOP08100 348 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 MAGEA12P43365 314 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 CPA2P48052 419 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 STK19P49842 368 aaPredicted RBP9.95□□□□□ -0.82
VTA1-205ENST00000620996 CLCN5P51795 746 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 NAGLUP54802 743 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 POU4F1Q01851 419 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 VWA5B1Q5TIE3 1220 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 KLC3Q6P597 504 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 Q6ZNB5 142 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 GRASPQ7Z6J2 395 aaPredicted RBP9.95□□□□□ -0.82
VTA1-205ENST00000620996 PIWIL2Q8TC59 973 aaKnown RBP9.95□□□□□ -0.82
VTA1-205ENST00000620996 SCG3Q8WXD2 468 aaKnown RBP9.95□□□□□ -0.82
VTA1-205ENST00000620996 TSPAN17Q96FV3 270 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 MTIF3Q9H2K0 278 aaKnown RBP9.95□□□□□ -0.82
VTA1-205ENST00000620996 KCNK13Q9HB14 408 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 SARS2Q9NP81 518 aaKnown RBP9.95□□□□□ -0.82
VTA1-205ENST00000620996 POLR3BQ9NW08 1133 aaPredicted RBP9.95□□□□□ -0.82
VTA1-205ENST00000620996 FKBPLQ9UIM3 349 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 VWA7Q9Y334 891 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 MTF2Q9Y483 593 aaPredicted RBP9.95□□□□□ -0.82
VTA1-205ENST00000620996 LTBP2Q14767 1821 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 LINC01553A4QN01 128 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 NEMP2A6NFY4 417 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.95□□□□□ -0.82
VTA1-205ENST00000620996 NEMP1O14524 444 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms