RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 IGHV1OR21-1A0A087WYE8 117 aa17.7■□□□□ 0.42
SSBP4-207ENST00000600244 CXorf51AA0A1B0GTR3 108 aa17.7■□□□□ 0.42
SSBP4-207ENST00000600244 TNFRSF10CO14798 259 aa17.7■□□□□ 0.42
SSBP4-207ENST00000600244 GLI1P08151 1106 aa17.7■□□□□ 0.42
SSBP4-207ENST00000600244 STX17P56962 302 aa17.7■□□□□ 0.42
SSBP4-207ENST00000600244 NME3Q13232 169 aa17.7■□□□□ 0.42
SSBP4-207ENST00000600244 MTM1Q13496 603 aa17.7■□□□□ 0.42
SSBP4-207ENST00000600244 MAP7Q14244 749 aa17.7■□□□□ 0.42
SSBP4-207ENST00000600244 ERV3-1Q14264 604 aa17.7■□□□□ 0.42
SSBP4-207ENST00000600244 TMEM135Q86UB9 458 aa17.7■□□□□ 0.42
SSBP4-207ENST00000600244 OR2AP1Q8NGE2 309 aa17.7■□□□□ 0.42
SSBP4-207ENST00000600244 KAT5Q92993 513 aa17.7■□□□□ 0.42
SSBP4-207ENST00000600244 FUBP1Q96AE4 644 aaKnown RBP17.7■□□□□ 0.42
SSBP4-207ENST00000600244 ARHGEF38Q9NXL2 777 aa17.7■□□□□ 0.42
SSBP4-207ENST00000600244 SLC5A6Q9Y289 635 aa17.7■□□□□ 0.42
SSBP4-207ENST00000600244 OAS3Q9Y6K5 1087 aaKnown RBP17.7■□□□□ 0.42
SSBP4-207ENST00000600244 PPM1DO15297 605 aa17.69■□□□□ 0.42
SSBP4-207ENST00000600244 ECEL1O95672 775 aa17.69■□□□□ 0.42
SSBP4-207ENST00000600244 GSRP00390 522 aa17.69■□□□□ 0.42
SSBP4-207ENST00000600244 KIAA1024LP59773 190 aa17.69■□□□□ 0.42
SSBP4-207ENST00000600244 GDPD4Q6W3E5 623 aa17.69■□□□□ 0.42
SSBP4-207ENST00000600244 NRROSQ86YC3 692 aa17.69■□□□□ 0.42
SSBP4-207ENST00000600244 ESX1Q8N693 406 aa17.69■□□□□ 0.42
SSBP4-207ENST00000600244 ZDHHC1Q8WTX9 485 aa17.69■□□□□ 0.42
SSBP4-207ENST00000600244 C5orf34Q96MH7 638 aa17.69■□□□□ 0.42
SSBP4-207ENST00000600244 CEP63Q96MT8 703 aa17.69■□□□□ 0.42
SSBP4-207ENST00000600244 SLC29A3Q9BZD2 475 aa17.69■□□□□ 0.42
SSBP4-207ENST00000600244 UNKQ9C0B0 810 aaKnown RBP17.69■□□□□ 0.42
SSBP4-207ENST00000600244 APMAPQ9HDC9 416 aa17.69■□□□□ 0.42
SSBP4-207ENST00000600244 MLXIPLQ9NP71 852 aa17.69■□□□□ 0.42
SSBP4-207ENST00000600244 ASNSD1Q9NWL6 643 aa17.69■□□□□ 0.42
SSBP4-207ENST00000600244 ENTPD4Q9Y227 616 aa17.69■□□□□ 0.42
SSBP4-207ENST00000600244 CETN3O15182 167 aa17.68■□□□□ 0.42
SSBP4-207ENST00000600244 DNAJB5O75953 348 aa17.68■□□□□ 0.42
SSBP4-207ENST00000600244 MAN1A1P33908 653 aa17.68■□□□□ 0.42
SSBP4-207ENST00000600244 SNRPD1P62314 119 aaKnown RBP17.68■□□□□ 0.42
SSBP4-207ENST00000600244 GNA12Q03113 381 aa17.68■□□□□ 0.42
SSBP4-207ENST00000600244 NAA30Q147X3 362 aaPredicted RBP17.68■□□□□ 0.42
SSBP4-207ENST00000600244 MEA1Q16626 185 aa17.68■□□□□ 0.42
SSBP4-207ENST00000600244 OTUD1Q5VV17 481 aaPredicted RBP17.68■□□□□ 0.42
SSBP4-207ENST00000600244 ARHGAP22Q7Z5H3 698 aa17.68■□□□□ 0.42
SSBP4-207ENST00000600244 Q8NA96 180 aa17.68■□□□□ 0.42
SSBP4-207ENST00000600244 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.68■□□□□ 0.42
SSBP4-207ENST00000600244 PLA2G15Q8NCC3 412 aa17.68■□□□□ 0.42
SSBP4-207ENST00000600244 ENOX1Q8TC92 643 aaKnown RBP17.68■□□□□ 0.42
SSBP4-207ENST00000600244 ARHGEF2Q92974 986 aaKnown RBP17.68■□□□□ 0.42
SSBP4-207ENST00000600244 POM121Q96HA1 1249 aa17.68■□□□□ 0.42
SSBP4-207ENST00000600244 C1orf74Q96LT6 269 aa17.68■□□□□ 0.42
SSBP4-207ENST00000600244 BPIFA3Q9BQP9 254 aa17.68■□□□□ 0.42
SSBP4-207ENST00000600244 TRIM55Q9BYV6 548 aa17.68■□□□□ 0.42
SSBP4-207ENST00000600244 TKTL2Q9H0I9 626 aa17.68■□□□□ 0.42
SSBP4-207ENST00000600244 CSMD2Q7Z408 3487 aa17.68■□□□□ 0.42
SSBP4-207ENST00000600244 RECKO95980 971 aa17.67■□□□□ 0.42
SSBP4-207ENST00000600244 PCCBP05166 539 aa17.67■□□□□ 0.42
SSBP4-207ENST00000600244 HOXC4P09017 264 aaPredicted RBP17.67■□□□□ 0.42
SSBP4-207ENST00000600244 EPB41P11171 864 aaKnown RBP17.67■□□□□ 0.42
SSBP4-207ENST00000600244 CCNB1P14635 433 aa17.67■□□□□ 0.42
SSBP4-207ENST00000600244 DLSTP36957 453 aa17.67■□□□□ 0.42
SSBP4-207ENST00000600244 STAT1P42224 750 aa17.67■□□□□ 0.42
SSBP4-207ENST00000600244 LEPRP48357 1165 aaKnown RBP17.67■□□□□ 0.42
SSBP4-207ENST00000600244 CXCR3P49682 368 aa17.67■□□□□ 0.42
SSBP4-207ENST00000600244 SUOXP51687 545 aa17.67■□□□□ 0.42
SSBP4-207ENST00000600244 SEMA5AQ13591 1074 aa17.67■□□□□ 0.42
SSBP4-207ENST00000600244 ANO6Q4KMQ2 910 aa17.67■□□□□ 0.42
SSBP4-207ENST00000600244 EFHC1Q5JVL4 640 aa17.67■□□□□ 0.42
SSBP4-207ENST00000600244 TCERG1LQ5VWI1 586 aa17.67■□□□□ 0.42
SSBP4-207ENST00000600244 TP53INP2Q8IXH6 220 aa17.67■□□□□ 0.42
SSBP4-207ENST00000600244 PATE1Q8WXA2 126 aa17.67■□□□□ 0.42
SSBP4-207ENST00000600244 PIGVQ9NUD9 493 aa17.67■□□□□ 0.42
SSBP4-207ENST00000600244 DOCK4Q8N1I0 1966 aa17.67■□□□□ 0.42
SSBP4-207ENST00000600244 NAV3Q8IVL0 2385 aa17.66■□□□□ 0.42
SSBP4-207ENST00000600244 ARHGAP10A1A4S6 786 aa17.66■□□□□ 0.42
SSBP4-207ENST00000600244 CACNB4O00305 520 aaPredicted RBP17.66■□□□□ 0.42
SSBP4-207ENST00000600244 SLC16A3O15427 465 aaKnown RBP17.66■□□□□ 0.42
SSBP4-207ENST00000600244 HSF2BPO75031 334 aa17.66■□□□□ 0.42
SSBP4-207ENST00000600244 GRAP2O75791 330 aa17.66■□□□□ 0.42
SSBP4-207ENST00000600244 CBX6O95503 412 aa17.66■□□□□ 0.42
SSBP4-207ENST00000600244 KELP23276 732 aa17.66■□□□□ 0.42
SSBP4-207ENST00000600244 PGDP52209 483 aa17.66■□□□□ 0.42
SSBP4-207ENST00000600244 MARSP56192 900 aaKnown RBP17.66■□□□□ 0.42
SSBP4-207ENST00000600244 POLD3Q15054 466 aaPredicted RBP17.66■□□□□ 0.42
SSBP4-207ENST00000600244 DCAF17Q5H9S7 520 aaPredicted RBP17.66■□□□□ 0.42
SSBP4-207ENST00000600244 BRMS1LQ5PSV4 323 aa17.66■□□□□ 0.42
SSBP4-207ENST00000600244 ATXN7L2Q5T6C5 722 aaPredicted RBP17.66■□□□□ 0.42
SSBP4-207ENST00000600244 PAPD7Q5XG87 772 aaKnown RBP17.66■□□□□ 0.42
SSBP4-207ENST00000600244 LRRC31Q6UY01 552 aa17.66■□□□□ 0.42
SSBP4-207ENST00000600244 WDCPQ9H6R7 721 aa17.66■□□□□ 0.42
SSBP4-207ENST00000600244 TAAR2Q9P1P5 351 aa17.66■□□□□ 0.42
SSBP4-207ENST00000600244 PCDHGA9Q9Y5G4 932 aaKnown RBP17.66■□□□□ 0.42
SSBP4-207ENST00000600244 VARSP26640 1264 aaKnown RBP17.65■□□□□ 0.42
SSBP4-207ENST00000600244 TRIM23P36406 574 aa17.65■□□□□ 0.42
SSBP4-207ENST00000600244 ACVRL1P37023 503 aa17.65■□□□□ 0.42
SSBP4-207ENST00000600244 GPLD1P80108 840 aa17.65■□□□□ 0.42
SSBP4-207ENST00000600244 ELP6Q0PNE2 266 aa17.65■□□□□ 0.42
SSBP4-207ENST00000600244 PDCLQ13371 301 aa17.65■□□□□ 0.42
SSBP4-207ENST00000600244 NAGSQ8N159 534 aa17.65■□□□□ 0.42
SSBP4-207ENST00000600244 PPM1KQ8N3J5 372 aa17.65■□□□□ 0.42
SSBP4-207ENST00000600244 NT5C1BQ96P26 610 aa17.65■□□□□ 0.42
SSBP4-207ENST00000600244 LGR4Q9BXB1 951 aa17.65■□□□□ 0.42
SSBP4-207ENST00000600244 METTL14Q9HCE5 456 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms