RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 MARC1Q5VT66 337 aa13.81□□□□□ -0.2
SCAF1-203ENST00000598359 DENND2CQ68D51 928 aa13.81□□□□□ -0.2
SCAF1-203ENST00000598359 ZCCHC8Q6NZY4 707 aaKnown RBP13.81□□□□□ -0.2
SCAF1-203ENST00000598359 H2AFVQ71UI9 128 aa13.81□□□□□ -0.2
SCAF1-203ENST00000598359 DPPA4Q7L190 304 aa13.81□□□□□ -0.2
SCAF1-203ENST00000598359 EFL1Q7Z2Z2 1120 aaKnown RBP13.81□□□□□ -0.2
SCAF1-203ENST00000598359 FAM71BQ8TC56 605 aa13.81□□□□□ -0.2
SCAF1-203ENST00000598359 BTN2A2Q8WVV5 523 aa13.81□□□□□ -0.2
SCAF1-203ENST00000598359 HNRNPLLQ8WVV9 542 aaKnown RBP13.81□□□□□ -0.2
SCAF1-203ENST00000598359 RFFLQ8WZ73 363 aa13.81□□□□□ -0.2
SCAF1-203ENST00000598359 PDXPQ96GD0 296 aa13.81□□□□□ -0.2
SCAF1-203ENST00000598359 IL12RB2Q99665 862 aa13.81□□□□□ -0.2
SCAF1-203ENST00000598359 MGME1Q9BQP7 344 aa13.81□□□□□ -0.2
SCAF1-203ENST00000598359 DUSP23Q9BVJ7 150 aa13.81□□□□□ -0.2
SCAF1-203ENST00000598359 ABHD10Q9NUJ1 306 aa13.81□□□□□ -0.2
SCAF1-203ENST00000598359 UVRAGQ9P2Y5 699 aa13.81□□□□□ -0.2
SCAF1-203ENST00000598359 PCDHB1Q9Y5F3 818 aa13.81□□□□□ -0.2
SCAF1-203ENST00000598359 AK5Q9Y6K8 562 aa13.81□□□□□ -0.2
SCAF1-203ENST00000598359 MYLKQ15746 1914 aa13.8□□□□□ -0.2
SCAF1-203ENST00000598359 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.8□□□□□ -0.2
SCAF1-203ENST00000598359 TMEM202A6NGA9 273 aa13.8□□□□□ -0.2
SCAF1-203ENST00000598359 YY2O15391 372 aa13.8□□□□□ -0.2
SCAF1-203ENST00000598359 HTRA2O43464 458 aaPredicted RBP13.8□□□□□ -0.2
SCAF1-203ENST00000598359 MFAP3LO75121 409 aa13.8□□□□□ -0.2
SCAF1-203ENST00000598359 TMEM253P0C7T8 217 aa13.8□□□□□ -0.2
SCAF1-203ENST00000598359 CTPS1P17812 591 aa13.8□□□□□ -0.2
SCAF1-203ENST00000598359 HK3P52790 923 aa13.8□□□□□ -0.2
SCAF1-203ENST00000598359 SRP54P61011 504 aaKnown RBP13.8□□□□□ -0.2
SCAF1-203ENST00000598359 POLR2LP62875 67 aaKnown RBP13.8□□□□□ -0.2
SCAF1-203ENST00000598359 E2F1Q01094 437 aa13.8□□□□□ -0.2
SCAF1-203ENST00000598359 GBE1Q04446 702 aa13.8□□□□□ -0.2
SCAF1-203ENST00000598359 ITKQ08881 620 aa13.8□□□□□ -0.2
SCAF1-203ENST00000598359 MTM1Q13496 603 aa13.8□□□□□ -0.2
SCAF1-203ENST00000598359 TRIM14Q14142 442 aa13.8□□□□□ -0.2
SCAF1-203ENST00000598359 IHHQ14623 411 aa13.8□□□□□ -0.2
SCAF1-203ENST00000598359 NFATC4Q14934 902 aa13.8□□□□□ -0.2
SCAF1-203ENST00000598359 AGERQ15109 404 aa13.8□□□□□ -0.2
SCAF1-203ENST00000598359 CNGA3Q16281 694 aa13.8□□□□□ -0.2
SCAF1-203ENST00000598359 PERM1Q5SV97 790 aa13.8□□□□□ -0.2
SCAF1-203ENST00000598359 ZFYVE27Q5T4F4 411 aa13.8□□□□□ -0.2
SCAF1-203ENST00000598359 SLC35F3Q8IY50 421 aa13.8□□□□□ -0.2
SCAF1-203ENST00000598359 C17orf53Q8N3J3 647 aaPredicted RBP13.8□□□□□ -0.2
SCAF1-203ENST00000598359 DCBLD1Q8N8Z6 715 aa13.8□□□□□ -0.2
SCAF1-203ENST00000598359 MAPK15Q8TD08 544 aa13.8□□□□□ -0.2
SCAF1-203ENST00000598359 NSMCE1Q8WV22 266 aa13.8□□□□□ -0.2
SCAF1-203ENST00000598359 OR1E3Q8WZA6 343 aa13.8□□□□□ -0.2
SCAF1-203ENST00000598359 NXPE2Q96DL1 559 aa13.8□□□□□ -0.2
SCAF1-203ENST00000598359 DCBLD2Q96PD2 775 aa13.8□□□□□ -0.2
SCAF1-203ENST00000598359 MRPL40Q9NQ50 206 aaKnown RBP13.8□□□□□ -0.2
SCAF1-203ENST00000598359 ZNHIT6Q9NWK9 470 aaKnown RBP13.8□□□□□ -0.2
SCAF1-203ENST00000598359 SIRPGQ9P1W8 387 aa13.8□□□□□ -0.2
SCAF1-203ENST00000598359 RCOR3Q9P2K3 495 aaPredicted RBP13.8□□□□□ -0.2
SCAF1-203ENST00000598359 DKK4Q9UBT3 224 aa13.8□□□□□ -0.2
SCAF1-203ENST00000598359 KLQ9UEF7 1012 aa13.8□□□□□ -0.2
SCAF1-203ENST00000598359 SSU72P8A0A1W2PR75 194 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 LMO7DNF2Z398 122 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 TOR1BO14657 336 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 TLX3O43711 291 aaPredicted RBP13.79□□□□□ -0.2
SCAF1-203ENST00000598359 ANXA6P08133 673 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 PDHA1P08559 390 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 ALPIP09923 528 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 CTSEP14091 401 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 TGM2P21980 687 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 FECHP22830 423 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 LHCGRP22888 699 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 VIPR1P32241 457 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 HSPA9P38646 679 aaKnown RBP13.79□□□□□ -0.2
SCAF1-203ENST00000598359 GARSP41250 739 aaKnown RBP13.79□□□□□ -0.2
SCAF1-203ENST00000598359 PEX5P50542 639 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 DUSP3P51452 185 aaPredicted RBP13.79□□□□□ -0.2
SCAF1-203ENST00000598359 GALNT2Q10471 571 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 SLC10A2Q12908 348 aaPredicted RBP13.79□□□□□ -0.2
SCAF1-203ENST00000598359 PAFAH1B3Q15102 231 aaKnown RBP13.79□□□□□ -0.2
SCAF1-203ENST00000598359 NR0B2Q15466 257 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 TSR1Q2NL82 804 aaKnown RBP13.79□□□□□ -0.2
SCAF1-203ENST00000598359 HSD11B1LQ7Z5J1 315 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 TSPAN33Q86UF1 283 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 TMEM139Q8IV31 216 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 BBS5Q8N3I7 341 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 PQLC3Q8N755 202 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 SLC35G2Q8TBE7 412 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 RAPGEF5Q92565 580 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 CRELD1Q96HD1 420 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 COQ10AQ96MF6 247 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 WDR92Q96MX6 357 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 SEMA3CQ99985 751 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 BOCQ9BWV1 1114 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 LGR4Q9BXB1 951 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 ABCG4Q9H172 646 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 SUDS3Q9H7L9 328 aaPredicted RBP13.79□□□□□ -0.2
SCAF1-203ENST00000598359 NHEJ1Q9H9Q4 299 aaPredicted RBP13.79□□□□□ -0.2
SCAF1-203ENST00000598359 FGF22Q9HCT0 170 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 GULP1Q9UBP9 304 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 SALL4Q9UJQ4 1053 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 HYOU1Q9Y4L1 999 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 TTLL3Q9Y4R7 772 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 RAI2Q9Y5P3 530 aa13.79□□□□□ -0.2
SCAF1-203ENST00000598359 CFAP69A5D8W1 941 aa13.78□□□□□ -0.2
SCAF1-203ENST00000598359 NPIPB15A6NHN6 443 aaPredicted RBP13.78□□□□□ -0.2
SCAF1-203ENST00000598359 TPP1O14773 563 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms