RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 LINC00303Q3SY05 128 aa10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 PPP1R15BQ5SWA1 713 aa10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 CERCAMQ5T4B2 595 aa10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 ERMARDQ5T6L9 678 aa10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 PHF19Q5T6S3 580 aa10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 SPECC1LQ69YQ0 1117 aa10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 SFTPA2Q8IWL1 248 aa10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 EXD3Q8N9H8 876 aa10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 ZSCAN1Q8NBB4 408 aa10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 CCL4L1Q8NHW4 92 aa10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 EXTL1Q92935 676 aa10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 USP7Q93009 1102 aa10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 TMEM159Q96B96 161 aa10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 SGF29Q96ES7 293 aa10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 CLMPQ9H6B4 373 aa10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 FGF22Q9HCT0 170 aa10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 AKAP7Q9P0M2 348 aaPredicted RBP10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 RNF215Q9Y6U7 377 aa10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 ATMQ13315 3056 aa10.6□□□□□ -0.71
CHMP2A-202ENST00000596708 FLNBO75369 2602 aaKnown RBP10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 PRAMEF33A0A0G2JMD5 474 aa10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 TMCO5BA8MYB1 307 aa10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 PDE2AO00408 941 aaPredicted RBP10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 TNFRSF10CO14798 259 aa10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 PRAMEF10O60809 474 aa10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 RNF8O76064 485 aa10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 WISP1O95388 367 aa10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 HOXC4P09017 264 aaPredicted RBP10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 FERP16591 822 aa10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 TRIM23P36406 574 aa10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 ETV5P41161 510 aa10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 RENBPP51606 427 aa10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 ZFP36L1Q07352 338 aaKnown RBP10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 IL10RBQ08334 325 aa10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 NSUN2Q08J23 767 aaKnown RBP eCLIP10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 BIRC2Q13490 618 aa10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 HLTFQ14527 1009 aaKnown RBP eCLIP10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 RFTN1Q14699 578 aaPredicted RBP10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 CA9Q16790 459 aa10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 TSR1Q2NL82 804 aaKnown RBP10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 AMZ1Q400G9 498 aa10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 MAP9Q49MG5 647 aa10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 PPP6R3Q5H9R7 873 aaPredicted RBP10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 AFMIDQ63HM1 303 aa10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 DENND2CQ68D51 928 aa10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 PNCKQ6P2M8 343 aa10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 ARHGAP36Q6ZRI8 547 aa10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 DPPA4Q7L190 304 aa10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 SPRED1Q7Z699 444 aa10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 PIM3Q86V86 326 aa10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 ZFAND4Q86XD8 727 aa10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 KIAA1524Q8TCG1 905 aa10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 PDCD6IPQ8WUM4 868 aaKnown RBP10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 KCTD15Q96SI1 283 aaPredicted RBP10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 SNRNP25Q9BV90 132 aaKnown RBP10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 LGR4Q9BXB1 951 aa10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 WDR26Q9H7D7 661 aa10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 CARS2Q9HA77 564 aaKnown RBP10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 LIMA1Q9UHB6 759 aaKnown RBP10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 ACSL6Q9UKU0 697 aa10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 PIEZO2Q9H5I5 2752 aa10.59□□□□□ -0.71
CHMP2A-202ENST00000596708 PRSS38A1L453 326 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 TTC24A2A3L6 582 aaPredicted RBP10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 GOLGA6CA6NDK9 693 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 GOLGA6BA6NDN3 693 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 RHPN2P1A8MT19 583 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 LGALS16A8MUM7 142 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 EIF3CLB5ME19 914 aaKnown RBP10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 ZW10O43264 779 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 NUDT21O43809 227 aaKnown RBP10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 GOLGA6DP0CG33 693 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 ALDH4A1P30038 563 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 MAZP56270 477 aaKnown RBP10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 OR1D5P58170 312 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 B4GALNT1Q00973 533 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 LBRQ14739 615 aaKnown RBP10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 TMEM164Q5U3C3 297 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 PPP1R2P3Q6NXS1 205 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 SASS6Q6UVJ0 657 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 XKR5Q6UX68 686 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 RFX8Q6ZV50 586 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 TMPRSS9Q7Z410 1059 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 VASH2Q86V25 355 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 ARHGAP12Q8IWW6 846 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 PELI3Q8N2H9 469 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 ZDHHC1Q8WTX9 485 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 ECHDC3Q96DC8 303 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 NUS1Q96E22 293 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 ERGIC2Q96RQ1 377 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 EIF3CQ99613 913 aaKnown RBP10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 GSDMCQ9BYG8 508 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 SEMA6CQ9H3T2 930 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 RDH14Q9HBH5 336 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 PHPT1Q9NRX4 125 aaPredicted RBP10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 SPATS2LQ9NUQ6 558 aaKnown RBP10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 PARVAQ9NVD7 372 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 GOLGA6AQ9NYA3 693 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 TAS2R14Q9NYV8 317 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 FOXJ2Q9P0K8 574 aa10.58□□□□□ -0.72
CHMP2A-202ENST00000596708 B4GALT6Q9UBX8 382 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms