RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 CCDC92Q53HC0 331 aaPredicted RBP12.07□□□□□ -0.48
ERBB2-206ENST00000578373 PRMT9Q6P2P2 845 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 FAM151BQ6UXP7 276 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 WDTC1Q8N5D0 677 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 UBR7Q8N806 425 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 PNPT1Q8TCS8 783 aaKnown RBP12.07□□□□□ -0.48
ERBB2-206ENST00000578373 GIPC3Q8TF64 312 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 MTERF3Q96E29 417 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 DGKBQ9Y6T7 804 aa12.07□□□□□ -0.48
ERBB2-206ENST00000578373 PMM2O15305 246 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 ARHGEF9O43307 516 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 TBX18O95935 607 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 ALOX15P16050 662 aaPredicted RBP12.06□□□□□ -0.48
ERBB2-206ENST00000578373 ATP5C1P36542 298 aaKnown RBP12.06□□□□□ -0.48
ERBB2-206ENST00000578373 RAP1GDS1P52306 607 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 DUSP4Q13115 394 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 SIM2Q14190 667 aaPredicted RBP12.06□□□□□ -0.48
ERBB2-206ENST00000578373 INSCQ1MX18 579 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 FAM45BPQ6NSW5 357 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 GPRIN3Q6ZVF9 776 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 PLD6Q8N2A8 252 aaKnown RBP12.06□□□□□ -0.48
ERBB2-206ENST00000578373 GPR156Q8NFN8 814 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 FAM45AQ8TCE6 357 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 SSU72Q9NP77 194 aaKnown RBP12.06□□□□□ -0.48
ERBB2-206ENST00000578373 GIMAP2Q9UG22 337 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 CYTH4Q9UIA0 394 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 NPEPPSL1A6NEC2 478 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 CST1P01037 141 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 PRKCGP05129 697 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 HNF4AP41235 474 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 TAF10Q12962 218 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 KCNJ11Q14654 390 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 DUSP28Q4G0W2 176 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 ARMC12Q5T9G4 340 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 CWF19L1Q69YN2 538 aaKnown RBP12.06□□□□□ -0.48
ERBB2-206ENST00000578373 TMEM214Q6NUQ4 689 aaKnown RBP12.06□□□□□ -0.48
ERBB2-206ENST00000578373 NAPRTQ6XQN6 538 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 GALNT5Q7Z7M9 940 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 C19orf60Q96EN9 201 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 MLPHQ9BV36 600 aaPredicted RBP12.06□□□□□ -0.48
ERBB2-206ENST00000578373 CLK4Q9HAZ1 481 aaKnown RBP12.06□□□□□ -0.48
ERBB2-206ENST00000578373 H3BN98 237 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 MFN2O95140 757 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 KRT75O95678 551 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 MMP3P08254 477 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 DLDP09622 509 aaKnown RBP12.06□□□□□ -0.48
ERBB2-206ENST00000578373 TYMPP19971 482 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 ICAM3P32942 547 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 BLVRAP53004 296 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 FCGRTP55899 365 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 BCL2L1Q07817 233 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 ACSM2AQ08AH3 577 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 FGD3Q5JSP0 725 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 ACSM2BQ68CK6 577 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 TYW3Q6IPR3 259 aaKnown RBP12.06□□□□□ -0.48
ERBB2-206ENST00000578373 TRAF7Q6Q0C0 670 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 ABRAXAS1Q6UWZ7 409 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 TRMT11Q7Z4G4 463 aaKnown RBP12.06□□□□□ -0.48
ERBB2-206ENST00000578373 SYT12Q8IV01 421 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 PPTC7Q8NI37 304 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 NAT14Q8WUY8 206 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 GPR21Q99679 349 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 UGT2B28Q9BY64 529 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 LIN28AQ9H9Z2 209 aaKnown RBP12.06□□□□□ -0.48
ERBB2-206ENST00000578373 TXNRD2Q9NNW7 524 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 PCDH12Q9NPG4 1184 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 PNPLA3Q9NST1 481 aa12.06□□□□□ -0.48
ERBB2-206ENST00000578373 LEF1Q9UJU2 399 aaPredicted RBP12.06□□□□□ -0.48
ERBB2-206ENST00000578373 POLR3HQ9Y535 204 aaPredicted RBP12.06□□□□□ -0.48
ERBB2-206ENST00000578373 USP46P62068 366 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 MRPS6P82932 125 aaKnown RBP12.05□□□□□ -0.48
ERBB2-206ENST00000578373 IRF8Q02556 426 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 NCBP2-AS2Q69YL0 99 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 PQLC3Q8N755 202 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 OR7D4Q8NG98 312 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 NACC2Q96BF6 587 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 OSBPL11Q9BXB4 747 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 EPB41L4BQ9H329 900 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 TRIM45Q9H8W5 580 aaPredicted RBP12.05□□□□□ -0.48
ERBB2-206ENST00000578373 ABCB10Q9NRK6 738 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 RASSF1Q9NS23 344 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 STK39Q9UEW8 545 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 SLC2A6Q9UGQ3 507 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 CLCA2Q9UQC9 943 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 CNOT3O75175 753 aaKnown RBP12.05□□□□□ -0.48
ERBB2-206ENST00000578373 RGS20O76081 388 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 DBTP11182 482 aaKnown RBP12.05□□□□□ -0.48
ERBB2-206ENST00000578373 HDCP19113 662 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 SLC5A3P53794 718 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 SFRP1Q8N474 314 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 PSMG2Q969U7 264 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 SLC7A6OSQ96CW6 309 aaPredicted RBP12.05□□□□□ -0.48
ERBB2-206ENST00000578373 SIGLEC10Q96LC7 697 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 GBA3Q9H227 469 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 ARID1BQ8NFD5 2236 aaPredicted RBP12.05□□□□□ -0.48
ERBB2-206ENST00000578373 MYO10Q9HD67 2058 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 A0A1W2PQ67 120 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 SMPD1P17405 629 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 MC4RP32245 332 aa12.05□□□□□ -0.48
ERBB2-206ENST00000578373 GSCP56915 257 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms