RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 RNF214Q8ND24 703 aa17.48■□□□□ 0.39
SMG6-214ENST00000573827 IFI44Q8TCB0 444 aa17.48■□□□□ 0.39
SMG6-214ENST00000573827 PIH1D2Q8WWB5 315 aa17.48■□□□□ 0.39
SMG6-214ENST00000573827 CTNNBL1Q8WYA6 563 aaPredicted RBP17.48■□□□□ 0.39
SMG6-214ENST00000573827 NXPE2Q96DL1 559 aa17.48■□□□□ 0.39
SMG6-214ENST00000573827 PDXPQ96GD0 296 aa17.48■□□□□ 0.39
SMG6-214ENST00000573827 TSGA13Q96PP4 275 aa17.48■□□□□ 0.39
SMG6-214ENST00000573827 SMIM14Q96QK8 99 aa17.48■□□□□ 0.39
SMG6-214ENST00000573827 FGF22Q9HCT0 170 aa17.48■□□□□ 0.39
SMG6-214ENST00000573827 PCDHB1Q9Y5F3 818 aa17.48■□□□□ 0.39
SMG6-214ENST00000573827 DGKBQ9Y6T7 804 aa17.48■□□□□ 0.39
SMG6-214ENST00000573827 A0A1W2PNU3 283 aaPredicted RBP17.47■□□□□ 0.39
SMG6-214ENST00000573827 C3orf70A6NLC5 250 aaPredicted RBP17.47■□□□□ 0.39
SMG6-214ENST00000573827 A8MX80 341 aa17.47■□□□□ 0.39
SMG6-214ENST00000573827 MAP3K6O95382 1288 aa17.47■□□□□ 0.39
SMG6-214ENST00000573827 ELFN1P0C7U0 828 aa17.47■□□□□ 0.39
SMG6-214ENST00000573827 TGM2P21980 687 aa17.47■□□□□ 0.39
SMG6-214ENST00000573827 SRP54P61011 504 aaKnown RBP17.47■□□□□ 0.39
SMG6-214ENST00000573827 TCEAL1Q15170 157 aa17.47■□□□□ 0.39
SMG6-214ENST00000573827 CDKN3Q16667 212 aa17.47■□□□□ 0.39
SMG6-214ENST00000573827 HS1BP3Q53T59 392 aa17.47■□□□□ 0.39
SMG6-214ENST00000573827 PERM1Q5SV97 790 aa17.47■□□□□ 0.39
SMG6-214ENST00000573827 ESRP1Q6NXG1 681 aaKnown RBP17.47■□□□□ 0.39
SMG6-214ENST00000573827 FSTL5Q8N475 847 aaPredicted RBP17.47■□□□□ 0.39
SMG6-214ENST00000573827 SLC35G2Q8TBE7 412 aa17.47■□□□□ 0.39
SMG6-214ENST00000573827 ARRDC2Q8TBH0 407 aa17.47■□□□□ 0.39
SMG6-214ENST00000573827 LRRN4Q8WUT4 740 aa17.47■□□□□ 0.39
SMG6-214ENST00000573827 OR1E3Q8WZA6 343 aa17.47■□□□□ 0.39
SMG6-214ENST00000573827 IL12RB2Q99665 862 aa17.47■□□□□ 0.39
SMG6-214ENST00000573827 LGR4Q9BXB1 951 aa17.47■□□□□ 0.39
SMG6-214ENST00000573827 SLC13A1Q9BZW2 595 aa17.47■□□□□ 0.39
SMG6-214ENST00000573827 SCUBE2Q9NQ36 999 aa17.47■□□□□ 0.39
SMG6-214ENST00000573827 SPTLC3Q9NUV7 552 aa17.47■□□□□ 0.39
SMG6-214ENST00000573827 ARHGEF17Q96PE2 2063 aaPredicted RBP17.47■□□□□ 0.39
SMG6-214ENST00000573827 A0A1W2PQ67 120 aa17.46■□□□□ 0.39
SMG6-214ENST00000573827 NPIPB15A6NHN6 443 aaPredicted RBP17.46■□□□□ 0.39
SMG6-214ENST00000573827 MATN3O15232 486 aa17.46■□□□□ 0.39
SMG6-214ENST00000573827 CPP00450 1065 aa17.46■□□□□ 0.39
SMG6-214ENST00000573827 PRLP01236 227 aa17.46■□□□□ 0.39
SMG6-214ENST00000573827 PDHA1P08559 390 aa17.46■□□□□ 0.39
SMG6-214ENST00000573827 KRT7P08729 469 aa17.46■□□□□ 0.39
SMG6-214ENST00000573827 VIPR1P32241 457 aa17.46■□□□□ 0.39
SMG6-214ENST00000573827 GJC1P36383 396 aa17.46■□□□□ 0.39
SMG6-214ENST00000573827 SSR1P43307 286 aaKnown RBP17.46■□□□□ 0.39
SMG6-214ENST00000573827 DUSP3P51452 185 aaPredicted RBP17.46■□□□□ 0.39
SMG6-214ENST00000573827 KIF26BQ2KJY2 2108 aa17.46■□□□□ 0.39
SMG6-214ENST00000573827 FAXCQ5TGI0 409 aa17.46■□□□□ 0.39
SMG6-214ENST00000573827 ENPP7Q6UWV6 458 aa17.46■□□□□ 0.39
SMG6-214ENST00000573827 EFL1Q7Z2Z2 1120 aaKnown RBP17.46■□□□□ 0.39
SMG6-214ENST00000573827 HSD11B1LQ7Z5J1 315 aa17.46■□□□□ 0.39
SMG6-214ENST00000573827 TSPAN33Q86UF1 283 aa17.46■□□□□ 0.39
SMG6-214ENST00000573827 HID1Q8IV36 788 aa17.46■□□□□ 0.39
SMG6-214ENST00000573827 PLD5Q8N7P1 536 aa17.46■□□□□ 0.39
SMG6-214ENST00000573827 KCTD6Q8NC69 237 aa17.46■□□□□ 0.39
SMG6-214ENST00000573827 SCRN2Q96FV2 425 aa17.46■□□□□ 0.39
SMG6-214ENST00000573827 WDR92Q96MX6 357 aa17.46■□□□□ 0.39
SMG6-214ENST00000573827 RBM15Q96T37 977 aaKnown RBP eCLIP17.46■□□□□ 0.39
SMG6-214ENST00000573827 SEMA3CQ99985 751 aa17.46■□□□□ 0.39
SMG6-214ENST00000573827 NHEJ1Q9H9Q4 299 aaPredicted RBP17.46■□□□□ 0.39
SMG6-214ENST00000573827 NT5MQ9NPB1 228 aa17.46■□□□□ 0.39
SMG6-214ENST00000573827 DTLQ9NZJ0 730 aa17.46■□□□□ 0.39
SMG6-214ENST00000573827 NCKIPSDQ9NZQ3 722 aa17.46■□□□□ 0.39
SMG6-214ENST00000573827 LCMT1Q9UIC8 334 aa17.46■□□□□ 0.39
SMG6-214ENST00000573827 PHTF1Q9UMS5 762 aa17.46■□□□□ 0.39
SMG6-214ENST00000573827 A0A0U1RQS6 177 aa17.45■□□□□ 0.38
SMG6-214ENST00000573827 AKR1B10O60218 316 aa17.45■□□□□ 0.38
SMG6-214ENST00000573827 RASGRP1O95267 797 aa17.45■□□□□ 0.38
SMG6-214ENST00000573827 FUCA1P04066 466 aa17.45■□□□□ 0.38
SMG6-214ENST00000573827 KDELR1P24390 212 aa17.45■□□□□ 0.38
SMG6-214ENST00000573827 BLKP51451 505 aa17.45■□□□□ 0.38
SMG6-214ENST00000573827 PDX1P52945 283 aa17.45■□□□□ 0.38
SMG6-214ENST00000573827 NIPAL4Q0D2K0 466 aa17.45■□□□□ 0.38
SMG6-214ENST00000573827 NR0B2Q15466 257 aa17.45■□□□□ 0.38
SMG6-214ENST00000573827 PNCKQ6P2M8 343 aa17.45■□□□□ 0.38
SMG6-214ENST00000573827 LVRNQ6Q4G3 990 aa17.45■□□□□ 0.38
SMG6-214ENST00000573827 C19orf48Q6RUI8 117 aa17.45■□□□□ 0.38
SMG6-214ENST00000573827 SARM1Q6SZW1 724 aa17.45■□□□□ 0.38
SMG6-214ENST00000573827 RFLNAQ6ZTI6 216 aa17.45■□□□□ 0.38
SMG6-214ENST00000573827 TECPR1Q7Z6L1 1165 aa17.45■□□□□ 0.38
SMG6-214ENST00000573827 DTD2Q96FN9 168 aa17.45■□□□□ 0.38
SMG6-214ENST00000573827 RNF157Q96PX1 679 aa17.45■□□□□ 0.38
SMG6-214ENST00000573827 KLQ9UEF7 1012 aa17.45■□□□□ 0.38
SMG6-214ENST00000573827 LHX6Q9UPM6 363 aa17.45■□□□□ 0.38
SMG6-214ENST00000573827 RAI2Q9Y5P3 530 aa17.45■□□□□ 0.38
SMG6-214ENST00000573827 CPED1A4D0V7 1026 aa17.44■□□□□ 0.38
SMG6-214ENST00000573827 ZNF487B1APH4 448 aa17.44■□□□□ 0.38
SMG6-214ENST00000573827 TNFRSF10CO14798 259 aa17.44■□□□□ 0.38
SMG6-214ENST00000573827 BRINP1O60477 761 aa17.44■□□□□ 0.38
SMG6-214ENST00000573827 SOD1P00441 154 aa17.44■□□□□ 0.38
SMG6-214ENST00000573827 ANXA6P08133 673 aa17.44■□□□□ 0.38
SMG6-214ENST00000573827 CCNCP24863 283 aa17.44■□□□□ 0.38
SMG6-214ENST00000573827 HTR1BP28222 390 aa17.44■□□□□ 0.38
SMG6-214ENST00000573827 ETV3P41162 512 aa17.44■□□□□ 0.38
SMG6-214ENST00000573827 DSC2Q02487 901 aa17.44■□□□□ 0.38
SMG6-214ENST00000573827 MESDQ14696 234 aa17.44■□□□□ 0.38
SMG6-214ENST00000573827 ACOX1Q15067 660 aa17.44■□□□□ 0.38
SMG6-214ENST00000573827 ELOCQ15369 112 aa17.44■□□□□ 0.38
SMG6-214ENST00000573827 IFI16Q16666 785 aaKnown RBP17.44■□□□□ 0.38
SMG6-214ENST00000573827 VSIG1Q86XK7 387 aa17.44■□□□□ 0.38
SMG6-214ENST00000573827 BBS5Q8N3I7 341 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms