RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 C16orf72Q14CZ0 275 aa10.79□□□□□ -0.68
CCDC40-207ENST00000572253 EML3Q32P44 896 aa10.79□□□□□ -0.68
CCDC40-207ENST00000572253 UBXN11Q5T124 520 aa10.79□□□□□ -0.68
CCDC40-207ENST00000572253 TMTC4Q5T4D3 741 aa10.79□□□□□ -0.68
CCDC40-207ENST00000572253 RANBP10Q6VN20 620 aa10.79□□□□□ -0.68
CCDC40-207ENST00000572253 LARP4Q71RC2 724 aaKnown RBP eCLIP10.79□□□□□ -0.68
CCDC40-207ENST00000572253 RPS27LQ71UM5 84 aaKnown RBP10.79□□□□□ -0.68
CCDC40-207ENST00000572253 CTU1Q7Z7A3 348 aaKnown RBP10.79□□□□□ -0.68
CCDC40-207ENST00000572253 PATL1Q86TB9 770 aaKnown RBP10.79□□□□□ -0.68
CCDC40-207ENST00000572253 RYBPQ8N488 228 aaPredicted RBP10.79□□□□□ -0.68
CCDC40-207ENST00000572253 SEPT8Q92599 483 aa10.79□□□□□ -0.68
CCDC40-207ENST00000572253 SLC39A8Q9C0K1 460 aa10.79□□□□□ -0.68
CCDC40-207ENST00000572253 GSTO2Q9H4Y5 243 aa10.79□□□□□ -0.68
CCDC40-207ENST00000572253 CD320Q9NPF0 282 aa10.79□□□□□ -0.68
CCDC40-207ENST00000572253 TLL2Q9Y6L7 1015 aa10.79□□□□□ -0.68
CCDC40-207ENST00000572253 ZNF638Q14966 1978 aaKnown RBP10.78□□□□□ -0.68
CCDC40-207ENST00000572253 MAFKO60675 156 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 C7P10643 843 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 HOXD8P13378 290 aaPredicted RBP10.78□□□□□ -0.68
CCDC40-207ENST00000572253 TSPAN8P19075 237 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 EMP3P54852 163 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 SPATS1Q496A3 300 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 KIAA0319Q5VV43 1072 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 IQSEC1Q6DN90 963 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 KLHL35Q6PF15 583 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 METTL23Q86XA0 190 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 SPPL2CQ8IUH8 684 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 ARHGAP12Q8IWW6 846 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 DPF3Q92784 378 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 ISOC1Q96CN7 298 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 L3HYPDHQ96EM0 354 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 FEM1CQ96JP0 617 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 PHF12Q96QT6 1004 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 MUC13Q9H3R2 512 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 TBCCD1Q9NVR7 557 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 DUS2Q9NX74 493 aaKnown RBP10.78□□□□□ -0.68
CCDC40-207ENST00000572253 PKD2L2Q9NZM6 624 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 PLOD2O00469 737 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 DYNC1LI2O43237 492 aaPredicted RBP10.78□□□□□ -0.68
CCDC40-207ENST00000572253 CLASP2O75122 1294 aaKnown RBP10.78□□□□□ -0.68
CCDC40-207ENST00000572253 GPIP06744 558 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 IMPDH2P12268 514 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 HOXB8P17481 243 aaPredicted RBP10.78□□□□□ -0.68
CCDC40-207ENST00000572253 CCR1P32246 355 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 ZNF678Q5SXM1 525 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 ABRAXAS1Q6UWZ7 409 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 DHRSXQ8N5I4 330 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 SNRNP27Q8WVK2 155 aaKnown RBP10.78□□□□□ -0.68
CCDC40-207ENST00000572253 MRGPRX2Q96LB1 330 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 ABHD16BQ9H3Z7 469 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 AKTIPQ9H8T0 292 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 FBRSL1Q9HCM7 1045 aaKnown RBP10.78□□□□□ -0.68
CCDC40-207ENST00000572253 SMOXQ9NWM0 555 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 ACTR3BQ9P1U1 418 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 GOLGB1Q14789 3259 aaKnown RBP10.78□□□□□ -0.68
CCDC40-207ENST00000572253 AURKAO14965 403 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 AZIN1O14977 448 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 SLC7A4O43246 635 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 SNAI1O95863 264 aaPredicted RBP10.78□□□□□ -0.68
CCDC40-207ENST00000572253 HSD17B1P14061 328 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 LBPP18428 481 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 HERVK_113P63132 956 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 DHRS4L2Q6PKH6 230 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 RBM12BQ8IXT5 1001 aaKnown RBP10.78□□□□□ -0.68
CCDC40-207ENST00000572253 LRRC43Q8N309 656 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 BBS5Q8N3I7 341 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 MYLPFQ96A32 169 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 TUBGCP3Q96CW5 907 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 DCUN1D5Q9BTE7 237 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 ERVK-6Q9BXR3 956 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 SLC25A51Q9H1U9 297 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 HIPK3Q9H422 1215 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 MID1IP1Q9NPA3 183 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 RGS18Q9NS28 235 aa10.78□□□□□ -0.68
CCDC40-207ENST00000572253 ADARB2Q9NS39 739 aaKnown RBP10.78□□□□□ -0.68
CCDC40-207ENST00000572253 VPS4BO75351 444 aa10.77□□□□□ -0.68
CCDC40-207ENST00000572253 PAGE1O75459 146 aa10.77□□□□□ -0.68
CCDC40-207ENST00000572253 SLC4A1P02730 911 aa10.77□□□□□ -0.68
CCDC40-207ENST00000572253 ARSAP15289 507 aa10.77□□□□□ -0.68
CCDC40-207ENST00000572253 GPX3P22352 226 aa10.77□□□□□ -0.68
CCDC40-207ENST00000572253 SCNN1BP51168 640 aa10.77□□□□□ -0.68
CCDC40-207ENST00000572253 AASDHQ4L235 1098 aaPredicted RBP10.77□□□□□ -0.68
CCDC40-207ENST00000572253 GPR158Q5T848 1215 aa10.77□□□□□ -0.68
CCDC40-207ENST00000572253 C8orf82Q6P1X6 216 aaPredicted RBP10.77□□□□□ -0.68
CCDC40-207ENST00000572253 MOB2Q70IA6 237 aa10.77□□□□□ -0.68
CCDC40-207ENST00000572253 ZNF354CQ86Y25 554 aa10.77□□□□□ -0.68
CCDC40-207ENST00000572253 MINDY1Q8N5J2 469 aa10.77□□□□□ -0.68
CCDC40-207ENST00000572253 ARRDC4Q8NCT1 418 aa10.77□□□□□ -0.68
CCDC40-207ENST00000572253 SMG8Q8ND04 991 aaKnown RBP10.77□□□□□ -0.68
CCDC40-207ENST00000572253 GRIN3AQ8TCU5 1115 aa10.77□□□□□ -0.68
CCDC40-207ENST00000572253 C12orf43Q96C57 262 aaKnown RBP10.77□□□□□ -0.68
CCDC40-207ENST00000572253 UBXN10Q96LJ8 280 aa10.77□□□□□ -0.68
CCDC40-207ENST00000572253 TNFRSF12AQ9NP84 129 aa10.77□□□□□ -0.68
CCDC40-207ENST00000572253 PFDN4Q9NQP4 134 aa10.77□□□□□ -0.68
CCDC40-207ENST00000572253 EGFL7Q9UHF1 273 aa10.77□□□□□ -0.68
CCDC40-207ENST00000572253 SH3PXD2BA1X283 911 aa10.77□□□□□ -0.69
CCDC40-207ENST00000572253 NME4O00746 187 aa10.77□□□□□ -0.69
CCDC40-207ENST00000572253 SNAP91O60641 907 aa10.77□□□□□ -0.69
CCDC40-207ENST00000572253 CRYBB1P53674 252 aaPredicted RBP10.77□□□□□ -0.69
CCDC40-207ENST00000572253 FOXM1Q08050 763 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms