RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	MTM1	Q13496	603 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	C1orf61	Q13536	156 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	NFATC4	Q14934	902 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	ACOX1	Q15067	660 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	ELOC	Q15369	112 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	CDKN3	Q16667	212 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	DEFB133	Q30KQ1	61 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	PRRT3	Q5FWE3	981 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	ZFYVE27	Q5T4F4	411 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	ARMC12	Q5T9G4	340 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	NCBP2-AS2	Q69YL0	99 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	TIGD7	Q6NT04	549 aa	Predicted RBP	6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	PNCK	Q6P2M8	343 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	LVRN	Q6Q4G3	990 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	ENPP7	Q6UWV6	458 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	RD3	Q7Z3Z2	195 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	HID1	Q8IV36	788 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	CNGA4	Q8IV77	575 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	RHOT2	Q8IXI1	618 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	RBFA	Q8N0V3	343 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	NDUFAF2	Q8N183	169 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	CBARP	Q8N350	705 aa	Predicted RBP	6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	FSTL5	Q8N475	847 aa	Predicted RBP	6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	DCBLD1	Q8N8Z6	715 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	PLA2G15	Q8NCC3	412 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	CCNY	Q8ND76	341 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	TPCN2	Q8NHX9	752 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	MDM1	Q8TC05	714 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	RFFL	Q8WZ73	363 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	RAPGEF5	Q92565	580 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	FATE1	Q969F0	183 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	TSACC	Q96A04	125 aa	Predicted RBP	6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	FAF2	Q96CS3	445 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	SCRN2	Q96FV2	425 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	COQ10A	Q96MF6	247 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	RNF157	Q96PX1	679 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	SEMA3C	Q99985	751 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	ZNF670	Q9BS34	389 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	MAK16	Q9BXY0	300 aa	Known RBP	6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	TRIM5	Q9C035	493 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	NRSN2	Q9GZP1	204 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	TCEAL2	Q9H3H9	227 aa	Predicted RBP	6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	SPTLC3	Q9NUV7	552 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	HAUS2	Q9NVX0	235 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	RBM22	Q9NW64	420 aa	Known RBP eCLIP	6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	KCTD5	Q9NXV2	234 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	B4GALT6	Q9UBX8	382 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	APOBEC3B	Q9UH17	382 aa	Known RBP	6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	AMACR	Q9UHK6	382 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	INTU	Q9ULD6	942 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	PNMA8B	Q9ULN7	279 aa	Predicted RBP	6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	PHTF1	Q9UMS5	762 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	CLCA2	Q9UQC9	943 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	OR1A2	Q9Y585	309 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	AK5	Q9Y6K8	562 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635		U3KQA8	63 aa		6.94	□□□□□ -1.3
SF3B3-209	ENST00000567635	AHCTF1	Q8WYP5	2266 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	LRRD1	A4D1F6	860 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	ZNF487	B1APH4	448 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	CACNB4	O00305	520 aa	Predicted RBP	6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	PDE2A	O00408	941 aa	Predicted RBP	6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	TNFRSF10C	O14798	259 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	MFSD11	O43934	449 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	MTA2	O94776	668 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	PGLS	O95336	258 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	CP	P00450	1065 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	CYP2A6	P11509	494 aa	Predicted RBP	6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	TSHR	P16473	764 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	MX2	P20592	715 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	KEL	P23276	732 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	VIPR1	P32241	457 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	KIAA1024L	P59773	190 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	MAX	P61244	160 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	SLC10A2	Q12908	348 aa	Predicted RBP	6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	TRAF2	Q12933	501 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	ARHGEF7	Q14155	803 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	RTP5	Q14D33	572 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	TCEAL1	Q15170	157 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	NR0B2	Q15466	257 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	ALG11	Q2TAA5	492 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	ODF2	Q5BJF6	829 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	LRRC38	Q5VT99	294 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	CDCP2	Q5VXM1	449 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	DENND2C	Q68D51	928 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	ESRP1	Q6NXG1	681 aa	Known RBP	6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	SARM1	Q6SZW1	724 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	GKN2	Q86XP6	184 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	PQLC3	Q8N755	202 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	OR56A4	Q8NGH8	313 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	IFI44	Q8TCB0	444 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	MAPK15	Q8TD08	544 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	PIH1D2	Q8WWB5	315 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	MAML1	Q92585	1016 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	NXPE2	Q96DL1	559 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	WDR92	Q96MX6	357 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	LRRC61	Q9BV99	259 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	BOC	Q9BWV1	1114 aa		6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	POLR1E	Q9GZS1	481 aa	Known RBP	6.93	□□□□□ -1.3
SF3B3-209	ENST00000567635	CLPB	Q9H078	707 aa		6.93	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms