RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 MESP2Q0VG99 397 aa6.26□□□□□ -1.41
CHD9-217ENST00000565832 ZNF460Q14592 562 aa6.26□□□□□ -1.41
CHD9-217ENST00000565832 ARSJQ5FYB0 599 aaPredicted RBP6.26□□□□□ -1.41
CHD9-217ENST00000565832 PRSS36Q5K4E3 855 aa6.26□□□□□ -1.41
CHD9-217ENST00000565832 ACBD5Q5T8D3 534 aaPredicted RBP6.26□□□□□ -1.41
CHD9-217ENST00000565832 FYB2Q5VWT5 728 aa6.26□□□□□ -1.41
CHD9-217ENST00000565832 MARK2Q7KZI7 788 aaKnown RBP6.26□□□□□ -1.41
CHD9-217ENST00000565832 CAMK1DQ8IU85 385 aa6.26□□□□□ -1.41
CHD9-217ENST00000565832 FAM217AQ8IXS0 508 aa6.26□□□□□ -1.41
CHD9-217ENST00000565832 DCLK2Q8N568 766 aa6.26□□□□□ -1.41
CHD9-217ENST00000565832 HJURPQ8NCD3 748 aaPredicted RBP6.26□□□□□ -1.41
CHD9-217ENST00000565832 MDGA1Q8NFP4 955 aa6.26□□□□□ -1.41
CHD9-217ENST00000565832 OR13C4Q8NGS5 318 aa6.26□□□□□ -1.41
CHD9-217ENST00000565832 NAT14Q8WUY8 206 aa6.26□□□□□ -1.41
CHD9-217ENST00000565832 SORCS1Q8WY21 1168 aa6.26□□□□□ -1.41
CHD9-217ENST00000565832 CDKL2Q92772 493 aa6.26□□□□□ -1.41
CHD9-217ENST00000565832 FATE1Q969F0 183 aa6.26□□□□□ -1.41
CHD9-217ENST00000565832 HDAC10Q969S8 669 aa6.26□□□□□ -1.41
CHD9-217ENST00000565832 ALKBH8Q96BT7 664 aaKnown RBP6.26□□□□□ -1.41
CHD9-217ENST00000565832 RMDN1Q96DB5 314 aa6.26□□□□□ -1.41
CHD9-217ENST00000565832 RSPRY1Q96DX4 576 aa6.26□□□□□ -1.41
CHD9-217ENST00000565832 GCNAQ96QF7 691 aa6.26□□□□□ -1.41
CHD9-217ENST00000565832 MGME1Q9BQP7 344 aa6.26□□□□□ -1.41
CHD9-217ENST00000565832 MTIF3Q9H2K0 278 aaKnown RBP6.26□□□□□ -1.41
CHD9-217ENST00000565832 PPCSQ9HAB8 311 aa6.26□□□□□ -1.41
CHD9-217ENST00000565832 ARNT2Q9HBZ2 717 aa6.26□□□□□ -1.41
CHD9-217ENST00000565832 ACSS2Q9NR19 701 aa6.26□□□□□ -1.41
CHD9-217ENST00000565832 TREX1Q9NSU2 369 aa6.26□□□□□ -1.41
CHD9-217ENST00000565832 SLCO3A1Q9UIG8 710 aa6.26□□□□□ -1.41
CHD9-217ENST00000565832 ARHGAP26Q9UNA1 814 aa6.26□□□□□ -1.41
CHD9-217ENST00000565832 TCAF1Q9Y4C2 921 aa6.26□□□□□ -1.41
CHD9-217ENST00000565832 C2orf16Q68DN1 1984 aa6.26□□□□□ -1.41
CHD9-217ENST00000565832 F5P12259 2224 aa6.26□□□□□ -1.41
CHD9-217ENST00000565832 COPEO14579 308 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 LINC01565O15544 149 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 ZNF821O75541 412 aaPredicted RBP6.25□□□□□ -1.41
CHD9-217ENST00000565832 KRT38O76015 456 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 AVPP01185 164 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 RB1P06400 928 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 TYK2P29597 1187 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 IDH3AP50213 366 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 EPHA5P54756 1037 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 ERVK-21P61565 698 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 UBE3AQ05086 875 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 TNK2Q07912 1038 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 MTA1Q13330 715 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 GRM3Q14832 879 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 DGKKQ5KSL6 1271 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 LY6G5CQ5SRR4 150 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 LGSNQ5TDP6 509 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 HHATQ5VTY9 493 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 TMEM215Q68D42 235 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 CGB2Q6NT52 195 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 CNSTQ6PJW8 725 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 TRIM46Q7Z4K8 759 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 PPHLN1Q8NEY8 458 aaKnown RBP6.25□□□□□ -1.41
CHD9-217ENST00000565832 OR6P1Q8NGX9 317 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 FAM136AQ96C01 138 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 ERLEC1Q96DZ1 483 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 SEC16BQ96JE7 1060 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 TBATAQ96M53 351 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 FAM161BQ96MY7 647 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 TRIB3Q96RU7 358 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 NDNQ99608 321 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 DDX50Q9BQ39 737 aaKnown RBP6.25□□□□□ -1.41
CHD9-217ENST00000565832 MCMBPQ9BTE3 642 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 VPS11Q9H270 941 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 TASP1Q9H6P5 420 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 PIDD1Q9HB75 910 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 BPIFA1Q9NP55 256 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 TIMMDC1Q9NPL8 285 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 FBXO6Q9NRD1 293 aaPredicted RBP6.25□□□□□ -1.41
CHD9-217ENST00000565832 VPS45Q9NRW7 570 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 MARCH4Q9P2E8 410 aaPredicted RBP6.25□□□□□ -1.41
CHD9-217ENST00000565832 TXNDC16Q9P2K2 825 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 LSM7Q9UK45 103 aaKnown RBP6.25□□□□□ -1.41
CHD9-217ENST00000565832 SLC39A10Q9ULF5 831 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 SMG5Q9UPR3 1016 aaKnown RBP6.25□□□□□ -1.41
CHD9-217ENST00000565832 PLLPQ9Y342 182 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 MRPS23Q9Y3D9 190 aaKnown RBP6.25□□□□□ -1.41
CHD9-217ENST00000565832 RAI2Q9Y5P3 530 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 LAMA1P25391 3075 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 MROH6A6NGR9 719 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 A6NNZ2 444 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 PHGDHO43175 533 aaKnown RBP6.25□□□□□ -1.41
CHD9-217ENST00000565832 GPR39O43194 453 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 PIGNO95427 931 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 GSRP00390 522 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 ALPIP09923 528 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 PCSK2P16519 638 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 CTPS1P17812 591 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 MSX1P28360 303 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 GP5P40197 560 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 SLC1A2P43004 574 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 CDKN1CP49918 316 aaPredicted RBP6.25□□□□□ -1.41
CHD9-217ENST00000565832 IL9RQ01113 521 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 OVGP1Q12889 678 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 TRAF2Q12933 501 aa6.25□□□□□ -1.41
CHD9-217ENST00000565832 SEPT7Q16181 437 aaKnown RBP6.25□□□□□ -1.41
CHD9-217ENST00000565832 TUBB8Q3ZCM7 444 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms