RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 PPP2R5EQ16537 467 aa19.91■□□□□ 0.78
CMTM3-207ENST00000564060 ZNF542PQ5EBM4 170 aa19.91■□□□□ 0.78
CMTM3-207ENST00000564060 KAZNQ674X7 775 aa19.91■□□□□ 0.78
CMTM3-207ENST00000564060 ACRBPQ8NEB7 543 aa19.91■□□□□ 0.78
CMTM3-207ENST00000564060 ZNF548Q8NEK5 533 aaPredicted RBP19.91■□□□□ 0.78
CMTM3-207ENST00000564060 NUS1Q96E22 293 aa19.91■□□□□ 0.78
CMTM3-207ENST00000564060 CNTNAP3BQ96NU0 1288 aa19.91■□□□□ 0.78
CMTM3-207ENST00000564060 APOOQ9BUR5 198 aa19.91■□□□□ 0.78
CMTM3-207ENST00000564060 TDRD1Q9BXT4 1180 aaKnown RBP19.91■□□□□ 0.78
CMTM3-207ENST00000564060 CNTNAP3Q9BZ76 1288 aa19.91■□□□□ 0.78
CMTM3-207ENST00000564060 APOBEC3BQ9UH17 382 aaKnown RBP19.91■□□□□ 0.78
CMTM3-207ENST00000564060 GOLGA4Q13439 2230 aaKnown RBP19.9■□□□□ 0.78
CMTM3-207ENST00000564060 CCDC66A2RUB6 948 aa19.9■□□□□ 0.78
CMTM3-207ENST00000564060 FAM221BA6H8Z2 402 aa19.9■□□□□ 0.78
CMTM3-207ENST00000564060 A8MX80 341 aa19.9■□□□□ 0.78
CMTM3-207ENST00000564060 CACNB4O00305 520 aaPredicted RBP19.9■□□□□ 0.78
CMTM3-207ENST00000564060 MTSS1O43312 755 aa19.9■□□□□ 0.78
CMTM3-207ENST00000564060 AQP9O43315 295 aa19.9■□□□□ 0.78
CMTM3-207ENST00000564060 TOP3BO95985 862 aaKnown RBP19.9■□□□□ 0.78
CMTM3-207ENST00000564060 ZNF30P17039 623 aa19.9■□□□□ 0.78
CMTM3-207ENST00000564060 SPINK2P20155 84 aa19.9■□□□□ 0.78
CMTM3-207ENST00000564060 CTNNA1P35221 906 aaKnown RBP19.9■□□□□ 0.78
CMTM3-207ENST00000564060 CETN2P41208 172 aa19.9■□□□□ 0.78
CMTM3-207ENST00000564060 DAB2P98082 770 aa19.9■□□□□ 0.78
CMTM3-207ENST00000564060 PPARDQ03181 441 aa19.9■□□□□ 0.78
CMTM3-207ENST00000564060 KIF5AQ12840 1032 aa19.9■□□□□ 0.78
CMTM3-207ENST00000564060 ESRP1Q6NXG1 681 aaKnown RBP19.9■□□□□ 0.78
CMTM3-207ENST00000564060 PHACTR4Q8IZ21 702 aa19.9■□□□□ 0.78
CMTM3-207ENST00000564060 ARRDC2Q8TBH0 407 aa19.9■□□□□ 0.78
CMTM3-207ENST00000564060 KIAA1524Q8TCG1 905 aa19.9■□□□□ 0.78
CMTM3-207ENST00000564060 PIH1D2Q8WWB5 315 aa19.9■□□□□ 0.78
CMTM3-207ENST00000564060 P3H4Q92791 437 aa19.9■□□□□ 0.78
CMTM3-207ENST00000564060 WDR92Q96MX6 357 aa19.9■□□□□ 0.78
CMTM3-207ENST00000564060 USP29Q9HBJ7 922 aa19.9■□□□□ 0.78
CMTM3-207ENST00000564060 UCKL1Q9NWZ5 548 aa19.9■□□□□ 0.78
CMTM3-207ENST00000564060 NCKIPSDQ9NZQ3 722 aa19.9■□□□□ 0.78
CMTM3-207ENST00000564060 KLK13Q9UKR3 277 aa19.9■□□□□ 0.78
CMTM3-207ENST00000564060 REXO2Q9Y3B8 237 aaKnown RBP19.9■□□□□ 0.78
CMTM3-207ENST00000564060 PLXNB3Q9ULL4 1909 aa19.9■□□□□ 0.78
CMTM3-207ENST00000564060 hCG_1818297A0A087WSY0 165 aa19.89■□□□□ 0.77
CMTM3-207ENST00000564060 A0A0J9YYE9 177 aa19.89■□□□□ 0.77
CMTM3-207ENST00000564060 RCCD1A6NED2 376 aa19.89■□□□□ 0.77
CMTM3-207ENST00000564060 NPIPB15A6NHN6 443 aaPredicted RBP19.89■□□□□ 0.77
CMTM3-207ENST00000564060 PDE2AO00408 941 aaPredicted RBP19.89■□□□□ 0.77
CMTM3-207ENST00000564060 FFAR2O15552 330 aa19.89■□□□□ 0.77
CMTM3-207ENST00000564060 SIGLEC6O43699 453 aa19.89■□□□□ 0.77
CMTM3-207ENST00000564060 TRBC1P01850 177 aa19.89■□□□□ 0.77
CMTM3-207ENST00000564060 TSHRP16473 764 aa19.89■□□□□ 0.77
CMTM3-207ENST00000564060 ACADVLP49748 655 aa19.89■□□□□ 0.77
CMTM3-207ENST00000564060 ZBTB17Q13105 803 aa19.89■□□□□ 0.77
CMTM3-207ENST00000564060 PROX2Q3B8N5 592 aa19.89■□□□□ 0.77
CMTM3-207ENST00000564060 CCDC157Q569K6 752 aa19.89■□□□□ 0.77
CMTM3-207ENST00000564060 TPRG1LQ5T0D9 272 aa19.89■□□□□ 0.77
CMTM3-207ENST00000564060 FAXCQ5TGI0 409 aa19.89■□□□□ 0.77
CMTM3-207ENST00000564060 NPNTQ6UXI9 565 aa19.89■□□□□ 0.77
CMTM3-207ENST00000564060 TMEM139Q8IV31 216 aa19.89■□□□□ 0.77
CMTM3-207ENST00000564060 RAVER1Q8IY67 606 aaKnown RBP19.89■□□□□ 0.77
CMTM3-207ENST00000564060 SYCE1Q8N0S2 351 aa19.89■□□□□ 0.77
CMTM3-207ENST00000564060 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.89■□□□□ 0.77
CMTM3-207ENST00000564060 LRRN4Q8WUT4 740 aa19.89■□□□□ 0.77
CMTM3-207ENST00000564060 TFB1MQ8WVM0 346 aaKnown RBP19.89■□□□□ 0.77
CMTM3-207ENST00000564060 COQ10AQ96MF6 247 aa19.89■□□□□ 0.77
CMTM3-207ENST00000564060 ADGRE3Q9BY15 652 aa19.89■□□□□ 0.77
CMTM3-207ENST00000564060 PCDH9Q9HC56 1237 aa19.89■□□□□ 0.77
CMTM3-207ENST00000564060 SEPT10Q9P0V9 454 aa19.89■□□□□ 0.77
CMTM3-207ENST00000564060 SALL4Q9UJQ4 1053 aa19.89■□□□□ 0.77
CMTM3-207ENST00000564060 TRIM38O00635 465 aa19.88■□□□□ 0.77
CMTM3-207ENST00000564060 TPP1O14773 563 aa19.88■□□□□ 0.77
CMTM3-207ENST00000564060 RASGRP1O95267 797 aa19.88■□□□□ 0.77
CMTM3-207ENST00000564060 PDHA1P08559 390 aa19.88■□□□□ 0.77
CMTM3-207ENST00000564060 HOXC4P09017 264 aaPredicted RBP19.88■□□□□ 0.77
CMTM3-207ENST00000564060 CTPS1P17812 591 aa19.88■□□□□ 0.77
CMTM3-207ENST00000564060 ACP1P24666 158 aa19.88■□□□□ 0.77
CMTM3-207ENST00000564060 DUSP3P51452 185 aaPredicted RBP19.88■□□□□ 0.77
CMTM3-207ENST00000564060 KIAA1024LP59773 190 aa19.88■□□□□ 0.77
CMTM3-207ENST00000564060 DNAJC3Q13217 504 aa19.88■□□□□ 0.77
CMTM3-207ENST00000564060 SLC14A2Q15849 920 aa19.88■□□□□ 0.77
CMTM3-207ENST00000564060 DENND2CQ68D51 928 aa19.88■□□□□ 0.77
CMTM3-207ENST00000564060 ZCCHC8Q6NZY4 707 aaKnown RBP19.88■□□□□ 0.77
CMTM3-207ENST00000564060 ENPP7Q6UWV6 458 aa19.88■□□□□ 0.77
CMTM3-207ENST00000564060 UNQ6494/PRO21346Q6UXR6 183 aa19.88■□□□□ 0.77
CMTM3-207ENST00000564060 KDM7AQ6ZMT4 941 aa19.88■□□□□ 0.77
CMTM3-207ENST00000564060 TMPRSS7Q7RTY8 843 aa19.88■□□□□ 0.77
CMTM3-207ENST00000564060 NT5DC3Q86UY8 548 aa19.88■□□□□ 0.77
CMTM3-207ENST00000564060 SDR16C5Q8N3Y7 309 aa19.88■□□□□ 0.77
CMTM3-207ENST00000564060 FSTL5Q8N475 847 aaPredicted RBP19.88■□□□□ 0.77
CMTM3-207ENST00000564060 FAM181AQ8N9Y4 354 aa19.88■□□□□ 0.77
CMTM3-207ENST00000564060 LMX1AQ8TE12 382 aa19.88■□□□□ 0.77
CMTM3-207ENST00000564060 DTD2Q96FN9 168 aa19.88■□□□□ 0.77
CMTM3-207ENST00000564060 LACRTQ9GZZ8 138 aa19.88■□□□□ 0.77
CMTM3-207ENST00000564060 WDR26Q9H7D7 661 aa19.88■□□□□ 0.77
CMTM3-207ENST00000564060 KLQ9UEF7 1012 aa19.88■□□□□ 0.77
CMTM3-207ENST00000564060 KLF15Q9UIH9 416 aa19.88■□□□□ 0.77
CMTM3-207ENST00000564060 CHKBQ9Y259 395 aa19.88■□□□□ 0.77
CMTM3-207ENST00000564060 EFR3BQ9Y2G0 817 aa19.88■□□□□ 0.77
CMTM3-207ENST00000564060 OR1A2Q9Y585 309 aa19.88■□□□□ 0.77
CMTM3-207ENST00000564060 PCDHA3Q9Y5H8 950 aa19.88■□□□□ 0.77
CMTM3-207ENST00000564060 TMEM8BA6NDV4 472 aa19.87■□□□□ 0.77
CMTM3-207ENST00000564060 CAPN8A6NHC0 703 aa19.87■□□□□ 0.77
CMTM3-207ENST00000564060 K7ESM1 405 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms