RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 APOBEC3BQ9UH17 382 aaKnown RBP4.39□□□□□ -1.71
SNX1-205ENST00000559339 AMFRQ9UKV5 643 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 RPL26L1Q9UNX3 145 aaKnown RBP4.39□□□□□ -1.71
SNX1-205ENST00000559339 DOLKQ9UPQ8 538 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 CA5BQ9Y2D0 317 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 EFR3BQ9Y2G0 817 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 PCDHGA1Q9Y5H4 931 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 RAI2Q9Y5P3 530 aa4.39□□□□□ -1.71
SNX1-205ENST00000559339 CABIN1Q9Y6J0 2220 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 DOCK4Q8N1I0 1966 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 hCG_1818297A0A087WSY0 165 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 GOLGA6CA6NDK9 693 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 GOLGA6BA6NDN3 693 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 NPIPB15A6NHN6 443 aaPredicted RBP4.38□□□□□ -1.71
SNX1-205ENST00000559339 MIF4GDA9UHW6 222 aaKnown RBP4.38□□□□□ -1.71
SNX1-205ENST00000559339 HACD1B0YJ81 288 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 ANKRD66B4E2M5 251 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 APOC4-APOC2K7ER74 178 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 ENC1O14682 589 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 TPP1O14773 563 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 SNPHO15079 494 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 RAD51BO15315 384 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 FFAR2O15552 330 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 ARHGAP6O43182 974 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 ZW10O43264 779 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 SPINT1O43278 529 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 AQP9O43315 295 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 HYAL3O43820 417 aaPredicted RBP4.38□□□□□ -1.71
SNX1-205ENST00000559339 RFPL3O75679 317 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 PIAS2O75928 621 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 HEXIM1O94992 359 aaKnown RBP4.38□□□□□ -1.71
SNX1-205ENST00000559339 RASGRP1O95267 797 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 TNFP01375 233 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 APOC2P02655 101 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 PRKCGP05129 697 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 HLA-DQB2P05538 268 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 ANXA6P08133 673 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 PDHA1P08559 390 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 ALPIP09923 528 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 CCDC175P0C221 793 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 GOLGA6DP0CG33 693 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 TSHRP16473 764 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 ITIH2P19823 946 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 PMLP29590 882 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 VIPR1P32241 457 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 CTNNA1P35221 906 aaKnown RBP4.38□□□□□ -1.71
SNX1-205ENST00000559339 IGFALSP35858 605 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 TRIM23P36406 574 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 CD86P42081 329 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 HK3P52790 923 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 IFI35P80217 286 aaPredicted RBP4.38□□□□□ -1.71
SNX1-205ENST00000559339 E2F1Q01094 437 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 DSC2Q02487 901 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 SLC10A2Q12908 348 aaPredicted RBP4.38□□□□□ -1.71
SNX1-205ENST00000559339 TRAF2Q12933 501 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 BNIP3Q12983 259 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 XRCC4Q13426 336 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 FZD2Q14332 565 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 NFATC4Q14934 902 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 IRF4Q15306 451 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 ELOCQ15369 112 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 PPP2R5EQ16537 467 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 TEX44Q53QW1 395 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 ZNF542PQ5EBM4 170 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 PRRT3Q5FWE3 981 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 LRRC66Q68CR7 880 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 ALG1LQ6GMV1 187 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 RAET1GQ6H3X3 334 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 ESRP1Q6NXG1 681 aaKnown RBP4.38□□□□□ -1.71
SNX1-205ENST00000559339 ZCCHC8Q6NZY4 707 aaKnown RBP4.38□□□□□ -1.71
SNX1-205ENST00000559339 PNCKQ6P2M8 343 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 LVRNQ6Q4G3 990 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 ENPP7Q6UWV6 458 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 RAD9BQ6WBX8 426 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 SPOCD1Q6ZMY3 1216 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 PID1Q7Z2X4 250 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 ZC3H18Q86VM9 953 aaKnown RBP4.38□□□□□ -1.71
SNX1-205ENST00000559339 TMPRSS12Q86WS5 348 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 ZSWIM9Q86XI8 627 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 GKN2Q86XP6 184 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 CPNE8Q86YQ8 564 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 RAVER1Q8IY67 606 aaKnown RBP4.38□□□□□ -1.71
SNX1-205ENST00000559339 PHACTR4Q8IZ21 702 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 SLC25A45Q8N413 288 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 PGBD5Q8N414 524 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 FSTL5Q8N475 847 aaPredicted RBP4.38□□□□□ -1.71
SNX1-205ENST00000559339 CHCHD4Q8N4Q1 142 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 PNPLA1Q8N8W4 532 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 TTC13Q8NBP0 860 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 TP53I13Q8NBR0 393 aaPredicted RBP4.38□□□□□ -1.71
SNX1-205ENST00000559339 ACRBPQ8NEB7 543 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 LPCAT1Q8NF37 534 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 OR56A4Q8NGH8 313 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 OR4C6Q8NH72 309 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 BAHD1Q8TBE0 780 aaPredicted RBP4.38□□□□□ -1.71
SNX1-205ENST00000559339 LMX1AQ8TE12 382 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 HTR3CQ8WXA8 447 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 ADAMTS14Q8WXS8 1223 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 VOPP1Q96AW1 172 aa4.38□□□□□ -1.71
SNX1-205ENST00000559339 NUS1Q96E22 293 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms