RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 OR2A14Q96R47 310 aa11.32□□□□□ -0.6
CASC4-208ENST00000559151 IFIH1Q9BYX4 1025 aaKnown RBP11.32□□□□□ -0.6
CASC4-208ENST00000559151 TXLNGYQ9BZA5 131 aa11.32□□□□□ -0.6
CASC4-208ENST00000559151 NFE2L3Q9Y4A8 694 aa11.32□□□□□ -0.6
CASC4-208ENST00000559151 CGB1A6NKQ9 187 aa11.31□□□□□ -0.6
CASC4-208ENST00000559151 SH2B2O14492 632 aaPredicted RBP11.31□□□□□ -0.6
CASC4-208ENST00000559151 ADAM20O43506 726 aa11.31□□□□□ -0.6
CASC4-208ENST00000559151 MTA2O94776 668 aa11.31□□□□□ -0.6
CASC4-208ENST00000559151 TPPPO94811 219 aa11.31□□□□□ -0.6
CASC4-208ENST00000559151 KLKB1P03952 638 aa11.31□□□□□ -0.6
CASC4-208ENST00000559151 KELP23276 732 aa11.31□□□□□ -0.6
CASC4-208ENST00000559151 NRIP1P48552 1158 aa11.31□□□□□ -0.6
CASC4-208ENST00000559151 MFAP4P55083 255 aa11.31□□□□□ -0.6
CASC4-208ENST00000559151 NAB2Q15742 525 aa11.31□□□□□ -0.6
CASC4-208ENST00000559151 BMP2KLQ5H9B9 411 aa11.31□□□□□ -0.6
CASC4-208ENST00000559151 PRPF39Q86UA1 669 aaKnown RBP11.31□□□□□ -0.6
CASC4-208ENST00000559151 HJURPQ8NCD3 748 aaPredicted RBP11.31□□□□□ -0.6
CASC4-208ENST00000559151 OTULINQ96BN8 352 aa11.31□□□□□ -0.6
CASC4-208ENST00000559151 ZFYVE19Q96K21 471 aa11.31□□□□□ -0.6
CASC4-208ENST00000559151 MRPL15Q9P015 296 aaKnown RBP11.31□□□□□ -0.6
CASC4-208ENST00000559151 GAGE12JA6NER3 117 aa11.3□□□□□ -0.6
CASC4-208ENST00000559151 SRPRAP08240 638 aaKnown RBP11.3□□□□□ -0.6
CASC4-208ENST00000559151 TMEM11P17152 192 aa11.3□□□□□ -0.6
CASC4-208ENST00000559151 SELENOVP59797 346 aa11.3□□□□□ -0.6
CASC4-208ENST00000559151 CALD1Q05682 793 aaKnown RBP11.3□□□□□ -0.6
CASC4-208ENST00000559151 KRT24Q2M2I5 525 aa11.3□□□□□ -0.6
CASC4-208ENST00000559151 Q5PR19 223 aa11.3□□□□□ -0.6
CASC4-208ENST00000559151 PMS2CLQ68D20 193 aa11.3□□□□□ -0.6
CASC4-208ENST00000559151 WDR63Q8IWG1 891 aa11.3□□□□□ -0.6
CASC4-208ENST00000559151 IGSF8Q969P0 613 aa11.3□□□□□ -0.6
CASC4-208ENST00000559151 COQ8BQ96D53 544 aa11.3□□□□□ -0.6
CASC4-208ENST00000559151 ZG16BQ96DA0 208 aa11.3□□□□□ -0.6
CASC4-208ENST00000559151 HEY2Q9UBP5 337 aa11.3□□□□□ -0.6
CASC4-208ENST00000559151 R3HDM2Q9Y2K5 976 aaKnown RBP11.3□□□□□ -0.6
CASC4-208ENST00000559151 TMEM272A0A1B0GTI8 110 aa11.29□□□□□ -0.6
CASC4-208ENST00000559151 TMEM202A6NGA9 273 aa11.29□□□□□ -0.6
CASC4-208ENST00000559151 NDUFB8O95169 186 aa11.29□□□□□ -0.6
CASC4-208ENST00000559151 MYF6P23409 242 aa11.29□□□□□ -0.6
CASC4-208ENST00000559151 ACSM2AQ08AH3 577 aa11.29□□□□□ -0.6
CASC4-208ENST00000559151 ACSM2BQ68CK6 577 aa11.29□□□□□ -0.6
CASC4-208ENST00000559151 GPR139Q6DWJ6 353 aa11.29□□□□□ -0.6
CASC4-208ENST00000559151 GABPB2Q8TAK5 448 aaPredicted RBP11.29□□□□□ -0.6
CASC4-208ENST00000559151 ARRDC2Q8TBH0 407 aa11.29□□□□□ -0.6
CASC4-208ENST00000559151 INPP5DQ92835 1189 aa11.29□□□□□ -0.6
CASC4-208ENST00000559151 SLC22A18Q96BI1 424 aa11.29□□□□□ -0.6
CASC4-208ENST00000559151 RRNAD1Q96FB5 475 aaKnown RBP11.29□□□□□ -0.6
CASC4-208ENST00000559151 VCPIP1Q96JH7 1222 aa11.29□□□□□ -0.6
CASC4-208ENST00000559151 GFM1Q96RP9 751 aaKnown RBP11.29□□□□□ -0.6
CASC4-208ENST00000559151 TRMOQ9BU70 441 aa11.29□□□□□ -0.6
CASC4-208ENST00000559151 TEX12Q9BXU0 123 aa11.29□□□□□ -0.6
CASC4-208ENST00000559151 NRIP3Q9NQ35 241 aa11.29□□□□□ -0.6
CASC4-208ENST00000559151 ERVK-11Q9UQG0 969 aa11.29□□□□□ -0.6
CASC4-208ENST00000559151 RAI2Q9Y5P3 530 aa11.29□□□□□ -0.6
CASC4-208ENST00000559151 SAT1P21673 171 aa11.28□□□□□ -0.6
CASC4-208ENST00000559151 PON1P27169 355 aa11.28□□□□□ -0.6
CASC4-208ENST00000559151 CHATP28329 748 aa11.28□□□□□ -0.6
CASC4-208ENST00000559151 HOXA13P31271 388 aaPredicted RBP11.28□□□□□ -0.6
CASC4-208ENST00000559151 P2RX3P56373 397 aa11.28□□□□□ -0.6
CASC4-208ENST00000559151 SRSF4Q08170 494 aaKnown RBP11.28□□□□□ -0.6
CASC4-208ENST00000559151 ADIPOQQ15848 244 aa11.28□□□□□ -0.6
CASC4-208ENST00000559151 MMEL1Q495T6 779 aa11.28□□□□□ -0.6
CASC4-208ENST00000559151 SOWAHCQ53LP3 525 aaPredicted RBP11.28□□□□□ -0.6
CASC4-208ENST00000559151 LRIF1Q5T3J3 769 aa11.28□□□□□ -0.6
CASC4-208ENST00000559151 KRT74Q7RTS7 529 aa11.28□□□□□ -0.6
CASC4-208ENST00000559151 IL17RCQ8NAC3 791 aa11.28□□□□□ -0.6
CASC4-208ENST00000559151 CCDC191Q8NCU4 936 aa11.28□□□□□ -0.6
CASC4-208ENST00000559151 DECR2Q9NUI1 292 aa11.28□□□□□ -0.6
CASC4-208ENST00000559151 TRNAU1APQ9NX07 287 aaKnown RBP11.28□□□□□ -0.6
CASC4-208ENST00000559151 PTRH2Q9Y3E5 179 aaKnown RBP11.28□□□□□ -0.6
CASC4-208ENST00000559151 C1orf226A1L170 272 aa11.27□□□□□ -0.61
CASC4-208ENST00000559151 LDB2O43679 373 aa11.27□□□□□ -0.61
CASC4-208ENST00000559151 ZC3H11AO75152 810 aaKnown RBP eCLIP11.27□□□□□ -0.61
CASC4-208ENST00000559151 EPN2O95208 641 aa11.27□□□□□ -0.61
CASC4-208ENST00000559151 THPOP40225 353 aa11.27□□□□□ -0.61
CASC4-208ENST00000559151 HSD17B4P51659 736 aa11.27□□□□□ -0.61
CASC4-208ENST00000559151 PCLAFQ15004 111 aa11.27□□□□□ -0.61
CASC4-208ENST00000559151 TRIP6Q15654 476 aaKnown RBP11.27□□□□□ -0.61
CASC4-208ENST00000559151 NTRK2Q16620 822 aa11.27□□□□□ -0.61
CASC4-208ENST00000559151 ANKRD54Q6NXT1 300 aa11.27□□□□□ -0.61
CASC4-208ENST00000559151 SHC4Q6S5L8 630 aa11.27□□□□□ -0.61
CASC4-208ENST00000559151 PARM1Q6UWI2 310 aa11.27□□□□□ -0.61
CASC4-208ENST00000559151 PIP4P1Q86T03 277 aa11.27□□□□□ -0.61
CASC4-208ENST00000559151 PATL1Q86TB9 770 aaKnown RBP11.27□□□□□ -0.61
CASC4-208ENST00000559151 SCCPDHQ8NBX0 429 aa11.27□□□□□ -0.61
CASC4-208ENST00000559151 GPR108Q9NPR9 543 aa11.27□□□□□ -0.61
CASC4-208ENST00000559151 MAGED1Q9Y5V3 778 aaPredicted RBP11.27□□□□□ -0.61
CASC4-208ENST00000559151 OR2A25A4D2G3 310 aa11.26□□□□□ -0.61
CASC4-208ENST00000559151 H3BQ06 376 aaPredicted RBP11.26□□□□□ -0.61
CASC4-208ENST00000559151 CYC1P08574 325 aa11.26□□□□□ -0.61
CASC4-208ENST00000559151 PIGAP37287 484 aa11.26□□□□□ -0.61
CASC4-208ENST00000559151 RASA2Q15283 850 aa11.26□□□□□ -0.61
CASC4-208ENST00000559151 ZNF284Q2VY69 593 aa11.26□□□□□ -0.61
CASC4-208ENST00000559151 PCGF3Q3KNV8 242 aa11.26□□□□□ -0.61
CASC4-208ENST00000559151 ZNF626Q68DY1 528 aa11.26□□□□□ -0.61
CASC4-208ENST00000559151 NAA16Q6N069 864 aaPredicted RBP11.26□□□□□ -0.61
CASC4-208ENST00000559151 MTSS1LQ765P7 747 aa11.26□□□□□ -0.61
CASC4-208ENST00000559151 PALB2Q86YC2 1186 aa11.26□□□□□ -0.61
CASC4-208ENST00000559151 RNF168Q8IYW5 571 aaPredicted RBP11.26□□□□□ -0.61
CASC4-208ENST00000559151 TMEM163Q8TC26 289 aa11.26□□□□□ -0.61
CASC4-208ENST00000559151 APOLD1Q96LR9 279 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms