RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 BIRC2Q13490 618 aa17.01■□□□□ 0.31
XRCC3-215ENST00000555964 HLTFQ14527 1009 aaKnown RBP eCLIP17.01■□□□□ 0.31
XRCC3-215ENST00000555964 CDKAL1Q5VV42 579 aa17.01■□□□□ 0.31
XRCC3-215ENST00000555964 AFMIDQ63HM1 303 aa17.01■□□□□ 0.31
XRCC3-215ENST00000555964 LIPIQ6XZB0 460 aa17.01■□□□□ 0.31
XRCC3-215ENST00000555964 DPPA4Q7L190 304 aa17.01■□□□□ 0.31
XRCC3-215ENST00000555964 FUBP1Q96AE4 644 aaKnown RBP17.01■□□□□ 0.31
XRCC3-215ENST00000555964 ECHDC3Q96DC8 303 aa17.01■□□□□ 0.31
XRCC3-215ENST00000555964 CELF6Q96J87 481 aaKnown RBP17.01■□□□□ 0.31
XRCC3-215ENST00000555964 GSDMCQ9BYG8 508 aa17.01■□□□□ 0.31
XRCC3-215ENST00000555964 CYP4F12Q9HCS2 524 aa17.01■□□□□ 0.31
XRCC3-215ENST00000555964 PHPT1Q9NRX4 125 aaPredicted RBP17.01■□□□□ 0.31
XRCC3-215ENST00000555964 MOSPD1Q9UJG1 213 aa17.01■□□□□ 0.31
XRCC3-215ENST00000555964 SIK3Q9Y2K2 1263 aa17.01■□□□□ 0.31
XRCC3-215ENST00000555964 RNF215Q9Y6U7 377 aa17.01■□□□□ 0.31
XRCC3-215ENST00000555964 PRAMEF33A0A0G2JMD5 474 aa17■□□□□ 0.31
XRCC3-215ENST00000555964 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17■□□□□ 0.31
XRCC3-215ENST00000555964 TCRBV5S1A1TA0A578 114 aa17■□□□□ 0.31
XRCC3-215ENST00000555964 TMEM202A6NGA9 273 aa17■□□□□ 0.31
XRCC3-215ENST00000555964 HGSO14964 777 aaPredicted RBP17■□□□□ 0.31
XRCC3-215ENST00000555964 EPHB6O15197 1021 aa17■□□□□ 0.31
XRCC3-215ENST00000555964 BUB1BO60566 1050 aaPredicted RBP17■□□□□ 0.31
XRCC3-215ENST00000555964 PRAMEF10O60809 474 aa17■□□□□ 0.31
XRCC3-215ENST00000555964 MYCLP1P12525 358 aaPredicted RBP17■□□□□ 0.31
XRCC3-215ENST00000555964 TRIM23P36406 574 aa17■□□□□ 0.31
XRCC3-215ENST00000555964 ATP1A2P50993 1020 aa17■□□□□ 0.31
XRCC3-215ENST00000555964 PAPOLAP51003 745 aaKnown RBP17■□□□□ 0.31
XRCC3-215ENST00000555964 MAPK10P53779 464 aa17■□□□□ 0.31
XRCC3-215ENST00000555964 RPL7AP62424 266 aaKnown RBP17■□□□□ 0.31
XRCC3-215ENST00000555964 ILF3Q12906 894 aaKnown RBP eCLIP17■□□□□ 0.31
XRCC3-215ENST00000555964 RALGDSQ12967 914 aa17■□□□□ 0.31
XRCC3-215ENST00000555964 TMCO4Q5TGY1 634 aa17■□□□□ 0.31
XRCC3-215ENST00000555964 TENM4Q6N022 2769 aa17■□□□□ 0.31
XRCC3-215ENST00000555964 PIM3Q86V86 326 aa17■□□□□ 0.31
XRCC3-215ENST00000555964 PLA2G15Q8NCC3 412 aa17■□□□□ 0.31
XRCC3-215ENST00000555964 TSEN2Q8NCE0 465 aaKnown RBP17■□□□□ 0.31
XRCC3-215ENST00000555964 CCDC112Q8NEF3 446 aa17■□□□□ 0.31
XRCC3-215ENST00000555964 AGPAT1Q99943 283 aa17■□□□□ 0.31
XRCC3-215ENST00000555964 TMEM168Q9H0V1 697 aa17■□□□□ 0.31
XRCC3-215ENST00000555964 DHX35Q9H5Z1 703 aaKnown RBP17■□□□□ 0.31
XRCC3-215ENST00000555964 STARD5Q9NSY2 213 aa17■□□□□ 0.31
XRCC3-215ENST00000555964 CHMP5Q9NZZ3 219 aa17■□□□□ 0.31
XRCC3-215ENST00000555964 SEPT3Q9UH03 358 aa17■□□□□ 0.31
XRCC3-215ENST00000555964 ZFC3H1O60293 1989 aaKnown RBP17■□□□□ 0.31
XRCC3-215ENST00000555964 NAV2Q8IVL1 2488 aa16.99■□□□□ 0.31
XRCC3-215ENST00000555964 PRSS38A1L453 326 aa16.99■□□□□ 0.31
XRCC3-215ENST00000555964 RHPN2P1A8MT19 583 aa16.99■□□□□ 0.31
XRCC3-215ENST00000555964 PRKCGP05129 697 aa16.99■□□□□ 0.31
XRCC3-215ENST00000555964 ITIH1P19827 911 aa16.99■□□□□ 0.31
XRCC3-215ENST00000555964 HSPA9P38646 679 aaKnown RBP16.99■□□□□ 0.31
XRCC3-215ENST00000555964 IL10RBQ08334 325 aa16.99■□□□□ 0.31
XRCC3-215ENST00000555964 ACOX1Q15067 660 aa16.99■□□□□ 0.31
XRCC3-215ENST00000555964 TGIF1Q15583 401 aa16.99■□□□□ 0.31
XRCC3-215ENST00000555964 PPP1R15BQ5SWA1 713 aa16.99■□□□□ 0.31
XRCC3-215ENST00000555964 PNCKQ6P2M8 343 aa16.99■□□□□ 0.31
XRCC3-215ENST00000555964 ATG14Q6ZNE5 492 aa16.99■□□□□ 0.31
XRCC3-215ENST00000555964 ZSWIM9Q86XI8 627 aa16.99■□□□□ 0.31
XRCC3-215ENST00000555964 SLITRK4Q8IW52 837 aa16.99■□□□□ 0.31
XRCC3-215ENST00000555964 EXD3Q8N9H8 876 aa16.99■□□□□ 0.31
XRCC3-215ENST00000555964 EXTL1Q92935 676 aa16.99■□□□□ 0.31
XRCC3-215ENST00000555964 USP7Q93009 1102 aa16.99■□□□□ 0.31
XRCC3-215ENST00000555964 SEMA3CQ99985 751 aa16.99■□□□□ 0.31
XRCC3-215ENST00000555964 SLC39A8Q9C0K1 460 aa16.99■□□□□ 0.31
XRCC3-215ENST00000555964 MRPL40Q9NQ50 206 aaKnown RBP16.99■□□□□ 0.31
XRCC3-215ENST00000555964 PARVAQ9NVD7 372 aa16.99■□□□□ 0.31
XRCC3-215ENST00000555964 PCDHGA4Q9Y5G9 962 aa16.99■□□□□ 0.31
XRCC3-215ENST00000555964 SDK2Q58EX2 2172 aa16.98■□□□□ 0.31
XRCC3-215ENST00000555964 LGALS16A8MUM7 142 aa16.98■□□□□ 0.31
XRCC3-215ENST00000555964 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.98■□□□□ 0.31
XRCC3-215ENST00000555964 STMND1H3BQB6 276 aa16.98■□□□□ 0.31
XRCC3-215ENST00000555964 DFFAO00273 331 aa16.98■□□□□ 0.31
XRCC3-215ENST00000555964 ARHGAP6O43182 974 aa16.98■□□□□ 0.31
XRCC3-215ENST00000555964 PPFIA2O75334 1257 aa16.98■□□□□ 0.31
XRCC3-215ENST00000555964 RNF8O76064 485 aa16.98■□□□□ 0.31
XRCC3-215ENST00000555964 CCNB1P14635 433 aa16.98■□□□□ 0.31
XRCC3-215ENST00000555964 FERP16591 822 aa16.98■□□□□ 0.31
XRCC3-215ENST00000555964 PSMA2P25787 234 aa16.98■□□□□ 0.31
XRCC3-215ENST00000555964 GPR3P46089 330 aa16.98■□□□□ 0.31
XRCC3-215ENST00000555964 RGRP47804 291 aa16.98■□□□□ 0.31
XRCC3-215ENST00000555964 SCNN1BP51168 640 aa16.98■□□□□ 0.31
XRCC3-215ENST00000555964 COPB1P53618 953 aaKnown RBP16.98■□□□□ 0.31
XRCC3-215ENST00000555964 TRA2AQ13595 282 aaKnown RBP eCLIP16.98■□□□□ 0.31
XRCC3-215ENST00000555964 LINC00303Q3SY05 128 aa16.98■□□□□ 0.31
XRCC3-215ENST00000555964 ERMARDQ5T6L9 678 aa16.98■□□□□ 0.31
XRCC3-215ENST00000555964 ACAD10Q6JQN1 1059 aa16.98■□□□□ 0.31
XRCC3-215ENST00000555964 RFX8Q6ZV50 586 aa16.98■□□□□ 0.31
XRCC3-215ENST00000555964 PSTKQ8IV42 348 aaKnown RBP16.98■□□□□ 0.31
XRCC3-215ENST00000555964 MCOLN2Q8IZK6 566 aa16.98■□□□□ 0.31
XRCC3-215ENST00000555964 BBS5Q8N3I7 341 aa16.98■□□□□ 0.31
XRCC3-215ENST00000555964 LZTR1Q8N653 840 aa16.98■□□□□ 0.31
XRCC3-215ENST00000555964 GPBAR1Q8TDU6 330 aa16.98■□□□□ 0.31
XRCC3-215ENST00000555964 SPOCK2Q92563 424 aa16.98■□□□□ 0.31
XRCC3-215ENST00000555964 NUS1Q96E22 293 aa16.98■□□□□ 0.31
XRCC3-215ENST00000555964 ZNF599Q96NL3 588 aa16.98■□□□□ 0.31
XRCC3-215ENST00000555964 DPYSL5Q9BPU6 564 aa16.98■□□□□ 0.31
XRCC3-215ENST00000555964 CARS2Q9HA77 564 aaKnown RBP16.98■□□□□ 0.31
XRCC3-215ENST00000555964 TRNAU1APQ9NX07 287 aaKnown RBP16.98■□□□□ 0.31
XRCC3-215ENST00000555964 MAST4O15021 2626 aa16.97■□□□□ 0.31
XRCC3-215ENST00000555964 TEX33O43247 280 aa16.97■□□□□ 0.31
XRCC3-215ENST00000555964 PRPSAP2O60256 369 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms