RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 NDUFAF2Q8N183 169 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 PPP1R2P1Q96PQ5 205 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 FOXQ1Q9C009 403 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 SOX13Q9UN79 622 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 SLC27A6Q9Y2P4 619 aa10.23□□□□□ -0.77
NEK9-205ENST00000555405 LOC285095A0A1B0GVY8 99 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 MT-ND3P03897 115 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 MGAT5Q09328 741 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 ACOX1Q15067 660 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 SEPT7Q16181 437 aaKnown RBP10.22□□□□□ -0.77
NEK9-205ENST00000555405 KLHL38Q2WGJ6 581 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 HNRNPA1L2Q32P51 320 aaKnown RBP10.22□□□□□ -0.77
NEK9-205ENST00000555405 RAPH1Q70E73 1250 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 BRSK1Q8TDC3 778 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 FRS2Q8WU20 508 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 HMGB4Q8WW32 186 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 SCAMP4Q969E2 229 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 LRRC39Q96DD0 335 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 NDNQ99608 321 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 OMDQ99983 421 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 VPS11Q9H270 941 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 CAB39LQ9H9S4 337 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 GGT7Q9UJ14 662 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 SLC30A1Q9Y6M5 507 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 A0A1W2PP55 124 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 CCDC162PA2VCL2 907 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 NPIPB15A6NHN6 443 aaPredicted RBP10.22□□□□□ -0.77
NEK9-205ENST00000555405 C16orf96A6NNT2 1141 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 ANHXE9PGG2 379 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 MID1O15344 667 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 LZTS3O60299 673 aaPredicted RBP10.22□□□□□ -0.77
NEK9-205ENST00000555405 RNASEH1O60930 286 aaKnown RBP10.22□□□□□ -0.77
NEK9-205ENST00000555405 SYF2O95926 243 aaKnown RBP10.22□□□□□ -0.77
NEK9-205ENST00000555405 LPOP22079 712 aaPredicted RBP10.22□□□□□ -0.77
NEK9-205ENST00000555405 EIF3BP55884 814 aaKnown RBP10.22□□□□□ -0.77
NEK9-205ENST00000555405 PFKPQ01813 784 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 LRRC14Q15048 493 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 UGP2Q16851 508 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 TTMPQ5BVD1 217 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 MDM1Q8TC05 714 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 PIH1D2Q8WWB5 315 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 OSBPL6Q9BZF3 934 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 PCDH12Q9NPG4 1184 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 SLC39A10Q9ULF5 831 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 INVSQ9Y283 1065 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 NFS1Q9Y697 457 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 WASF2Q9Y6W5 498 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 WDR91A4D1P6 747 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 TIMM44O43615 452 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 DNAJC6O75061 913 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 GOT2P00505 430 aaKnown RBP10.22□□□□□ -0.77
NEK9-205ENST00000555405 SPANXN3Q5MJ09 141 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 LRRC66Q68CR7 880 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 USP45Q70EL2 814 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 TMPRSS6Q8IU80 811 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 SIX5Q8N196 739 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 KRT222Q8N1A0 295 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 SPATA6LQ8N4H0 392 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 HDDC3Q8N4P3 179 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 CCDC63Q8NA47 563 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 NAT9Q9BTE0 207 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 ACSS3Q9H6R3 686 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 PLAC1Q9HBJ0 212 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 PRSS16Q9NQE7 514 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 ZNF711Q9Y462 761 aa10.22□□□□□ -0.77
NEK9-205ENST00000555405 EDDM13A0A1B0GTR0 161 aa10.21□□□□□ -0.77
NEK9-205ENST00000555405 FAM237BA0A1B0GVD1 139 aa10.21□□□□□ -0.77
NEK9-205ENST00000555405 MAGEB16A2A368 324 aa10.21□□□□□ -0.77
NEK9-205ENST00000555405 MMP20O60882 483 aa10.21□□□□□ -0.77
NEK9-205ENST00000555405 MTX2O75431 263 aa10.21□□□□□ -0.77
NEK9-205ENST00000555405 CES1P23141 567 aa10.21□□□□□ -0.77
NEK9-205ENST00000555405 MC4RP32245 332 aa10.21□□□□□ -0.77
NEK9-205ENST00000555405 MAPK8P45983 427 aa10.21□□□□□ -0.77
NEK9-205ENST00000555405 EIF4HQ15056 248 aaKnown RBP10.21□□□□□ -0.77
NEK9-205ENST00000555405 ZNF789Q5FWF6 425 aa10.21□□□□□ -0.77
NEK9-205ENST00000555405 C9orf64Q5T6V5 341 aa10.21□□□□□ -0.77
NEK9-205ENST00000555405 Q6ZVL8 140 aa10.21□□□□□ -0.77
NEK9-205ENST00000555405 METTL3Q86U44 580 aaKnown RBP10.21□□□□□ -0.77
NEK9-205ENST00000555405 EZH1Q92800 747 aaPredicted RBP10.21□□□□□ -0.77
NEK9-205ENST00000555405 CDKN2AIPNLQ96HQ2 116 aa10.21□□□□□ -0.77
NEK9-205ENST00000555405 MARCH4Q9P2E8 410 aaPredicted RBP10.21□□□□□ -0.77
NEK9-205ENST00000555405 MTF2Q9Y483 593 aaPredicted RBP10.21□□□□□ -0.77
NEK9-205ENST00000555405 ARIH1Q9Y4X5 557 aaPredicted RBP10.21□□□□□ -0.77
NEK9-205ENST00000555405 A0A0J9YYE9 177 aa10.21□□□□□ -0.78
NEK9-205ENST00000555405 ZCWPW2A0A1B0GU75 182 aa10.21□□□□□ -0.78
NEK9-205ENST00000555405 K7EQS6 105 aa10.21□□□□□ -0.78
NEK9-205ENST00000555405 AP3B1O00203 1094 aa10.21□□□□□ -0.78
NEK9-205ENST00000555405 SCAMP1O15126 338 aa10.21□□□□□ -0.78
NEK9-205ENST00000555405 INPP4BO15327 924 aa10.21□□□□□ -0.78
NEK9-205ENST00000555405 LDB2O43679 373 aa10.21□□□□□ -0.78
NEK9-205ENST00000555405 CDH16O75309 829 aa10.21□□□□□ -0.78
NEK9-205ENST00000555405 TRBC1P01850 177 aa10.21□□□□□ -0.78
NEK9-205ENST00000555405 PRNPP04156 253 aa10.21□□□□□ -0.78
NEK9-205ENST00000555405 SRPRAP08240 638 aaKnown RBP10.21□□□□□ -0.78
NEK9-205ENST00000555405 MAGEA3P43357 314 aa10.21□□□□□ -0.78
NEK9-205ENST00000555405 POLR2LP62875 67 aaKnown RBP10.21□□□□□ -0.78
NEK9-205ENST00000555405 LEXMQ3ZCV2 418 aa10.21□□□□□ -0.78
NEK9-205ENST00000555405 PREPLQ4J6C6 727 aaPredicted RBP10.21□□□□□ -0.78
NEK9-205ENST00000555405 FASTKD1Q53R41 847 aaKnown RBP10.21□□□□□ -0.78
NEK9-205ENST00000555405 ANO7Q6IWH7 933 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms