RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 GEMIN4P57678 1058 aaKnown RBP9.1□□□□□ -0.95
PRKCH-208ENST00000553846 MC2RQ01718 297 aa9.1□□□□□ -0.95
PRKCH-208ENST00000553846 APBA1Q02410 837 aa9.1□□□□□ -0.95
PRKCH-208ENST00000553846 DEUP1Q05D60 604 aa9.1□□□□□ -0.95
PRKCH-208ENST00000553846 ELP6Q0PNE2 266 aa9.1□□□□□ -0.95
PRKCH-208ENST00000553846 UGP2Q16851 508 aa9.1□□□□□ -0.95
PRKCH-208ENST00000553846 DCAF12Q5T6F0 453 aa9.1□□□□□ -0.95
PRKCH-208ENST00000553846 FAM72AQ5TYM5 149 aa9.1□□□□□ -0.95
PRKCH-208ENST00000553846 NKAIN2Q5VXU1 208 aa9.1□□□□□ -0.95
PRKCH-208ENST00000553846 FAM72DQ6L9T8 149 aa9.1□□□□□ -0.95
PRKCH-208ENST00000553846 MAMDC2Q7Z304 686 aaPredicted RBP9.1□□□□□ -0.95
PRKCH-208ENST00000553846 ARHGAP22Q7Z5H3 698 aa9.1□□□□□ -0.95
PRKCH-208ENST00000553846 FAM72BQ86X60 149 aa9.1□□□□□ -0.95
PRKCH-208ENST00000553846 NETO2Q8NC67 525 aa9.1□□□□□ -0.95
PRKCH-208ENST00000553846 KIAA1524Q8TCG1 905 aa9.1□□□□□ -0.95
PRKCH-208ENST00000553846 HCAR2Q8TDS4 363 aa9.1□□□□□ -0.95
PRKCH-208ENST00000553846 HMCESQ96FZ2 354 aa9.1□□□□□ -0.95
PRKCH-208ENST00000553846 TCTN2Q96GX1 697 aa9.1□□□□□ -0.95
PRKCH-208ENST00000553846 TEFMQ96QE5 360 aaKnown RBP9.1□□□□□ -0.95
PRKCH-208ENST00000553846 TSG101Q99816 390 aa9.1□□□□□ -0.95
PRKCH-208ENST00000553846 MAGEH1Q9H213 219 aa9.1□□□□□ -0.95
PRKCH-208ENST00000553846 DPEP2Q9H4A9 486 aa9.1□□□□□ -0.95
PRKCH-208ENST00000553846 RETREG1Q9H6L5 497 aa9.1□□□□□ -0.95
PRKCH-208ENST00000553846 PRDM8Q9NQV8 689 aa9.1□□□□□ -0.95
PRKCH-208ENST00000553846 TMEM248Q9NWD8 314 aa9.1□□□□□ -0.95
PRKCH-208ENST00000553846 SIDT1Q9NXL6 827 aaKnown RBP9.1□□□□□ -0.95
PRKCH-208ENST00000553846 SLC39A1Q9NY26 324 aa9.1□□□□□ -0.95
PRKCH-208ENST00000553846 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.1□□□□□ -0.95
PRKCH-208ENST00000553846 AKAP7Q9P0M2 348 aaPredicted RBP9.1□□□□□ -0.95
PRKCH-208ENST00000553846 TMEM59LQ9UK28 342 aa9.1□□□□□ -0.95
PRKCH-208ENST00000553846 AJAP1Q9UKB5 411 aaPredicted RBP9.1□□□□□ -0.95
PRKCH-208ENST00000553846 MAP4K5Q9Y4K4 846 aa9.1□□□□□ -0.95
PRKCH-208ENST00000553846 KCTD3Q9Y597 815 aa9.1□□□□□ -0.95
PRKCH-208ENST00000553846 MRPS18BQ9Y676 258 aaKnown RBP9.1□□□□□ -0.95
PRKCH-208ENST00000553846 EFCAB7A8K855 629 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 KDELR3O43731 214 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 BUB1BO60566 1050 aaPredicted RBP9.09□□□□□ -0.95
PRKCH-208ENST00000553846 RECQL5O94762 991 aaPredicted RBP9.09□□□□□ -0.95
PRKCH-208ENST00000553846 STK17BO94768 372 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 F9P00740 461 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 LDLRP01130 860 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 CEACAM5P06731 702 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 RHOQP17081 205 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 MPSTP25325 297 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 ALDH4A1P30038 563 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 PMS2P54278 862 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 MAP7Q14244 749 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 INO80DQ53TQ3 878 aaPredicted RBP9.09□□□□□ -0.95
PRKCH-208ENST00000553846 C1QL3Q5VWW1 255 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 SMYD5Q6GMV2 418 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 TRIM65Q6PJ69 517 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 ASB18Q6ZVZ8 466 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 ENOSF1Q7L5Y1 443 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 FAM131BQ86XD5 332 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 XYLT1Q86Y38 959 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 ZDHHC17Q8IUH5 632 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 CCDC13Q8IYE1 715 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 RYBPQ8N488 228 aaPredicted RBP9.09□□□□□ -0.95
PRKCH-208ENST00000553846 CCDC112Q8NEF3 446 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 CPT1CQ8TCG5 803 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 ZDHHC1Q8WTX9 485 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 ECHDC3Q96DC8 303 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 GSDMAQ96QA5 445 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 FRMD8Q9BZ67 464 aaPredicted RBP9.09□□□□□ -0.95
PRKCH-208ENST00000553846 MAGEB5Q9BZ81 275 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 GTPBP4Q9BZE4 634 aaKnown RBP9.09□□□□□ -0.95
PRKCH-208ENST00000553846 SCAND2PQ9GZW5 306 aaPredicted RBP9.09□□□□□ -0.95
PRKCH-208ENST00000553846 ZNF768Q9H5H4 540 aaKnown RBP9.09□□□□□ -0.95
PRKCH-208ENST00000553846 CYP4F12Q9HCS2 524 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 APMAPQ9HDC9 416 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 MLXIPLQ9NP71 852 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 UBE2TQ9NPD8 197 aaPredicted RBP9.09□□□□□ -0.95
PRKCH-208ENST00000553846 TMEM51Q9NW97 253 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 TAAR2Q9P1P5 351 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 STAP1Q9ULZ2 295 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 SRPK3Q9UPE1 567 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 ATP8A1Q9Y2Q0 1164 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 ZDHHC9Q9Y397 364 aa9.09□□□□□ -0.95
PRKCH-208ENST00000553846 CCDC168Q8NDH2 2452 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 ZSCAN5CA6NGD5 496 aaPredicted RBP9.08□□□□□ -0.96
PRKCH-208ENST00000553846 RHPN2P1A8MT19 583 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 RAMP2O60895 175 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 VPS4BO75351 444 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 LRIG2O94898 1065 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 MAP3K6O95382 1288 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 DDAH2O95865 285 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 IGSF6O95976 241 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 TCN2P20062 427 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 ELAVL4P26378 380 aaKnown RBP9.08□□□□□ -0.96
PRKCH-208ENST00000553846 AK4P27144 223 aaPredicted RBP9.08□□□□□ -0.96
PRKCH-208ENST00000553846 CSTF2P33240 577 aaKnown RBP eCLIP9.08□□□□□ -0.96
PRKCH-208ENST00000553846 FASLGP48023 281 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 MC1RQ01726 317 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 CYTH1Q15438 398 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 PAPD7Q5XG87 772 aaKnown RBP9.08□□□□□ -0.96
PRKCH-208ENST00000553846 AFMIDQ63HM1 303 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 TMEM71Q6P5X7 295 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 LIPIQ6XZB0 460 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 ARCQ7LC44 396 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 TMEM135Q86UB9 458 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms