RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 LRCH1Q9Y2L9 728 aa16.86■□□□□ 0.29
SCARB1-205ENST00000538291 RAP2CQ9Y3L5 183 aa16.86■□□□□ 0.29
SCARB1-205ENST00000538291 MCIDASD6RGH6 385 aa16.86■□□□□ 0.29
SCARB1-205ENST00000538291 ALOX12P18054 663 aa16.86■□□□□ 0.29
SCARB1-205ENST00000538291 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.86■□□□□ 0.29
SCARB1-205ENST00000538291 DNAJB14Q8TBM8 379 aa16.86■□□□□ 0.29
SCARB1-205ENST00000538291 AZIN1O14977 448 aa16.86■□□□□ 0.29
SCARB1-205ENST00000538291 LYPLA2O95372 231 aa16.86■□□□□ 0.29
SCARB1-205ENST00000538291 ZNF697Q5TEC3 545 aa16.86■□□□□ 0.29
SCARB1-205ENST00000538291 CAPN13Q6MZZ7 669 aaPredicted RBP16.86■□□□□ 0.29
SCARB1-205ENST00000538291 STRADAQ7RTN6 431 aa16.86■□□□□ 0.29
SCARB1-205ENST00000538291 OR6K2Q8NGY2 324 aa16.86■□□□□ 0.29
SCARB1-205ENST00000538291 MFSD14AQ96MC6 490 aa16.86■□□□□ 0.29
SCARB1-205ENST00000538291 KLHL5Q96PQ7 755 aa16.86■□□□□ 0.29
SCARB1-205ENST00000538291 GPR20Q99678 358 aa16.86■□□□□ 0.29
SCARB1-205ENST00000538291 KIFC1Q9BW19 673 aa16.86■□□□□ 0.29
SCARB1-205ENST00000538291 NUAK2Q9H093 628 aa16.86■□□□□ 0.29
SCARB1-205ENST00000538291 RWDD3Q9Y3V2 267 aa16.86■□□□□ 0.29
SCARB1-205ENST00000538291 PPIBP23284 216 aaKnown RBP16.85■□□□□ 0.29
SCARB1-205ENST00000538291 UGT2B15P54855 530 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 USP46P62068 366 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 RPL7AP62424 266 aaKnown RBP16.85■□□□□ 0.29
SCARB1-205ENST00000538291 UBE2R2Q712K3 238 aaPredicted RBP16.85■□□□□ 0.29
SCARB1-205ENST00000538291 DEPDC4Q8N2C3 294 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 MAGEE2Q8TD90 523 aaPredicted RBP16.85■□□□□ 0.29
SCARB1-205ENST00000538291 PPCDCQ96CD2 204 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 SPAG4Q9NPE6 437 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 VWA7Q9Y334 891 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 RIC1Q4ADV7 1423 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 GRIA3P42263 894 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 SSR2P43308 183 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 PSME3P61289 254 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 PPIGQ13427 754 aaKnown RBP eCLIP16.85■□□□□ 0.297e-9■□□□□ 11
SCARB1-205ENST00000538291 ARMC3Q5W041 872 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 SCIMPQ6UWF3 145 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 IKBIPQ70UQ0 350 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 CFAP52Q8N1V2 620 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 ITCHQ96J02 903 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 ELL3Q9HB65 397 aaPredicted RBP16.85■□□□□ 0.29
SCARB1-205ENST00000538291 XPR1Q9UBH6 696 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 BTNL10A8MVZ5 291 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 PARP15Q460N3 678 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 LIPMQ5VYY2 423 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 PSRC1Q6PGN9 363 aaPredicted RBP16.85■□□□□ 0.29
SCARB1-205ENST00000538291 KLHL17Q6TDP4 642 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 POP5Q969H6 163 aaKnown RBP16.85■□□□□ 0.29
SCARB1-205ENST00000538291 ACAT2Q9BWD1 397 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 PRRG4Q9BZD6 226 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 SMIM28A0A1B0GU29 152 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 A0A1W2PQ67 120 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 HDAC3O15379 428 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 LGALS3BPQ08380 585 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 EEF1AKMT1Q8WVE0 214 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 CKAP2Q8WWK9 683 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 DCUN1D5Q9BTE7 237 aa16.85■□□□□ 0.29
SCARB1-205ENST00000538291 TM4SF1P30408 202 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 BUD31P41223 144 aaPredicted RBP16.84■□□□□ 0.29
SCARB1-205ENST00000538291 DGKZQ13574 1117 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 SIX5Q8N196 739 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 PHC3Q8NDX5 983 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 ZNF398Q8TD17 642 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 GLOD4Q9HC38 313 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 C3orf18Q9UK00 162 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 FAM237BA0A1B0GVD1 139 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 CCL16O15467 120 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 KLHL18O94889 574 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 TSPAN8P19075 237 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 IDSP22304 550 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 SLAIN1Q8ND83 568 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 CNPPD1Q9BV87 410 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 PLK2Q9NYY3 685 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 GMPPBQ9Y5P6 360 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 RFXANKO14593 260 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 COX4I1P13073 169 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 CORO1AP31146 461 aaKnown RBP16.84■□□□□ 0.29
SCARB1-205ENST00000538291 ITGB3BPQ13352 177 aaPredicted RBP16.84■□□□□ 0.29
SCARB1-205ENST00000538291 BMT2Q1RMZ1 405 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 INPP4AQ96PE3 977 aaPredicted RBP16.84■□□□□ 0.29
SCARB1-205ENST00000538291 CMTM6Q9NX76 183 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 GGA2Q9UJY4 613 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 IKZF3Q9UKT9 509 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 KLRC4O43908 158 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 VIPP01282 170 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 DGCR6Q14129 220 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 TAF5Q15542 800 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 DDI2Q5TDH0 399 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 TATDN1Q6P1N9 297 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 AIF1LQ9BQI0 150 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 DGCR6LQ9BY27 220 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 LHX5Q9H2C1 402 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 EXD2Q9NVH0 621 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 PADI3Q9ULW8 664 aa16.84■□□□□ 0.29
SCARB1-205ENST00000538291 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.83■□□□□ 0.29
SCARB1-205ENST00000538291 OR10H3O60404 316 aa16.83■□□□□ 0.29
SCARB1-205ENST00000538291 C1RP00736 705 aa16.83■□□□□ 0.29
SCARB1-205ENST00000538291 ITPKBP27987 946 aa16.83■□□□□ 0.29
SCARB1-205ENST00000538291 ABHD15Q6UXT9 468 aa16.83■□□□□ 0.29
SCARB1-205ENST00000538291 ZNF354BQ96LW1 612 aa16.83■□□□□ 0.29
SCARB1-205ENST00000538291 KPNA4O00629 521 aaPredicted RBP16.83■□□□□ 0.29
SCARB1-205ENST00000538291 B4GALT4O60513 344 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms