RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 LINC00303Q3SY05 128 aa13.02□□□□□ -0.33
TNFRSF1A-207ENST00000535958 SRLQ86TD4 932 aa13.02□□□□□ -0.33
TNFRSF1A-207ENST00000535958 ZFAND4Q86XD8 727 aa13.02□□□□□ -0.33
TNFRSF1A-207ENST00000535958 PLA2G15Q8NCC3 412 aa13.02□□□□□ -0.33
TNFRSF1A-207ENST00000535958 NEK11Q8NG66 645 aa13.02□□□□□ -0.33
TNFRSF1A-207ENST00000535958 FUBP1Q96AE4 644 aaKnown RBP13.02□□□□□ -0.33
TNFRSF1A-207ENST00000535958 CELF6Q96J87 481 aaKnown RBP13.02□□□□□ -0.33
TNFRSF1A-207ENST00000535958 CNPY3Q9BT09 278 aa13.02□□□□□ -0.33
TNFRSF1A-207ENST00000535958 GSDMCQ9BYG8 508 aa13.02□□□□□ -0.33
TNFRSF1A-207ENST00000535958 TMEM168Q9H0V1 697 aa13.02□□□□□ -0.33
TNFRSF1A-207ENST00000535958 CARS2Q9HA77 564 aaKnown RBP13.02□□□□□ -0.33
TNFRSF1A-207ENST00000535958 PHPT1Q9NRX4 125 aaPredicted RBP13.02□□□□□ -0.33
TNFRSF1A-207ENST00000535958 STARD5Q9NSY2 213 aa13.02□□□□□ -0.33
TNFRSF1A-207ENST00000535958 FOXJ2Q9P0K8 574 aa13.02□□□□□ -0.33
TNFRSF1A-207ENST00000535958 AHCTF1Q8WYP5 2266 aa13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 PRSS38A1L453 326 aa13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 GOLGA6CA6NDK9 693 aa13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 GOLGA6BA6NDN3 693 aa13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 J3KR12 359 aa13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 DFFAO00273 331 aa13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 GOLGA6DP0CG33 693 aa13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 ALDH4A1P30038 563 aa13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 ETV5P41161 510 aa13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 KLK7P49862 253 aa13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 PAPOLAP51003 745 aaKnown RBP13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 RENBPP51606 427 aa13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 JAM2P57087 298 aa13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 NFKB2Q00653 900 aa13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 ZFP36L1Q07352 338 aaKnown RBP13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 PTP4A2Q12974 167 aa13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 HLTFQ14527 1009 aaKnown RBP eCLIP13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 CT47A1Q5JQC4 288 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 OGFOD3Q6PK18 319 aa13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 DPPA4Q7L190 304 aa13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 PHF13Q86YI8 300 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 IL22RA1Q8N6P7 574 aa13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 NUS1Q96E22 293 aa13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 PDFQ9HBH1 243 aa13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 RDH14Q9HBH5 336 aa13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 KCTD5Q9NXV2 234 aa13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 GOLGA6AQ9NYA3 693 aa13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 SEPT3Q9UH03 358 aa13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 AP4E1Q9UPM8 1137 aa13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 SCN8AQ9UQD0 1980 aa13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 UNC13CQ8NB66 2214 aa13.01□□□□□ -0.33
TNFRSF1A-207ENST00000535958 EIF3CLB5ME19 914 aaKnown RBP13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 HGSO14964 777 aaPredicted RBP13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 BUB1BO60566 1050 aaPredicted RBP13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 HOXC4P09017 264 aaPredicted RBP13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 CCDC172P0C7W6 258 aa13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 MYCLP1P12525 358 aaPredicted RBP13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 CCNB1P14635 433 aa13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 CSNK1DP48730 415 aa13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 SCNN1BP51168 640 aa13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 MAZP56270 477 aaKnown RBP13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 AP1S1P61966 158 aa13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 ZNF235Q14590 738 aa13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 RFTN1Q14699 578 aaPredicted RBP13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 TBR1Q16650 682 aa13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 CLPPQ16740 277 aaPredicted RBP13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 DENND2CQ68D51 928 aa13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 LIPIQ6XZB0 460 aa13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 NYAP1Q6ZVC0 841 aa13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 MON1BQ7L1V2 547 aa13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 ZSWIM9Q86XI8 627 aa13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 SLITRK4Q8IW52 837 aa13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 TSEN2Q8NCE0 465 aaKnown RBP13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 ZDHHC1Q8WTX9 485 aa13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 PDCD6IPQ8WUM4 868 aaKnown RBP13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 JPH3Q8WXH2 748 aaPredicted RBP13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 PCDHB18PQ96TA0 734 aa13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 EIF3CQ99613 913 aaKnown RBP13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 SEMA3CQ99985 751 aa13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 B3GNT4Q9C0J1 378 aa13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 SEMA6CQ9H3T2 930 aa13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 DHX35Q9H5Z1 703 aaKnown RBP13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 LRRC19Q9H756 370 aa13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 MAST4O15021 2626 aa13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 SPTA1P02549 2419 aa13□□□□□ -0.33
TNFRSF1A-207ENST00000535958 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.99□□□□□ -0.33
TNFRSF1A-207ENST00000535958 A0A1W2PQ67 120 aa12.99□□□□□ -0.33
TNFRSF1A-207ENST00000535958 A8MX80 341 aa12.99□□□□□ -0.33
TNFRSF1A-207ENST00000535958 C9orf172C9J069 976 aa12.99□□□□□ -0.33
TNFRSF1A-207ENST00000535958 TERTO14746 1132 aaKnown RBP12.99□□□□□ -0.33
TNFRSF1A-207ENST00000535958 PSMA2P25787 234 aa12.99□□□□□ -0.33
TNFRSF1A-207ENST00000535958 CSTF2P33240 577 aaKnown RBP eCLIP12.99□□□□□ -0.337e-7■□□□□ 8.4
TNFRSF1A-207ENST00000535958 NOP2P46087 812 aaKnown RBP12.99□□□□□ -0.33
TNFRSF1A-207ENST00000535958 GNPDA1P46926 289 aa12.99□□□□□ -0.33
TNFRSF1A-207ENST00000535958 OR1D5P58170 312 aa12.99□□□□□ -0.33
TNFRSF1A-207ENST00000535958 RPL7AP62424 266 aaKnown RBP12.99□□□□□ -0.33
TNFRSF1A-207ENST00000535958 CYP4F2P78329 520 aa12.99□□□□□ -0.33
TNFRSF1A-207ENST00000535958 RALGDSQ12967 914 aa12.99□□□□□ -0.33
TNFRSF1A-207ENST00000535958 C16orf72Q14CZ0 275 aa12.99□□□□□ -0.33
TNFRSF1A-207ENST00000535958 KRT31Q15323 416 aa12.99□□□□□ -0.33
TNFRSF1A-207ENST00000535958 KCTD16Q68DU8 428 aa12.99□□□□□ -0.33
TNFRSF1A-207ENST00000535958 PPP1R2P3Q6NXS1 205 aa12.99□□□□□ -0.33
TNFRSF1A-207ENST00000535958 PNCKQ6P2M8 343 aa12.99□□□□□ -0.33
TNFRSF1A-207ENST00000535958 ZNF574Q6ZN55 896 aaPredicted RBP12.99□□□□□ -0.33
TNFRSF1A-207ENST00000535958 BBS5Q8N3I7 341 aa12.99□□□□□ -0.33
TNFRSF1A-207ENST00000535958 RCBTB1Q8NDN9 531 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms