RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	TAS2R39	P59534	338 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	ADGRE1	Q14246	886 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	ZNF460	Q14592	562 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	TAF1A	Q15573	450 aa	Predicted RBP	10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	RALGPS1	Q5JS13	557 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	ALG1L	Q6GMV1	187 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	RETSAT	Q6NUM9	610 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	PSRC1	Q6PGN9	363 aa	Predicted RBP	10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	CNST	Q6PJW8	725 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	PIWIL4	Q7Z3Z4	852 aa	Known RBP	10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	TMC7	Q7Z402	723 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	FSTL5	Q8N475	847 aa	Predicted RBP	10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	AGR3	Q8TD06	166 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	DDI1	Q8WTU0	396 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	HERVK_113	Q902F9	699 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	EXT2	Q93063	718 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	NXNL1	Q96CM4	212 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	ZNF689	Q96CS4	500 aa	Predicted RBP	10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	VWCE	Q96DN2	955 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	TMA16	Q96EY4	203 aa	Known RBP	10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	TBC1D10A	Q9BXI6	508 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	ZNF395	Q9H8N7	513 aa	Predicted RBP	10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	KCNK13	Q9HB14	408 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	IL23A	Q9NPF7	189 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	ASAH2	Q9NR71	780 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	MRGBP	Q9NV56	204 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	INTS10	Q9NVR2	710 aa	Known RBP	10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	PNPO	Q9NVS9	261 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	ARMCX1	Q9P291	453 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	CPQ	Q9Y646	472 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	ARL5A	Q9Y689	179 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	MYO9B	Q13459	2157 aa		10.8	□□□□□ -0.68
SPIDR-222	ENST00000524006	CCDC162P	A2VCL2	907 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	STX7	O15400	261 aa	Known RBP	10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	FGF18	O76093	207 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	RHOBTB1	O94844	696 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	PIGN	O95427	931 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	PYGL	P06737	847 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	PIRT	P0C851	137 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	CCDC166	P0CW27	439 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	LPO	P22079	712 aa	Predicted RBP	10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	MPST	P25325	297 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	PGM1	P36871	562 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	GMPR	P36959	345 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	PPARG	P37231	505 aa	Predicted RBP	10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	RPL14	P50914	215 aa	Known RBP	10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	AP1S1	P61966	158 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	KDSR	Q06136	332 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	CCDC6	Q16204	474 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	ARHGAP15	Q53QZ3	475 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	PPM1L	Q5SGD2	360 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	WASHC2D	Q5SRD0	308 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	RBM20	Q5T481	1227 aa	Known RBP	10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	ARTN	Q5T4W7	220 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	NXN	Q6DKJ4	435 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	TMCO2	Q7Z6W1	182 aa	Predicted RBP	10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	TTC7B	Q86TV6	843 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	RYBP	Q8N488	228 aa	Predicted RBP	10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	ARL14EP	Q8N8R7	260 aa	Predicted RBP	10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	DCAF4L2	Q8NA75	395 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	OR13J1	Q8NGT2	312 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	OR4L1	Q8NH43	312 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	TADA1	Q96BN2	335 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	CMTM5	Q96DZ9	223 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	SGF29	Q96ES7	293 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	PTCD3	Q96EY7	689 aa	Known RBP	10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	MYEOV	Q96EZ4	313 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	MYO19	Q96H55	970 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	TTC1	Q99614	292 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	OMD	Q99983	421 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	MCMBP	Q9BTE3	642 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	GATA5	Q9BWX5	397 aa	Predicted RBP	10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	TDRD1	Q9BXT4	1180 aa	Known RBP	10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	DRC3	Q9H069	523 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	POPDC3	Q9HBV1	291 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	TCF7L2	Q9NQB0	619 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	NOP53	Q9NZM5	478 aa	Known RBP	10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	CFAP97	Q9P2B7	532 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	TBC1D30	Q9Y2I9	924 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	VWA7	Q9Y334	891 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	PKP3	Q9Y446	797 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	RAI2	Q9Y5P3	530 aa		10.79	□□□□□ -0.68
SPIDR-222	ENST00000524006	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006		B2RBV5	119 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	CCL22	O00626	93 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	NEMP1	O14524	444 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	MUSK	O15146	869 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	HDAC3	O15379	428 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	TEX28	O15482	410 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	LDB2	O43679	373 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	VPS26A	O75436	327 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	SRP72	O76094	671 aa	Known RBP	10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	IGSF6	O95976	241 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	GLUD1	P00367	558 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	KLKB1	P03952	638 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	C8A	P07357	584 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	SPATA31D3	P0C874	917 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	CTSA	P10619	480 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	ALOX15	P16050	662 aa	Predicted RBP	10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms